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ATCC10864_005147-T1, ATCC10864_005147-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005147-T1
Unique NameATCC10864_005147-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:182433..183466-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005147-T1 ID=ATCC10864_005147-T1|Name=ATCC10864_005147-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1034bp|location=Sequence derived from alignment at MCQH01000140:182433..183466- (Aspergillus niger ATCC 10864)
ATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGAGTGAGACGCACCCCG
GAGAATTTTCTGCTGGCCTGCTTGACCATGCGGCCCAGACCTCGCAGCTT
CTGGAATCTTAACTAACGTATTCCTTGTTTTCCAGAGTCGGTGTTTTCTC
CCGTCTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACT
TCTACAGGTGCTTATATACCCGTTTCTGCCAGAACCACAAACCAGTCCCA
TTAACGCTCCTTCCAGTGTATTCGAGGCCGAATTGCAAGATGTCATTCCC
ATCTGCCACGCAACCATTGCCGGAACCCGCATCGTTGGCCGTCTGACGGC
AGGGTATGTCTAGATCCGATATCCATTTGGATCTCTGTATCAACCCCGCT
GACCATCTTGCCCCCAATATCAGAAACCGTAATGGTCTCCTCGTCCCCAC
CACCACGACAGACCAAGAGCTTCAACATCTCCGGAATACGCTACCCGAAT
CGGTAAAGATTCAACGTATAGAGGAACGTCTATCGGCTCTGGGGAACGTC
ATCTGCTGCAATGACCATGTTGCGCTGATCCACCCGGATCTCGAGCGGGA
AACCGAAGAGATGTATGTCGTGCTGCCAATATCTGCAAGTACTGCGCTCA
ATGCTAACATGCTAAACCAACAGCATCGCCGATGTCCTCGGTGTCGAAGT
CTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGGCCC
TCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGACCAG
GATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGTCAA
CCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGCTCG
CTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAAAGT
GTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGACGC
CAACAAGGAGAGTATTGTGGAGAGTTTCTACTAG
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Coding sequence (CDS) from alignment at MCQH01000140:182433..183466-

>ATCC10864_005147-T1 ID=ATCC10864_005147-T1|Name=ATCC10864_005147-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3720bp|location=Sequence derived from alignment at MCQH01000140:182433..183466- (Aspergillus niger ATCC 10864)
CATCGCCGATGTCCTCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGATA
ACGTCCTGACTGGCTCCTACATGGCCCTCTCCAACCAAGGTGGTATCGTC
CACCCCAAGACCTCCATCCGTGACCAGGATGAACTTTCCTCCCTCCTGCA
AGTGCCCCTCGTCGCTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTG
CCGGCATGGTCGTGAACGACTGGCTCGCTGTCACGGGTCTGGACACGACA
GCCACGGAATTGAGTGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGGG
TCCCCGTGGTGTTGGAATGGGCGACGCCAACAAGGAGAGTATTGTGGAGA
GTTTCTACTAGAAACCGTAATGGTCTCCTCGTCCCCACCACCACGACAGA
CCAAGAGCTTCAACATCTCCGGAATACGCTACCCGAATCGGTAAAGATTC
AACGTATAGAGGAACGTCTATCGGCTCTGGGGAACGTCATCTGCTGCAAT
GACCATGTTGCGCTGATCCACCCGGATCTCGAGCGGGAAACCGAAGAGAT
TGTATTCGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCA
TTGCCGGAACCCGCATCGTTGGCCGTCTGACGGCAGGAGTCGGTGTTTTC
TCCCGTCTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAA
CTTCTACAGATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGACATCGC
CGATGTCCTCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCC
TGACTGGCTCCTACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCC
AAGACCTCCATCCGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCC
CCTCGTCGCTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCA
TGGTCGTGAACGACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACG
GAATTGAGTGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCG
TGGTGTTGGAATGGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCT
ACTAGAAACCGTAATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGA
GCTTCAACATCTCCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTA
TAGAGGAACGTCTATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCAT
GTTGCGCTGATCCACCCGGATCTCGAGCGGGAAACCGAAGAGATTGTATT
CGAGGCCGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCG
GAACCCGCATCGTTGGCCGTCTGACGGCAGGAGTCGGTGTTTTCTCCCGT
CTCACCAACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTA
CAGATGGCGGTCCGCGCGCAGTTCGAGAACTCCAACGACATCGCCGATGT
CCTCGGTGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTG
GCTCCTACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACC
TCCATCCGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGT
CGCTGGTAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCG
TGAACGACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTG
AGTGTCATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGT
TGGAATGGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGA
AACCGTAATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCA
ACATCTCCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGG
AACGTCTATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCG
CTGATCCACCCGGATCTCGAGCGGGAAACCGAAGAGATTGTATTCGAGGC
CGAATTGCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCC
GCATCGTTGGCCGTCTGACGGCAGGAGTCGGTGTTTTCTCCCGTCTCACC
AACTCGTACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGATG
GCGGTCCGCGCGCAGTTCGAGAACTCCAACGACATCGCCGATGTCCTCGG
TGTCGAAGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCT
ACATGGCCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATC
CGTGACCAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGG
TAGTGTCAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACG
ACTGGCTCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTC
ATTGAAAGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAAT
GGGCGACGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGAAACCGT
AATGGTCTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCT
CCGGAATACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTC
TATCGGCTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATC
CACCCGGATCTCGAGCGGGAAACCGAAGAGATTGTATTCGAGGCCGAATT
GCAAGATGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCCGCATCG
TTGGCCGTCTGACGGCAGGAGTCGGTGTTTTCTCCCGTCTCACCAACTCG
TACGCTATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGATGGCGGTC
CGCGCGCAGTTCGAGAACTCCAACGACATCGCCGATGTCCTCGGTGTCGA
AGTCTTCCGTCAAACCGTCGCCGATAACGTCCTGACTGGCTCCTACATGG
CCCTCTCCAACCAAGGTGGTATCGTCCACCCCAAGACCTCCATCCGTGAC
CAGGATGAACTTTCCTCCCTCCTGCAAGTGCCCCTCGTCGCTGGTAGTGT
CAACCGCGGTAGCCCCGTCGTCGGTGCCGGCATGGTCGTGAACGACTGGC
TCGCTGTCACGGGTCTGGACACGACAGCCACGGAATTGAGTGTCATTGAA
AGTGTCTTCCGTCTGGGTGAGATGGGTCCCCGTGGTGTTGGAATGGGCGA
CGCCAACAAGGAGAGTATTGTGGAGAGTTTCTACTAGAAACCGTAATGGT
CTCCTCGTCCCCACCACCACGACAGACCAAGAGCTTCAACATCTCCGGAA
TACGCTACCCGAATCGGTAAAGATTCAACGTATAGAGGAACGTCTATCGG
CTCTGGGGAACGTCATCTGCTGCAATGACCATGTTGCGCTGATCCACCCG
GATCTCGAGCGGGAAACCGAAGAGATTGTATTCGAGGCCGAATTGCAAGA
TGTCATTCCCATCTGCCACGCAACCATTGCCGGAACCCGCATCGTTGGCC
GTCTGACGGCAGGAGTCGGTGTTTTCTCCCGTCTCACCAACTCGTACGCT
ATTGTTGCCATTGGCGCCTCCGAGAACTTCTACAGATGGCGGTCCGCGCG
CAGTTCGAGAACTCCAACGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
Vocabulary: Biological Process
TermDefinition
GO:0042256mature ribosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF6ATCC10864_005147Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005147-T1ATCC10864_005147-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005147-T1.cdsATCC10864_005147-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005147-T1.exon5ATCC10864_005147-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_005147-T1.exon4ATCC10864_005147-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005147-T1.exon3ATCC10864_005147-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005147-T1.exon2ATCC10864_005147-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005147-T1.exon1ATCC10864_005147-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01912
InterProIPR002769
Properties
Property NameValue
NoteBUSCO:EOG092644O2
ProductEukaryotic translation initiation factor 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:182433..183466 -
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