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ATCC10864_005181-T1, ATCC10864_005181-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005181-T1
Unique NameATCC10864_005181-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:304206..305207-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005181-T1 ID=ATCC10864_005181-T1|Name=ATCC10864_005181-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1002bp|location=Sequence derived from alignment at MCQH01000140:304206..305207- (Aspergillus niger ATCC 10864)
ATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCAG
TGAGTGCGACCGCAGAGATCCTGAAGCGAAATTCGCAGCATCTCCAGATC
AATTTTTACTGATACAATTTTTCGCTCGACAGCGGCAAACACCCGTCTCA
ACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGA
TACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGC
TCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCA
CCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATTCGTCTAC
GCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTC
CGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACC
GTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCGGCCAC
AACCCCGAGGAGGGCAAGACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAA
GGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTG
GTCGTACCGACAAGCCTTTGCTGAGTATGTCTCCGGAAATCTGGCTCCGT
TGAATCACTTTTCGGAGAGAATGCGGTTAAAGAAGAGGACTTTGATGGCT
AATTCATTCCCTACAGAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTCAA
GCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGATC
ACGTAAGGCTCCCTCCAATGATTTGGTCGATTTATCTACAGATTCTGACA
TGTTTTCTCTACAGCCTCACGGTGGTGGTAACCACCAGCACATTGGTAAG
GCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTAT
CGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAGT
AA
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Coding sequence (CDS) from alignment at MCQH01000140:304206..305207-

>ATCC10864_005181-T1 ID=ATCC10864_005181-T1|Name=ATCC10864_005181-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3060bp|location=Sequence derived from alignment at MCQH01000140:304206..305207- (Aspergillus niger ATCC 10864)
CCTCACGGTGGTGGTAACCACCAGCACATTGGTAAGGCCTCGACCATCTC
CCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCCCGGAGAA
CTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAGTAAAGGCTTCTCGCG
CCAAGCACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGTGGT
GTTGCCATGAACCCCGTGGATCACCGGCAAACACCCGTCTCAACAAGGCT
CCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGATACACTCG
TGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGCTCCCCTCG
CCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCACCGAGACC
TTCATCGCCAACGAGGGCATGTACACCGGTCAATTCGTCTACGCCGGAAA
GAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGTCCCTG
AGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTGGTGCT
CTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCGGCCACAACCCCGA
GGAGGGCAAGACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAAGGTCGTCA
AGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTCGTACC
GACAAGCCTTTGCTGAATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTC
GTGGATCCATTTTCACCTCACGGTGGTGGTAACCACCAGCACATTGGTAA
GGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTA
TCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAG
TAAAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTCAAGCGCAACTCTTGG
CCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGATCACCGGCAAACACC
CGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCG
TCATGGATACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCC
GTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAG
ACCATCACCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATT
CGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCC
TCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCT
GGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCAT
CGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCAAGCTCCCCTCCGGTG
CCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCT
GGTGGTGGTCGTACCGACAAGCCTTTGCTGAATGGGTCGCGTGATCCGCA
ACCAGAGGAAGGGTCGTGGATCCATTTTCACCTCACGGTGGTGGTAACCA
CCAGCACATTGGTAAGGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTC
AAAAAGCCGGTCTTATCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACC
CAGAAGACCAAGGAGTAAAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTC
AAGCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGA
TCACCGGCAAACACCCGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCT
CGACTACGCCGAGCGTCATGGATACACTCGTGGTGTCGTGAAGGAGATCA
TCCACGACCCCGGCCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCAC
CCCTACAAGTTCAAGACCATCACCGAGACCTTCATCGCCAACGAGGGCAT
GTACACCGGTCAATTCGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCG
GAAACGTCCTTCCCCTCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAAC
GTCGAGGAGAAGGCTGGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAA
CTACGTTACCGTCATCGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCA
AGCTCCCCTCCGGTGCCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATG
ATCGGTATCGTCGCTGGTGGTGGTCGTACCGACAAGCCTTTGCTGAATGG
GTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCACCTCA
CGGTGGTGGTAACCACCAGCACATTGGTAAGGCCTCGACCATCTCCCGCT
ACGCTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCCCGGAGAACTGGT
CTGCTCCGTGGTACCCAGAAGACCAAGGAGTAAAGGCTTCTCGCGCCAAG
CACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGTGGTGTTGC
CATGAACCCCGTGGATCACCGGCAAACACCCGTCTCAACAAGGCTCCTGC
CCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGATACACTCGTGGTG
TCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGCTCCCCTCGCCAAG
GTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCACCGAGACCTTCAT
CGCCAACGAGGGCATGTACACCGGTCAATTCGTCTACGCCGGAAAGAACG
CCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGTCCCTGAGGGT
ACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTGGTGCTCTTGG
TCGTACCTCCGGTAACTACGTTACCGTCATCGGCCACAACCCCGAGGAGG
GCAAGACCCGTGTCAAGCTCCCCTCCGGTGCCAAGAAGGTCGTCAAGAAC
ACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTCGTACCGACAA
GCCTTTGCTGAATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGA
TCCATTTTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL2ATCC10864_005181Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005181-T1ATCC10864_005181-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005181-T1.cdsATCC10864_005181-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005181-T1.exon4ATCC10864_005181-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005181-T1.exon3ATCC10864_005181-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005181-T1.exon2ATCC10864_005181-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005181-T1.exon1ATCC10864_005181-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR022671
PFAMPF03947
InterProIPR022669
InterProIPR012340
InterProIPR008991
InterProIPR002171
InterProIPR022666
PFAMPF00181
InterProIPR014722
InterProIPR014726
Properties
Property NameValue
Product60S ribosomal protein L2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:304206..305207 -
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