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ATCC10864_005197-T1, ATCC10864_005197-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005197-T1
Unique NameATCC10864_005197-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:357673..359214+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005197-T1 ID=ATCC10864_005197-T1|Name=ATCC10864_005197-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1542bp|location=Sequence derived from alignment at MCQH01000140:357673..359214+ (Aspergillus niger ATCC 10864)
ATGCCTCCCCGGAAGCAGTGGATGTAGGTTGCCCCTCCACATTCACCTAC
TCAAATCTATGTACCCAACTAACCCACTCTCAGCGACAAGAAAACCGCAA
CTACCTACCAACTCTTCCACCGTTCCCAACATGACCCTCTCATTCACGAT
CCCTCTGCTGACGACCGCGTCCTGCACCCTGTCTACGGTCCTCCCATCAC
CCCCAGTGAATCTTCCTCCGCCTCCAAGCACCGCGGCCAAAGTCTCGCCG
AGCTGAATCAAACCTTCGGCGATGCCGCGCGCAAAAACGAAGGTGAAGCC
GCCAACTACGGCATTTTCTACGATGACTCGCAATACGACTACATGCAGCA
CTTGCGCGAGCTGGGCACCGGCGCCGGCGACGCTTACTTCGTCGAAGCCA
AGACGAAGGGCAAGGACAAGGGCAAAGGATTGAAGCTGGAGGATGCTTTG
AAACAGGTATCGCTGGATGATGGGCGAAGCGAGTTTGGTGGCACCGAAAG
CGTCTACAGCTATGACATGCGCTCGACGGCGTCTTCCTACGTGCGCAAAC
CCACCTACCAGGACCAGCAGAACGTGCCCGATGCTATTGCGGGTTTCCAG
CCGGATATGGACCCGCGGTTGCGCGAAGCCTTGGAGGCGCTGGAGGACGA
GGAGTACGTGGATGAAGATGACGAGGAGGACGTCTTCGGCCAGTTGACTA
CGCGGGCAGAGGAAATGGACCAGGGTGATTGGGAGGATACCATCTTCGAC
GATGTCGAGGAAGAAGACGATGGATGGGAATCCGATGCGACAGAAAAGGC
CCCCGTGCAGATGGACACCACGGCCGCAAAGGCCCGCTACCAAGCCTCAG
AGCAGGAGGATAAGCCCGGCGAGCTTCCCGAACACAACGAGCCCGCGCCC
GACATGCACCCCGAAGACCAAGGCTGGATGCGCGAATTCGCCAAGTTCAA
GAAGGACGCCAAGTCTGGCAAAACAGCCGGCGTCCCCGCCGGTCCTCCCA
GCGTCGTCCCCTCCCATCAGGGCAGCACCCTCGCCTCGACCGTGTTCACC
GTCGGAGGCACCCCCATCCGCCGCAAGAAGCGCAAGGGCGCCCTCACCAA
CCCCTCCGCCTACTCCATGACTTCGTCCTCCCTCGCCCGTACAGAAGGCC
ACCGTCTCCTCGACGACCGCTTCGAGCGCGTCGAAGCCCTCTACTCCCTC
GACGAGGAGGATGAGTTCGACGACAACATGTCCATGGTCAGTGGAATGAC
CGGTATGACCGGTATGACTGGTGTCTCGGGCATTTCGACTGCCTCGTCTC
AGGCACCGAGTCTCGTTGACGCGAACGGTGATGCCGTTCGTCCTTCCCAC
AACTTCAACAACATCATGGATGATTTCCTTGCTGGGTGGGATGACAAGAC
GAGTTCCCAGGCTAAGCGGAAGGGCGCAAAGGCGAAGCGCGGAAAGAACG
GTAATGAGGCGATTGGCATTCGCATGCTGGATGAGGTTCGGCAGGGATTG
GGCCCTGCTAGGGTTACTGGGAAGGTGTCGGGCAGGGCGTAG
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Coding sequence (CDS) from alignment at MCQH01000140:357673..359214+

>ATCC10864_005197-T1 ID=ATCC10864_005197-T1|Name=ATCC10864_005197-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2964bp|location=Sequence derived from alignment at MCQH01000140:357673..359214+ (Aspergillus niger ATCC 10864)
ATGCCTCCCCGGAAGCAGTGGATCGACAAGAAAACCGCAACTACCTACCA
ACTCTTCCACCGTTCCCAACATGACCCTCTCATTCACGATCCCTCTGCTG
ACGACCGCGTCCTGCACCCTGTCTACGGTCCTCCCATCACCCCCAGTGAA
TCTTCCTCCGCCTCCAAGCACCGCGGCCAAAGTCTCGCCGAGCTGAATCA
AACCTTCGGCGATGCCGCGCGCAAAAACGAAGGTGAAGCCGCCAACTACG
GCATTTTCTACGATGACTCGCAATACGACTACATGCAGCACTTGCGCGAG
CTGGGCACCGGCGCCGGCGACGCTTACTTCGTCGAAGCCAAGACGAAGGG
CAAGGACAAGGGCAAAGGATTGAAGCTGGAGGATGCTTTGAAACAGGTAT
CGCTGGATGATGGGCGAAGCGAGTTTGGTGGCACCGAAAGCGTCTACAGC
TATGACATGCGCTCGACGGCGTCTTCCTACGTGCGCAAACCCACCTACCA
GGACCAGCAGAACGTGCCCGATGCTATTGCGGGTTTCCAGCCGGATATGG
ACCCGCGGTTGCGCGAAGCCTTGGAGGCGCTGGAGGACGAGGAGTACGTG
GATGAAGATGACGAGGAGGACGTCTTCGGCCAGTTGACTACGCGGGCAGA
GGAAATGGACCAGGGTGATTGGGAGGATACCATCTTCGACGATGTCGAGG
AAGAAGACGATGGATGGGAATCCGATGCGACAGAAAAGGCCCCCGTGCAG
ATGGACACCACGGCCGCAAAGGCCCGCTACCAAGCCTCAGAGCAGGAGGA
TAAGCCCGGCGAGCTTCCCGAACACAACGAGCCCGCGCCCGACATGCACC
CCGAAGACCAAGGCTGGATGCGCGAATTCGCCAAGTTCAAGAAGGACGCC
AAGTCTGGCAAAACAGCCGGCGTCCCCGCCGGTCCTCCCAGCGTCGTCCC
CTCCCATCAGGGCAGCACCCTCGCCTCGACCGTGTTCACCGTCGGAGGCA
CCCCCATCCGCCGCAAGAAGCGCAAGGGCGCCCTCACCAACCCCTCCGCC
TACTCCATGACTTCGTCCTCCCTCGCCCGTACAGAAGGCCACCGTCTCCT
CGACGACCGCTTCGAGCGCGTCGAAGCCCTCTACTCCCTCGACGAGGAGG
ATGAGTTCGACGACAACATGTCCATGGTCAGTGGAATGACCGGTATGACC
GGTATGACTGGTGTCTCGGGCATTTCGACTGCCTCGTCTCAGGCACCGAG
TCTCGTTGACGCGAACGGTGATGCCGTTCGTCCTTCCCACAACTTCAACA
ACATCATGGATGATTTCCTTGCTGGGTGGGATGACAAGACGAGTTCCCAG
GCTAAGCGGAAGGGCGCAAAGGCGAAGCGCGGAAAGAACGGTAATGAGGC
GATTGGCATTCGCATGCTGGATGAGGTTCGGCAGGGATTGGGCCCTGCTA
GGGTTACTGGGAAGGTGTCGGGCAGGGCGTAGATGCCTCCCCGGAAGCAG
TGGATCGACAAGAAAACCGCAACTACCTACCAACTCTTCCACCGTTCCCA
ACATGACCCTCTCATTCACGATCCCTCTGCTGACGACCGCGTCCTGCACC
CTGTCTACGGTCCTCCCATCACCCCCAGTGAATCTTCCTCCGCCTCCAAG
CACCGCGGCCAAAGTCTCGCCGAGCTGAATCAAACCTTCGGCGATGCCGC
GCGCAAAAACGAAGGTGAAGCCGCCAACTACGGCATTTTCTACGATGACT
CGCAATACGACTACATGCAGCACTTGCGCGAGCTGGGCACCGGCGCCGGC
GACGCTTACTTCGTCGAAGCCAAGACGAAGGGCAAGGACAAGGGCAAAGG
ATTGAAGCTGGAGGATGCTTTGAAACAGGTATCGCTGGATGATGGGCGAA
GCGAGTTTGGTGGCACCGAAAGCGTCTACAGCTATGACATGCGCTCGACG
GCGTCTTCCTACGTGCGCAAACCCACCTACCAGGACCAGCAGAACGTGCC
CGATGCTATTGCGGGTTTCCAGCCGGATATGGACCCGCGGTTGCGCGAAG
CCTTGGAGGCGCTGGAGGACGAGGAGTACGTGGATGAAGATGACGAGGAG
GACGTCTTCGGCCAGTTGACTACGCGGGCAGAGGAAATGGACCAGGGTGA
TTGGGAGGATACCATCTTCGACGATGTCGAGGAAGAAGACGATGGATGGG
AATCCGATGCGACAGAAAAGGCCCCCGTGCAGATGGACACCACGGCCGCA
AAGGCCCGCTACCAAGCCTCAGAGCAGGAGGATAAGCCCGGCGAGCTTCC
CGAACACAACGAGCCCGCGCCCGACATGCACCCCGAAGACCAAGGCTGGA
TGCGCGAATTCGCCAAGTTCAAGAAGGACGCCAAGTCTGGCAAAACAGCC
GGCGTCCCCGCCGGTCCTCCCAGCGTCGTCCCCTCCCATCAGGGCAGCAC
CCTCGCCTCGACCGTGTTCACCGTCGGAGGCACCCCCATCCGCCGCAAGA
AGCGCAAGGGCGCCCTCACCAACCCCTCCGCCTACTCCATGACTTCGTCC
TCCCTCGCCCGTACAGAAGGCCACCGTCTCCTCGACGACCGCTTCGAGCG
CGTCGAAGCCCTCTACTCCCTCGACGAGGAGGATGAGTTCGACGACAACA
TGTCCATGGTCAGTGGAATGACCGGTATGACCGGTATGACTGGTGTCTCG
GGCATTTCGACTGCCTCGTCTCAGGCACCGAGTCTCGTTGACGCGAACGG
TGATGCCGTTCGTCCTTCCCACAACTTCAACAACATCATGGATGATTTCC
TTGCTGGGTGGGATGACAAGACGAGTTCCCAGGCTAAGCGGAAGGGCGCA
AAGGCGAAGCGCGGAAAGAACGGTAATGAGGCGATTGGCATTCGCATGCT
GGATGAGGTTCGGCAGGGATTGGGCCCTGCTAGGGTTACTGGGAAGGTGT
CGGGCAGGGCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042274ribosomal small subunit biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005197ATCC10864_005197Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005197-T1.exon1ATCC10864_005197-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005197-T1.exon2ATCC10864_005197-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005197-T1.cdsATCC10864_005197-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005197-T1ATCC10864_005197-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04180
InterProIPR007307
Properties
Property NameValue
NoteBUSCO:EOG09262VVF
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:357673..359214 +
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