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ATCC10864_005234-T1, ATCC10864_005234-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005234-T1
Unique NameATCC10864_005234-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:461633..462930+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005234-T1 ID=ATCC10864_005234-T1|Name=ATCC10864_005234-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1298bp|location=Sequence derived from alignment at MCQH01000140:461633..462930+ (Aspergillus niger ATCC 10864)
ATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGG
CCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACA
TCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTT
CTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTG
TATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGT
TCGTAGAGAGAGTCAAGCAATGTAAGTCCCGTCCACTTGTATCTCAACCA
TCTACATGCATCTGGGCGCTGACCCCCTCCAAGTCAAAGATGTACACAAA
GCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGG
CCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACCACA
ACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCA
TCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGA
GGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGG
AACAATCCCTAACGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAACG
GGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAA
CGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAGCAATCAGCCG
GCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAA
GAACGTAAGCACTCCACCACCCCCATACCTAAAACCAAAACCAAAGTCCA
TCACTAACCAAAACCACCCCACACAGTAATCGCCAGCCTCACCACTCGCC
TCAACGCCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTAC
GTCGCGAGCATCTCCACCTCCGATCCAGAAACCCCCACCTCAACAACAAC
CCTCTCCCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCT
CCCTTCTCACCCCTGATGAACGAAGCGCCTTCACGGCCGAAGCCATCGCC
CAGAGCAACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAG
CATCAGCGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTG
TCAGACGGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAAT
CGGTTCACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
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Coding sequence (CDS) from alignment at MCQH01000140:461633..462930+

>ATCC10864_005234-T1 ID=ATCC10864_005234-T1|Name=ATCC10864_005234-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3492bp|location=Sequence derived from alignment at MCQH01000140:461633..462930+ (Aspergillus niger ATCC 10864)
ATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGG
CCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACA
TCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTT
CTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTG
TATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGT
TCGTAGAGAGAGTCAAGCAATTCAAAGATGTACACAAAGCTCCTGCCCTT
GACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCGT
CCACCTCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCCG
TGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGGC
GGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATGC
GACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTAA
CGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAACGGGGGAAGCCGAG
ATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAGA
CACACAAGGCACGGCCTCTCTCACAAAGCAATCAGCCGGCAAAGAACCCA
GCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACTAATCGCC
AGCCTCACCACTCGCCTCAACGCCATCAAGACCCTCGAATCCCGTATCTC
CCTCATCAAATCCTACGTCGCGAGCATCTCCACCTCCGATCCAGAAACCC
CCACCTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACATCAACGCT
CTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAACGAAGCGCCTTCAC
GGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCTCGTCTCCCTATTAG
GACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGCTCGGGAAACGAACT
GCGCTGATGAACAGTGTCAGACGGACGATGATGTCGCGGAAAACGCAACA
ATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTCGACTGGGGATGGGG
TGAGTCATGGATAGATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAG
AACTCCGACTCCGGCCTCCATATCCAGCTCCACCCTCTGATCCTCCTGAC
CATCTCAGACCACATCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTA
TAGTGGGAGCGCTTCTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAA
CACGTCTTTGAGTGTATTGTGAACGAGGGCCCCAATGGAGATCTGCAGAT
TCCGCAGGACTGGTTCGTAGAGAGAGTCAAGCAATTCAAAGATGTACACA
AAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCC
GGCCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACCA
CAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATG
CATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATAC
GAGGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGA
GGAACAATCCCTAACGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAA
CGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGA
AACGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAGCAATCAGC
CGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAG
AAGAACTAATCGCCAGCCTCACCACTCGCCTCAACGCCATCAAGACCCTC
GAATCCCGTATCTCCCTCATCAAATCCTACGTCGCGAGCATCTCCACCTC
CGATCCAGAAACCCCCACCTCAACAACAACCCTCTCCCACCCCATCCTCC
GCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAA
CGAAGCGCCTTCACGGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCT
CGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGC
TCGGGAAACGAACTGCGCTGATGAACAGTGTCAGACGGACGATGATGTCG
CGGAAAACGCAACAATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTC
GACTGGGGATGGGGTGAGTCATGGATAGATGTCTGATCAGCCGGAATCCC
TCCTATCTCCGAAGAACTCCGACTCCGGCCTCCATATCCAGCTCCACCCT
CTGATCCTCCTGACCATCTCAGACCACATCACCCGCCATGCCGCCCGCTC
TCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCCAGCAGAACGGACGCG
AAATCACCTTGGAACACGTCTTTGAGTGTATTGTGAACGAGGGCCCCAAT
GGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGAGAGAGTCAAGCAATT
CAAAGATGTACACAAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAA
CTGCTCCCCCGTCCGGCCCCAACACCGTCCACCTCCCAATCCATCGCCAG
ATCCTCCACAACCACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATC
CCTGGTACAAGATGCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCT
ACGAAAGCGTATACGAGGGCGAAAATGCGACAGAGAACAGCAAGACAATG
CAGGTTGATGGAGAGGAACAATCCCTAACGATTCGCTTCCGAGAATTGCC
CTACTCCGTCGAAACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAG
CAAGGACAGCCAGAAACGCCGCCGCAGACACACAAGGCACGGCCTCTCTC
ACAAAGCAATCAGCCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCT
CTCCCCCGAGGAAGAAGAACTAATCGCCAGCCTCACCACTCGCCTCAACG
CCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCGCG
AGCATCTCCACCTCCGATCCAGAAACCCCCACCTCAACAACAACCCTCTC
CCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTC
TCACCCCTGATGAACGAAGCGCCTTCACGGCCGAAGCCATCGCCCAGAGC
AACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAG
CGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAGAC
GGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGTTC
ACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0070122isopeptidase activity
GO:0008237metallopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005234ATCC10864_005234Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005234-T1.exon1ATCC10864_005234-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005234-T1.exon2ATCC10864_005234-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005234-T1.exon3ATCC10864_005234-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005234-T1.cdsATCC10864_005234-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005234-T1ATCC10864_005234-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000555
InterProIPR037518
InterProIPR024969
PFAMPF01398
InterProIPR033859
PFAMPF13012
Properties
Property NameValue
NoteMEROPS:MER0030137
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:461633..462930 +
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