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ATCC10864_005247-T1, ATCC10864_005247-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005247-T1
Unique NameATCC10864_005247-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:497387..499263+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005247-T1 ID=ATCC10864_005247-T1|Name=ATCC10864_005247-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1877bp|location=Sequence derived from alignment at MCQH01000140:497387..499263+ (Aspergillus niger ATCC 10864)
ATGGACTATTCCGCCATATCAAACGATCCTGATCATCCTGCGGGCACTTC
TCCATGGGCTTCACCTCGCCCGACCCAAACAACCTTTCCGGCTTCCGTGA
CTAGCGACATCCCCCCTGCCCCCATGACTCCCCAAGATCCCTACAATGCC
GAATCGCAGCCTACCGAAACTCCTGGGTTCCAGGAGAACGAGATTGGATC
GCCCGACTTGTCTGCGCGACTGCAGGGTGCACAACTGGGTGAGCCGGGCT
ATGTTGATGAGCACTCGCAACACACTCAGCAGCAGCATGGACAACAGCCT
CGCTCTCAGCTCCCCGCCCGCTACCAAACGGGCCCAAGACAGAATCCCAG
ACAACCCGCACCTGTGTATAGAATCCAGGCGAAAGTCACGGGGCTAGAGA
GAACGGGCAAGAAGGACCCTATTCTTCGATTTGATGTTCACGTGAGCGAT
ATCCTTTTCTTGCCTCGCCCTGCGCCTACTGATTACAGGCTCCAGACGAA
TATCCCCAAGTTTAGGACAACACAGTATCGAGACGTTCGTCGTACCCATG
CCGAGTTTGTCAAGCTTGCGGACCATCTGATTTCGGCTAACCCGGAAGCG
TTGGTTCCTGCGGTCCCCCCACCACTTACCCCTGCCGGCGCTGGAACCGA
AGAGGATGAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGTTGAATGTTG
TATTGAGCAATGAAGTTCTCATCCATGACGATGAGGTGGTCCTGTTCGTT
GAGAGTGATTTCGGTTACAGTCCTGTAGTTCGGATGAAACAACCTGCGAC
TGGGGTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCCCCGATGACA
CACCCGAATTACAAAATGCGCGTCCGATTGTAAAGATGTTCTATCTTGGA
ACAATGGATACTAGTCACAAGGTTGACCGTGTCGTCAAAGCCCGTCGAGG
TATGCGCCAGGGATTCGTATCTCATGATCATGGGAACTAACATTGGGCTA
TCCAGGACTCGGTCTCGCAGAATCCGACTTTGGTGTTAAGTTAGGCCAGA
TGCACGTGCAAGAGACGCACCCTGGACTGTCAAATGCATACCGGAAATTG
GGAAAGATCATCCAAACGGTCGGGGATTTCCATGCCGTCCAGGCGACTGC
GGAGGCCACAACACTGGGGGATCCGCTAAGCTACCACTCGTCCGATGCCT
TTATTGTCAAGGAGACTCTTACAAATCGCCACATCCTCCTTCGTGATTTG
ATCCAAGCTCAACAGGCAACAAGGAGCAAACGCGCCGCCGCTGATCGCCT
CAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGGCCATCAATG
CCCTGGATGAGGCTCAGGGCCACGAGGACTACCTGACGAAGCGAACACAG
CGGGTTACGTCGAACTTACTCGCCGAGAAGCAACGTTGGTTTGACCGGAC
GACTAACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGCGCCAGATTG
AATCCGAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGACCTGATATT
CGAGCCATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACGTGAATCCCA
CCCAACCGCTCGCCGACCTAACCTTGGTTCAAGTCAAGGCCCCAAGGGGG
ATGCTTGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGCCGGAGTCTC
AGTGGCAGTTTCGTTGCACCCACCCCAACTGAAGACGACGAAGAAGTCAA
CGGACACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGTGTGAGCT
CGATTGTGGAGGAAGACGACGATGATCGCCTTGACGCTCGTAACGCGGCT
AGTCGCCTGGCCACGAGCACTTTCTAA
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Coding sequence (CDS) from alignment at MCQH01000140:497387..499263+

>ATCC10864_005247-T1 ID=ATCC10864_005247-T1|Name=ATCC10864_005247-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5301bp|location=Sequence derived from alignment at MCQH01000140:497387..499263+ (Aspergillus niger ATCC 10864)
ATGGACTATTCCGCCATATCAAACGATCCTGATCATCCTGCGGGCACTTC
TCCATGGGCTTCACCTCGCCCGACCCAAACAACCTTTCCGGCTTCCGTGA
CTAGCGACATCCCCCCTGCCCCCATGACTCCCCAAGATCCCTACAATGCC
GAATCGCAGCCTACCGAAACTCCTGGGTTCCAGGAGAACGAGATTGGATC
GCCCGACTTGTCTGCGCGACTGCAGGGTGCACAACTGGGTGAGCCGGGCT
ATGTTGATGAGCACTCGCAACACACTCAGCAGCAGCATGGACAACAGCCT
CGCTCTCAGCTCCCCGCCCGCTACCAAACGGGCCCAAGACAGAATCCCAG
ACAACCCGCACCTGTGTATAGAATCCAGGCGAAAGTCACGGGGCTAGAGA
GAACGGGCAAGAAGGACCCTATTCTTCGATTTGATGTTCACACGAATATC
CCCAAGTTTAGGACAACACAGTATCGAGACGTTCGTCGTACCCATGCCGA
GTTTGTCAAGCTTGCGGACCATCTGATTTCGGCTAACCCGGAAGCGTTGG
TTCCTGCGGTCCCCCCACCACTTACCCCTGCCGGCGCTGGAACCGAAGAG
GATGAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGTTGAATGTTGTATT
GAGCAATGAAGTTCTCATCCATGACGATGAGGTGGTCCTGTTCGTTGAGA
GTGATTTCGGTTACAGTCCTGTAGTTCGGATGAAACAACCTGCGACTGGG
GTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCCCCGATGACACACC
CGAATTACAAAATGCGCGTCCGATTGTAAAGATGTTCTATCTTGGAACAA
TGGATACTAGTCACAAGGTTGACCGTGTCGTCAAAGCCCGTCGAGGACTC
GGTCTCGCAGAATCCGACTTTGGTGTTAAGTTAGGCCAGATGCACGTGCA
AGAGACGCACCCTGGACTGTCAAATGCATACCGGAAATTGGGAAAGATCA
TCCAAACGGTCGGGGATTTCCATGCCGTCCAGGCGACTGCGGAGGCCACA
ACACTGGGGGATCCGCTAAGCTACCACTCGTCCGATGCCTTTATTGTCAA
GGAGACTCTTACAAATCGCCACATCCTCCTTCGTGATTTGATCCAAGCTC
AACAGGCAACAAGGAGCAAACGCGCCGCCGCTGATCGCCTCAAAGTCAGT
TCCTCCGTCCGCCCGGACAAGGTGGACGAGGCCATCAATGCCCTGGATGA
GGCTCAGGGCCACGAGGACTACCTGACGAAGCGAACACAGCGGGTTACGT
CGAACTTACTCGCCGAGAAGCAACGTTGGTTTGACCGGACGACTAACGAC
ATGCTGGCCAGCCTCCGCGAGTATACGCTGCGCCAGATTGAATCCGAACG
GAGGACCCTCGCTACCTTGGAGAGTGTGCGACCTGATATTCGAGCCATTG
ACGCTTCGGGAGGACTCAGCCGTCTAGGACGTGAATCCCACCCAACCGCT
CGCCGACCTAACCTTGGTTCAAGTCAAGGCCCCAAGGGGGATGCTTGGAG
CGGCATACCGCGTCGCAGCGACAGCCTTGGCCGGAGTCTCAGTGGCAGTT
TCGTTGCACCCACCCCAACTGAAGACGACGAAGAAGTCAACGGACACGGC
ACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGTGTGAGCTCGATTGTGGA
GGAAGACGACGATGATCGCCTTGACGCTCGTAACGCGGCTAGTCGCCTGG
CCACGAGCACTTTCTAAATGGACTATTCCGCCATATCAAACGATCCTGAT
CATCCTGCGGGCACTTCTCCATGGGCTTCACCTCGCCCGACCCAAACAAC
CTTTCCGGCTTCCGTGACTAGCGACATCCCCCCTGCCCCCATGACTCCCC
AAGATCCCTACAATGCCGAATCGCAGCCTACCGAAACTCCTGGGTTCCAG
GAGAACGAGATTGGATCGCCCGACTTGTCTGCGCGACTGCAGGGTGCACA
ACTGGGTGAGCCGGGCTATGTTGATGAGCACTCGCAACACACTCAGCAGC
AGCATGGACAACAGCCTCGCTCTCAGCTCCCCGCCCGCTACCAAACGGGC
CCAAGACAGAATCCCAGACAACCCGCACCTGTGTATAGAATCCAGGCGAA
AGTCACGGGGCTAGAGAGAACGGGCAAGAAGGACCCTATTCTTCGATTTG
ATGTTCACACGAATATCCCCAAGTTTAGGACAACACAGTATCGAGACGTT
CGTCGTACCCATGCCGAGTTTGTCAAGCTTGCGGACCATCTGATTTCGGC
TAACCCGGAAGCGTTGGTTCCTGCGGTCCCCCCACCACTTACCCCTGCCG
GCGCTGGAACCGAAGAGGATGAAATCAGAGTCAAGTCGTCTTTGCAACGG
TGGTTGAATGTTGTATTGAGCAATGAAGTTCTCATCCATGACGATGAGGT
GGTCCTGTTCGTTGAGAGTGATTTCGGTTACAGTCCTGTAGTTCGGATGA
AACAACCTGCGACTGGGGTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCA
CCCCCCGATGACACACCCGAATTACAAAATGCGCGTCCGATTGTAAAGAT
GTTCTATCTTGGAACAATGGATACTAGTCACAAGGTTGACCGTGTCGTCA
AAGCCCGTCGAGGACTCGGTCTCGCAGAATCCGACTTTGGTGTTAAGTTA
GGCCAGATGCACGTGCAAGAGACGCACCCTGGACTGTCAAATGCATACCG
GAAATTGGGAAAGATCATCCAAACGGTCGGGGATTTCCATGCCGTCCAGG
CGACTGCGGAGGCCACAACACTGGGGGATCCGCTAAGCTACCACTCGTCC
GATGCCTTTATTGTCAAGGAGACTCTTACAAATCGCCACATCCTCCTTCG
TGATTTGATCCAAGCTCAACAGGCAACAAGGAGCAAACGCGCCGCCGCTG
ATCGCCTCAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGGCC
ATCAATGCCCTGGATGAGGCTCAGGGCCACGAGGACTACCTGACGAAGCG
AACACAGCGGGTTACGTCGAACTTACTCGCCGAGAAGCAACGTTGGTTTG
ACCGGACGACTAACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGCGC
CAGATTGAATCCGAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGACC
TGATATTCGAGCCATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACGTG
AATCCCACCCAACCGCTCGCCGACCTAACCTTGGTTCAAGTCAAGGCCCC
AAGGGGGATGCTTGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGCCG
GAGTCTCAGTGGCAGTTTCGTTGCACCCACCCCAACTGAAGACGACGAAG
AAGTCAACGGACACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGT
GTGAGCTCGATTGTGGAGGAAGACGACGATGATCGCCTTGACGCTCGTAA
CGCGGCTAGTCGCCTGGCCACGAGCACTTTCTAAATGGACTATTCCGCCA
TATCAAACGATCCTGATCATCCTGCGGGCACTTCTCCATGGGCTTCACCT
CGCCCGACCCAAACAACCTTTCCGGCTTCCGTGACTAGCGACATCCCCCC
TGCCCCCATGACTCCCCAAGATCCCTACAATGCCGAATCGCAGCCTACCG
AAACTCCTGGGTTCCAGGAGAACGAGATTGGATCGCCCGACTTGTCTGCG
CGACTGCAGGGTGCACAACTGGGTGAGCCGGGCTATGTTGATGAGCACTC
GCAACACACTCAGCAGCAGCATGGACAACAGCCTCGCTCTCAGCTCCCCG
CCCGCTACCAAACGGGCCCAAGACAGAATCCCAGACAACCCGCACCTGTG
TATAGAATCCAGGCGAAAGTCACGGGGCTAGAGAGAACGGGCAAGAAGGA
CCCTATTCTTCGATTTGATGTTCACACGAATATCCCCAAGTTTAGGACAA
CACAGTATCGAGACGTTCGTCGTACCCATGCCGAGTTTGTCAAGCTTGCG
GACCATCTGATTTCGGCTAACCCGGAAGCGTTGGTTCCTGCGGTCCCCCC
ACCACTTACCCCTGCCGGCGCTGGAACCGAAGAGGATGAAATCAGAGTCA
AGTCGTCTTTGCAACGGTGGTTGAATGTTGTATTGAGCAATGAAGTTCTC
ATCCATGACGATGAGGTGGTCCTGTTCGTTGAGAGTGATTTCGGTTACAG
TCCTGTAGTTCGGATGAAACAACCTGCGACTGGGGTTCGAAGGAAGGTCT
TGAAGCAGTTCGCGCCACCCCCCGATGACACACCCGAATTACAAAATGCG
CGTCCGATTGTAAAGATGTTCTATCTTGGAACAATGGATACTAGTCACAA
GGTTGACCGTGTCGTCAAAGCCCGTCGAGGACTCGGTCTCGCAGAATCCG
ACTTTGGTGTTAAGTTAGGCCAGATGCACGTGCAAGAGACGCACCCTGGA
CTGTCAAATGCATACCGGAAATTGGGAAAGATCATCCAAACGGTCGGGGA
TTTCCATGCCGTCCAGGCGACTGCGGAGGCCACAACACTGGGGGATCCGC
TAAGCTACCACTCGTCCGATGCCTTTATTGTCAAGGAGACTCTTACAAAT
CGCCACATCCTCCTTCGTGATTTGATCCAAGCTCAACAGGCAACAAGGAG
CAAACGCGCCGCCGCTGATCGCCTCAAAGTCAGTTCCTCCGTCCGCCCGG
ACAAGGTGGACGAGGCCATCAATGCCCTGGATGAGGCTCAGGGCCACGAG
GACTACCTGACGAAGCGAACACAGCGGGTTACGTCGAACTTACTCGCCGA
GAAGCAACGTTGGTTTGACCGGACGACTAACGACATGCTGGCCAGCCTCC
GCGAGTATACGCTGCGCCAGATTGAATCCGAACGGAGGACCCTCGCTACC
TTGGAGAGTGTGCGACCTGATATTCGAGCCATTGACGCTTCGGGAGGACT
CAGCCGTCTAGGACGTGAATCCCACCCAACCGCTCGCCGACCTAACCTTG
GTTCAAGTCAAGGCCCCAAGGGGGATGCTTGGAGCGGCATACCGCGTCGC
AGCGACAGCCTTGGCCGGAGTCTCAGTGGCAGTTTCGTTGCACCCACCCC
AACTGAAGACGACGAAGAAGTCAACGGACACGGCACCGGTAAAGGGCGCC
TGCGCTCTGCCAGTGGTGTGAGCTCGATTGTGGAGGAAGACGACGATGAT
CGCCTTGACGCTCGTAACGCGGCTAGTCGCCTGGCCACGAGCACTTTCTA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042147retrograde transport, endosome to Golgi
GO:0015031protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0030904retromer complex
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005247ATCC10864_005247Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005247-T1.exon1ATCC10864_005247-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005247-T1.exon2ATCC10864_005247-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005247-T1.exon3ATCC10864_005247-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005247-T1.cdsATCC10864_005247-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005247-T1ATCC10864_005247-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR014461
InterProIPR037907
InterProIPR027267
PFAMPF09325
InterProIPR001683
PFAMPF00787
InterProIPR015404
InterProIPR036871
Properties
Property NameValue
NoteBUSCO:EOG09261IEH
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:497387..499263 +
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