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ATCC10864_005341-T1, ATCC10864_005341-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005341-T1
Unique NameATCC10864_005341-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:54726..56143+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005341-T1 ID=ATCC10864_005341-T1|Name=ATCC10864_005341-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1418bp|location=Sequence derived from alignment at MCQH01000142:54726..56143+ (Aspergillus niger ATCC 10864)
ATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAA
ATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAAT
TCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAG
GAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGA
CAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGG
AGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGG
CCTTTCTACGGTAAGGATATGAATGCACAACTGGGATTTTCATGACAGCG
GCTAACAGTGAGTCAATAGCGGTCAAGTGCAACCCCGACCCGGAGATCCT
TCGCCTCATGGCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCG
AGATCGATATGGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTAC
GCGCAGCCCTGCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGG
CGTCAAGCAGATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGG
CCAACTACCCGGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCG
AACAGCTTGTGCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGC
TCGCCAGCTCCTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCG
TGAGTTTTCACGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAA
GCCGTGCAGGACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCA
CGAACTGCACACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTG
AGAAATTCGCCGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCC
AACATCCGGGTCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTT
CACTCTGGCGGCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGG
ACCCGGCCAACGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGA
AACTTCTCCAACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCT
GACCTGTGCGTCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTG
TCACGTACTCCATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCC
AAGCGCATTGCGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTT
CGAGGAGATGGGAGCCTACACCAAGTGTAGCGCGACCCGCTTTAACGGCT
TTTCGGACAACCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCT
GCGCTCCTCGAGTACTAG
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Coding sequence (CDS) from alignment at MCQH01000142:54726..56143+

>ATCC10864_005341-T1 ID=ATCC10864_005341-T1|Name=ATCC10864_005341-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2718bp|location=Sequence derived from alignment at MCQH01000142:54726..56143+ (Aspergillus niger ATCC 10864)
ATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAA
ATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAAT
TCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAG
GAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGA
CAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGG
AGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGG
CCTTTCTACGCGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCAT
GGCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATA
TGGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCC
TGCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCA
GATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACC
CGGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTG
TGCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCT
CCTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTC
ACGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAG
GACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCA
CACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCG
CCGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGG
GTCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGC
GGCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCA
ACGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCC
AACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGC
GTCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACT
CCATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATT
GCGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGAT
GGGAGCCTACACCAAGTGTAGCGCGACCCGCTTTAACGGCTTTTCGGACA
ACCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTC
GAGTACTAGATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATG
CACTCCTAAATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATC
ATGGTCAATTCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTG
GCTGCCAAGGAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGT
CAATGTGGACAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAG
ATATGGGGGAGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGC
CGTGTTCGGCCTTTCTACGCGGTCAAGTGCAACCCCGACCCGGAGATCCT
TCGCCTCATGGCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCG
AGATCGATATGGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTAC
GCGCAGCCCTGCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGG
CGTCAAGCAGATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGG
CCAACTACCCGGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCG
AACAGCTTGTGCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGC
TCGCCAGCTCCTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCG
TGAGTTTTCACGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAA
GCCGTGCAGGACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCA
CGAACTGCACACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTG
AGAAATTCGCCGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCC
AACATCCGGGTCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTT
CACTCTGGCGGCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGG
ACCCGGCCAACGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGA
AACTTCTCCAACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCT
GACCTGTGCGTCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTG
TCACGTACTCCATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCC
AAGCGCATTGCGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTT
CGAGGAGATGGGAGCCTACACCAAGTGTAGCGCGACCCGCTTTAACGGCT
TTTCGGACAACCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCT
GCGCTCCTCGAGTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006596polyamine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPE1ATCC10864_005341Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005341-T1.exon1ATCC10864_005341-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005341-T1.exon2ATCC10864_005341-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005341-T1.cdsATCC10864_005341-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005341-T1ATCC10864_005341-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR022657
InterProIPR000183
PFAMPF02784
InterProIPR029066
InterProIPR022653
InterProIPR009006
InterProIPR002433
InterProIPR022643
PFAMPF00278
InterProIPR022644
Properties
Property NameValue
NoteBUSCO:EOG09261V03
ProductOrnithine decarboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:54726..56143 +
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