You are here

Home

ATCC10864_005363-T1, ATCC10864_005363-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005363-T1
Unique NameATCC10864_005363-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:97644..99263-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005363-T1 ID=ATCC10864_005363-T1|Name=ATCC10864_005363-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1620bp|location=Sequence derived from alignment at MCQH01000142:97644..99263- (Aspergillus niger ATCC 10864)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000142:97644..99263-

>ATCC10864_005363-T1 ID=ATCC10864_005363-T1|Name=ATCC10864_005363-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1620bp|location=Sequence derived from alignment at MCQH01000142:97644..99263- (Aspergillus niger ATCC 10864)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004496mevalonate kinase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005363ATCC10864_005363Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005363-T1.cdsATCC10864_005363-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005363-T1.exon1ATCC10864_005363-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005363-T1ATCC10864_005363-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00288
InterProIPR036554
InterProIPR014721
InterProIPR020568
InterProIPR013750
InterProIPR006205
InterProIPR006204
PFAMPF08544
InterProIPR006203
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:97644..99263 -
Powered by Drupal