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ATCC10864_005393-T1, ATCC10864_005393-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005393-T1
Unique NameATCC10864_005393-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:187896..188644-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005393-T1 ID=ATCC10864_005393-T1|Name=ATCC10864_005393-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=749bp|location=Sequence derived from alignment at MCQH01000142:187896..188644- (Aspergillus niger ATCC 10864)
ATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCT
GAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGGTT
CGTTGCAGCTTCCCCAGTGATCGGAGACGCGGAACCGCCATAAACTAGAT
AGCTAACCCGGAGCTCAATTAGTACAATTCGCGGAGTACATCCAAGCCAA
CATCCAACTATACACGATGCGGAACGATACGGAGCTGGGTCCGAGTGCGG
TTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAAT
CCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAA
GCCTCATCTATACTGGATTGATTATCTGGCATCATTGGCTCCCGTACCAT
ATGCTGCTCACGGCTATGCGCAGTAAGTGTGGGCGCTGAGTAACAGCGGT
CTCAAGCTGTTGGGATTCATGCTAAGGTGCTCTAGATACTACTGCCTGTC
CACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGA
AGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGAT
TACAAGGGGGTATGTTACCAGAGTCATAGGCCCCGCAGTGCGAGCGAGTA
TGGGTAGCTGACAGCTTCTAGGTTCTGGTGAAGATCGTGACAAAGGACGG
CGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAA
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Coding sequence (CDS) from alignment at MCQH01000142:187896..188644-

>ATCC10864_005393-T1 ID=ATCC10864_005393-T1|Name=ATCC10864_005393-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2196bp|location=Sequence derived from alignment at MCQH01000142:187896..188644- (Aspergillus niger ATCC 10864)
GTTCTGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTACCATTCGA
TAATGACAGGATTGTCAAGAGTGCCTAAATACTACTGCCTGTCCACTCTC
GATAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAAGCTCTT
GGAAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGATTACAAGG
GGTACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGC
GGAACGATACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGA
GAAATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCT
GCTGGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTG
ATTATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCG
CAATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAG
CTGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGG
TTCTGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTACCATTCGAT
AATGACAGGATTGTCAAGAGTGCCTAAATACTACTGCCTGTCCACTCTCG
ATAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAAGCTCTTG
GAAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGATTACAAGGG
GTACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCG
GAACGATACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAG
AAATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTG
CTGGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGA
TTATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGC
AATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGC
TGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGGT
TCTGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTACCATTCGATA
ATGACAGGATTGTCAAGAGTGCCTAAATACTACTGCCTGTCCACTCTCGA
TAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAAGCTCTTGG
AAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGATTACAAGGGG
TACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGG
AACGATACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGA
AATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGC
TGGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGAT
TATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCA
ATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCT
GAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGGTT
CTGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTACCATTCGATAA
TGACAGGATTGTCAAGAGTGCCTAAATACTACTGCCTGTCCACTCTCGAT
AAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAAGCTCTTGGA
AATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGATTACAAGGGGT
ACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGA
ACGATACGGAGCTGGGTCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAA
ATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCT
GGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATT
ATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAA
TGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTG
AATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCB4ATCC10864_005393Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005393-T1ATCC10864_005393-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005393-T1.cdsATCC10864_005393-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005393-T1.exon4ATCC10864_005393-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005393-T1.exon3ATCC10864_005393-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005393-T1.exon2ATCC10864_005393-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005393-T1.exon1ATCC10864_005393-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001353
InterProIPR023333
InterProIPR035206
PFAMPF00227
InterProIPR029055
Properties
Property NameValue
NoteMEROPS:MER0002676
ProductProbable proteasome subunit beta type-4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:187896..188644 -
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