You are here

Home

ATCC10864_005401-T1, ATCC10864_005401-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005401-T1
Unique NameATCC10864_005401-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:209440..211023-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005401-T1 ID=ATCC10864_005401-T1|Name=ATCC10864_005401-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1584bp|location=Sequence derived from alignment at MCQH01000142:209440..211023- (Aspergillus niger ATCC 10864)
ATGAGCTCTCATGTCGTGGTTCTTGATGCAACAGCCCGACGAGCTACTAT
CAAGACGACACCTGGGAAACATCTAACTGATGTTTTACACGAAGCGTGTA
CAAAGCTAGGTGTGGATGCCAGCCAATATGGACTAAAGTAAGGTTCGACT
ATGCCCATCCTACGAAGTTCACAAGACTGACGGCTTTTGTCAAGATACAA
AGGTAAAGAGCTCGATCTTTCACTGGTATTTCGCCTCTCTGGGCTCACCT
CCGGCGCAAAGCTGGAGTTGGTTCAGCTCTCCCGTTCGCCCTCCGTCGTC
ACCGTCGCTCTACAACTGCCCGAATCTGAAGCACGAGGGGGGCCCCCAAA
CAGACGACTTTTGGATAAATTCCCCAGCACGACAACGATATGGCTAGTAT
TGCGCAAATTCGAGGCTGGAGTTGCTGGAGGTGCTCCGACCCGGAATATA
ACTGGAAGGGGTGTCCCTAGTGGCAATGAAGGCGCAGGGAGACTGTACTA
CGAAACTCCGGTCGTCCAGATTATGGAACGGGAACTCTCCTCGTTCACTG
ATCTGCAGAAATCTTTGGCACAGCTGGGATTCAACAACGGAAATGTGCTG
CTGAGGCTGAGCTTTCGTCGTACAGAGGAACCTTTGGAGGAGGCTATGGT
CAAGATTCAGGAGTACTTCAAACCGTTCGACGACGCGACCCCCAAGGCCG
AAGAACCGCCTGCACCTACAGAGCAACCACCACAGGCCGATGCATCCAAC
AAACAAGAGGGGGCACAGCAACAGCCCGCATCTACTTCCGAGGCACCTTC
TACCGCGGAACAAACCCCGCCAACTGCTCCTACATCCAATGCGCCTGCTG
CAGAGCCCACCGAAGTACCAGCTGGGTTCTCTCGACCCATAACCGTATTC
TCTCCCCCTTCCAACACTACACCACAGTCCGCACAAACGAACTACAACGA
GACCGACTACATCCCATCCATCGAACACGCACAAGCACATCAGCGACGAC
TTAATGCAACCTCCCGACCCCAACGCCTTCCCACGGACGCCGAAATCGCC
GCCAAAGCAGCCGCAGAAGAGGAACGGCTCGCCGCAGTCACTCAAGTAGA
CGTCAAGGTGCGTCTACCAGACCAAAGCCAAGTCGTGGCCAAGTTCGGAC
AAGAAGACACGGCCAAATCACTCTACGACTTTGTCCGAAACTGTCTTGCC
GCGCCATTCGCCAGCGAGAAATTTATCATCACGTCCTCCCTCCCCAAGAC
ATCTAGCGGAGGACAACCGGGGAGACATATCCAAAACGTCGTTCCCGACT
CAGACCAACAGCTGCTGATCAAGGATCTAGCCATGATCGGTCGTGTGCTA
GTCAACTTCACTTGGGATGCGAACGCATCCCCTGCCGCCCGGCAAAGCCG
GGAACTCTTGAAACCCGAACTACGGACACGCGCGCAGGAACTCAAGGTTG
AACAGCCCAAGGACGTAACAGATAACTCGGAAGTGAGCAGGCCGAAGCCG
ACAAGCACCGGGGATGAAACTCGCGGCGAGAAGCGGAAGCCAGGCGGCAT
GCCCAAATGGTTGAAACTACCAGGCAAGAAATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000142:209440..211023-

>ATCC10864_005401-T1 ID=ATCC10864_005401-T1|Name=ATCC10864_005401-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3054bp|location=Sequence derived from alignment at MCQH01000142:209440..211023- (Aspergillus niger ATCC 10864)
ATACAAAGGTAAAGAGCTCGATCTTTCACTGGTATTTCGCCTCTCTGGGC
TCACCTCCGGCGCAAAGCTGGAGTTGGTTCAGCTCTCCCGTTCGCCCTCC
GTCGTCACCGTCGCTCTACAACTGCCCGAATCTGAAGCACGAGGGGGGCC
CCCAAACAGACGACTTTTGGATAAATTCCCCAGCACGACAACGATATGGC
TAGTATTGCGCAAATTCGAGGCTGGAGTTGCTGGAGGTGCTCCGACCCGG
AATATAACTGGAAGGGGTGTCCCTAGTGGCAATGAAGGCGCAGGGAGACT
GTACTACGAAACTCCGGTCGTCCAGATTATGGAACGGGAACTCTCCTCGT
TCACTGATCTGCAGAAATCTTTGGCACAGCTGGGATTCAACAACGGAAAT
GTGCTGCTGAGGCTGAGCTTTCGTCGTACAGAGGAACCTTTGGAGGAGGC
TATGGTCAAGATTCAGGAGTACTTCAAACCGTTCGACGACGCGACCCCCA
AGGCCGAAGAACCGCCTGCACCTACAGAGCAACCACCACAGGCCGATGCA
TCCAACAAACAAGAGGGGGCACAGCAACAGCCCGCATCTACTTCCGAGGC
ACCTTCTACCGCGGAACAAACCCCGCCAACTGCTCCTACATCCAATGCGC
CTGCTGCAGAGCCCACCGAAGTACCAGCTGGGTTCTCTCGACCCATAACC
GTATTCTCTCCCCCTTCCAACACTACACCACAGTCCGCACAAACGAACTA
CAACGAGACCGACTACATCCCATCCATCGAACACGCACAAGCACATCAGC
GACGACTTAATGCAACCTCCCGACCCCAACGCCTTCCCACGGACGCCGAA
ATCGCCGCCAAAGCAGCCGCAGAAGAGGAACGGCTCGCCGCAGTCACTCA
AGTAGACGTCAAGGTGCGTCTACCAGACCAAAGCCAAGTCGTGGCCAAGT
TCGGACAAGAAGACACGGCCAAATCACTCTACGACTTTGTCCGAAACTGT
CTTGCCGCGCCATTCGCCAGCGAGAAATTTATCATCACGTCCTCCCTCCC
CAAGACATCTAGCGGAGGACAACCGGGGAGACATATCCAAAACGTCGTTC
CCGACTCAGACCAACAGCTGCTGATCAAGGATCTAGCCATGATCGGTCGT
GTGCTAGTCAACTTCACTTGGGATGCGAACGCATCCCCTGCCGCCCGGCA
AAGCCGGGAACTCTTGAAACCCGAACTACGGACACGCGCGCAGGAACTCA
AGGTTGAACAGCCCAAGGACGTAACAGATAACTCGGAAGTGAGCAGGCCG
AAGCCGACAAGCACCGGGGATGAAACTCGCGGCGAGAAGCGGAAGCCAGG
CGGCATGCCCAAATGGTTGAAACTACCAGGCAAGAAATGAATGAGCTCTC
ATGTCGTGGTTCTTGATGCAACAGCCCGACGAGCTACTATCAAGACGACA
CCTGGGAAACATCTAACTGATGTTTTACACGAAGCGTGTACAAAGCTAGG
TGTGGATGCCAGCCAATATGGACTAAAATACAAAGGTAAAGAGCTCGATC
TTTCACTGGTATTTCGCCTCTCTGGGCTCACCTCCGGCGCAAAGCTGGAG
TTGGTTCAGCTCTCCCGTTCGCCCTCCGTCGTCACCGTCGCTCTACAACT
GCCCGAATCTGAAGCACGAGGGGGGCCCCCAAACAGACGACTTTTGGATA
AATTCCCCAGCACGACAACGATATGGCTAGTATTGCGCAAATTCGAGGCT
GGAGTTGCTGGAGGTGCTCCGACCCGGAATATAACTGGAAGGGGTGTCCC
TAGTGGCAATGAAGGCGCAGGGAGACTGTACTACGAAACTCCGGTCGTCC
AGATTATGGAACGGGAACTCTCCTCGTTCACTGATCTGCAGAAATCTTTG
GCACAGCTGGGATTCAACAACGGAAATGTGCTGCTGAGGCTGAGCTTTCG
TCGTACAGAGGAACCTTTGGAGGAGGCTATGGTCAAGATTCAGGAGTACT
TCAAACCGTTCGACGACGCGACCCCCAAGGCCGAAGAACCGCCTGCACCT
ACAGAGCAACCACCACAGGCCGATGCATCCAACAAACAAGAGGGGGCACA
GCAACAGCCCGCATCTACTTCCGAGGCACCTTCTACCGCGGAACAAACCC
CGCCAACTGCTCCTACATCCAATGCGCCTGCTGCAGAGCCCACCGAAGTA
CCAGCTGGGTTCTCTCGACCCATAACCGTATTCTCTCCCCCTTCCAACAC
TACACCACAGTCCGCACAAACGAACTACAACGAGACCGACTACATCCCAT
CCATCGAACACGCACAAGCACATCAGCGACGACTTAATGCAACCTCCCGA
CCCCAACGCCTTCCCACGGACGCCGAAATCGCCGCCAAAGCAGCCGCAGA
AGAGGAACGGCTCGCCGCAGTCACTCAAGTAGACGTCAAGGTGCGTCTAC
CAGACCAAAGCCAAGTCGTGGCCAAGTTCGGACAAGAAGACACGGCCAAA
TCACTCTACGACTTTGTCCGAAACTGTCTTGCCGCGCCATTCGCCAGCGA
GAAATTTATCATCACGTCCTCCCTCCCCAAGACATCTAGCGGAGGACAAC
CGGGGAGACATATCCAAAACGTCGTTCCCGACTCAGACCAACAGCTGCTG
ATCAAGGATCTAGCCATGATCGGTCGTGTGCTAGTCAACTTCACTTGGGA
TGCGAACGCATCCCCTGCCGCCCGGCAAAGCCGGGAACTCTTGAAACCCG
AACTACGGACACGCGCGCAGGAACTCAAGGTTGAACAGCCCAAGGACGTA
ACAGATAACTCGGAAGTGAGCAGGCCGAAGCCGACAAGCACCGGGGATGA
AACTCGCGGCGAGAAGCGGAAGCCAGGCGGCATGCCCAAATGGTTGAAAC
TACCAGGCAAGAAATGAATGAGCTCTCATGTCGTGGTTCTTGATGCAACA
GCCCGACGAGCTACTATCAAGACGACACCTGGGAAACATCTAACTGATGT
TTTACACGAAGCGTGTACAAAGCTAGGTGTGGATGCCAGCCAATATGGAC
TAAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005401ATCC10864_005401Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005401-T1ATCC10864_005401-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005401-T1.cdsATCC10864_005401-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005401-T1.exon2ATCC10864_005401-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005401-T1.exon1ATCC10864_005401-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029071
PFAMPF11470
InterProIPR001012
PFAMPF00789
InterProIPR021569
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:209440..211023 -
Powered by Drupal