You are here

Home

ATCC10864_005429-T1, ATCC10864_005429-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005429-T1
Unique NameATCC10864_005429-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:291401..292681-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005429-T1 ID=ATCC10864_005429-T1|Name=ATCC10864_005429-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1281bp|location=Sequence derived from alignment at MCQH01000142:291401..292681- (Aspergillus niger ATCC 10864)
ATGGCTGCCTCCGCTGACAGTCAGGTCTTCCGGGCCACCACCACCGCCCC
CGTCAACATCGCCGTCATCAAGTATGTTCCCCCTCCACACTCACCGATAG
TACGTACGCTTGGTGGATTCTAATCGTTACTGAAAAGGTACTGGGGCAAG
CGCGATGCTGTTCTCAACCTTCCTACCAACTCCTCTCTCTCCGTCACCCT
TTCGCAGCGTTCCCTCCGCACGCTCACCACCGCTTCCTGCGCTCCTTTCT
ACCCCGCCAAGGACGAGCTCACCCTGAACGGCAAGCCCCAAGACATCCAA
TCCTCTAAGCGTACACTTGCTTGTCTGGCCAGCCTGCGCGCCCACCGTCG
CGAGCTCGAGGATGCAAACCCCTCGTTGCCCAAGCTGTCCAGCTTCCCTC
TTCGCATTGTTTCCGAGAACAACTTCCCCACCGCCGCCGGTCTCGCCAGT
TCGGCTGCCGGGTTTGCGGCCCTCGTTCGTGCCGTGGCAGACCTTTACCA
GCTGCCCCAGTCGCCCCGTGATCTGAGCCGCATCGCTCGTCAGGGCTCTG
GTTCCGCCTGCCGTTCTCTGATGGGTGGTTATGTCGCCTGGCGCGCTGGA
TCCTTGGAGGATGGAAGCGACAGTTTGGCAGAGGAGGTTGCGCCGCAGTC
TCACTGGCCTGAAATGCGTGCCCTCATCCTGGTTGTCAGTGCCGCAAAGA
AGGATGTCCCCAGCACTGAGGGTATGCAGACGACCGTCGCTACCTCGAAC
CTTTTTGCTACCCGCGCGAGCACTGTTGTTCCGGAGCGGATGGCTGCCAT
CGAGACCGCCATCCAGAACCGCGATTTCCCCGCCTTCGCAGAGATCACGA
TGCGCGACTCCAACAGCTTCCACGCCACTTGCTTGGACTCCTGGCCTCCG
ATCTTCTACATGAACGACGTCTCTCGCGCTGCCGTCAGACTCGTCCATGA
TATTAACCGCGCAATCGGCCGGACCGTCTGCGCGTACACCTACGATGCGG
GCCCGAACGCTGTCATCTACTACCTTGAGAAGGATACCGAGCTTGTTGCC
GGTACCGTCAAGGCTATCCTTGGTGAGAAGACGGAGGGCTGGGAAGGTCC
CTTCTACACGCCTCTGAAGGACGTTACCACCCCCGGCGTGTCCCTGGATG
AGATCGACCCCCGCACCGTGGAGTCGCTCAAGGATGGCGTGAGCCGTGTG
ATCTTGACCGGTGTTGGCGAGGGCCCCATCTCAGTGGACCAGCATCTTGT
CAGTGAGAAGGGCGATATTCTTTCTGCCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000142:291401..292681-

>ATCC10864_005429-T1 ID=ATCC10864_005429-T1|Name=ATCC10864_005429-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2430bp|location=Sequence derived from alignment at MCQH01000142:291401..292681- (Aspergillus niger ATCC 10864)
GTACTGGGGCAAGCGCGATGCTGTTCTCAACCTTCCTACCAACTCCTCTC
TCTCCGTCACCCTTTCGCAGCGTTCCCTCCGCACGCTCACCACCGCTTCC
TGCGCTCCTTTCTACCCCGCCAAGGACGAGCTCACCCTGAACGGCAAGCC
CCAAGACATCCAATCCTCTAAGCGTACACTTGCTTGTCTGGCCAGCCTGC
GCGCCCACCGTCGCGAGCTCGAGGATGCAAACCCCTCGTTGCCCAAGCTG
TCCAGCTTCCCTCTTCGCATTGTTTCCGAGAACAACTTCCCCACCGCCGC
CGGTCTCGCCAGTTCGGCTGCCGGGTTTGCGGCCCTCGTTCGTGCCGTGG
CAGACCTTTACCAGCTGCCCCAGTCGCCCCGTGATCTGAGCCGCATCGCT
CGTCAGGGCTCTGGTTCCGCCTGCCGTTCTCTGATGGGTGGTTATGTCGC
CTGGCGCGCTGGATCCTTGGAGGATGGAAGCGACAGTTTGGCAGAGGAGG
TTGCGCCGCAGTCTCACTGGCCTGAAATGCGTGCCCTCATCCTGGTTGTC
AGTGCCGCAAAGAAGGATGTCCCCAGCACTGAGGGTATGCAGACGACCGT
CGCTACCTCGAACCTTTTTGCTACCCGCGCGAGCACTGTTGTTCCGGAGC
GGATGGCTGCCATCGAGACCGCCATCCAGAACCGCGATTTCCCCGCCTTC
GCAGAGATCACGATGCGCGACTCCAACAGCTTCCACGCCACTTGCTTGGA
CTCCTGGCCTCCGATCTTCTACATGAACGACGTCTCTCGCGCTGCCGTCA
GACTCGTCCATGATATTAACCGCGCAATCGGCCGGACCGTCTGCGCGTAC
ACCTACGATGCGGGCCCGAACGCTGTCATCTACTACCTTGAGAAGGATAC
CGAGCTTGTTGCCGGTACCGTCAAGGCTATCCTTGGTGAGAAGACGGAGG
GCTGGGAAGGTCCCTTCTACACGCCTCTGAAGGACGTTACCACCCCCGGC
GTGTCCCTGGATGAGATCGACCCCCGCACCGTGGAGTCGCTCAAGGATGG
CGTGAGCCGTGTGATCTTGACCGGTGTTGGCGAGGGCCCCATCTCAGTGG
ACCAGCATCTTGTCAGTGAGAAGGGCGATATTCTTTCTGCCTAGATGGCT
GCCTCCGCTGACAGTCAGGTCTTCCGGGCCACCACCACCGCCCCCGTCAA
CATCGCCGTCATCAAGTACTGGGGCAAGCGCGATGCTGTTCTCAACCTTC
CTACCAACTCCTCTCTCTCCGTCACCCTTTCGCAGCGTTCCCTCCGCACG
CTCACCACCGCTTCCTGCGCTCCTTTCTACCCCGCCAAGGACGAGCTCAC
CCTGAACGGCAAGCCCCAAGACATCCAATCCTCTAAGCGTACACTTGCTT
GTCTGGCCAGCCTGCGCGCCCACCGTCGCGAGCTCGAGGATGCAAACCCC
TCGTTGCCCAAGCTGTCCAGCTTCCCTCTTCGCATTGTTTCCGAGAACAA
CTTCCCCACCGCCGCCGGTCTCGCCAGTTCGGCTGCCGGGTTTGCGGCCC
TCGTTCGTGCCGTGGCAGACCTTTACCAGCTGCCCCAGTCGCCCCGTGAT
CTGAGCCGCATCGCTCGTCAGGGCTCTGGTTCCGCCTGCCGTTCTCTGAT
GGGTGGTTATGTCGCCTGGCGCGCTGGATCCTTGGAGGATGGAAGCGACA
GTTTGGCAGAGGAGGTTGCGCCGCAGTCTCACTGGCCTGAAATGCGTGCC
CTCATCCTGGTTGTCAGTGCCGCAAAGAAGGATGTCCCCAGCACTGAGGG
TATGCAGACGACCGTCGCTACCTCGAACCTTTTTGCTACCCGCGCGAGCA
CTGTTGTTCCGGAGCGGATGGCTGCCATCGAGACCGCCATCCAGAACCGC
GATTTCCCCGCCTTCGCAGAGATCACGATGCGCGACTCCAACAGCTTCCA
CGCCACTTGCTTGGACTCCTGGCCTCCGATCTTCTACATGAACGACGTCT
CTCGCGCTGCCGTCAGACTCGTCCATGATATTAACCGCGCAATCGGCCGG
ACCGTCTGCGCGTACACCTACGATGCGGGCCCGAACGCTGTCATCTACTA
CCTTGAGAAGGATACCGAGCTTGTTGCCGGTACCGTCAAGGCTATCCTTG
GTGAGAAGACGGAGGGCTGGGAAGGTCCCTTCTACACGCCTCTGAAGGAC
GTTACCACCCCCGGCGTGTCCCTGGATGAGATCGACCCCCGCACCGTGGA
GTCGCTCAAGGATGGCGTGAGCCGTGTGATCTTGACCGGTGTTGGCGAGG
GCCCCATCTCAGTGGACCAGCATCTTGTCAGTGAGAAGGGCGATATTCTT
TCTGCCTAGATGGCTGCCTCCGCTGACAGTCAGGTCTTCCGGGCCACCAC
CACCGCCCCCGTCAACATCGCCGTCATCAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO:0019287isopentenyl diphosphate biosynthetic process, mevalonate pathway
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016831carboxy-lyase activity
GO:0004163diphosphomevalonate decarboxylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005429ATCC10864_005429Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005429-T1ATCC10864_005429-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005429-T1.cdsATCC10864_005429-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005429-T1.exon2ATCC10864_005429-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005429-T1.exon1ATCC10864_005429-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00288
InterProIPR036554
InterProIPR005935
InterProIPR014721
InterProIPR020568
PFAMPF18376
InterProIPR006204
InterProIPR029765
InterProIPR041431
Properties
Property NameValue
NoteBUSCO:EOG09263BG5
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:291401..292681 -
Powered by Drupal