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ATCC10864_005431-T1, ATCC10864_005431-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005431-T1
Unique NameATCC10864_005431-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:294224..295124-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005431-T1 ID=ATCC10864_005431-T1|Name=ATCC10864_005431-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=901bp|location=Sequence derived from alignment at MCQH01000142:294224..295124- (Aspergillus niger ATCC 10864)
ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCG
TCGCTCCGACGATCCCCAGTATCGCGATGACCCCGAATTCCATCGTTTGA
CCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG
TTGTCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGT
GCGCGAGAGAGTCCACAAGCTCCTGGAGGATACTCGGGGGGGTTTCAGGG
ATGTCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGTGTA
TGTTACGCCCATATATAACCCCCCACCCCCAACTGCGCTGCGACCGAACA
AGCAATACTAATGTATTTCTCACTAGCCTTCCCAAAAATGGACTCAGCAG
AAGCTCTCGTCCGAATTCAAATCTACCCTAGAAGAGTTCCAGACTGTTCA
GCGTCGTGCCTTGGAGAAGCAACGGGCATCCGCAGCAGCCGCTCGGACTG
CCGTAGACGAAGCGGAGCCTGGTTCCGGAGGTGACCATCAGCCGCAGCAA
CAGCAAGACCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGA
AGTGGACTTCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCA
ACATTGAGCAGAGCGTTGGCGAACTCAATGAACTGTTCCGGGACGTGGCT
CACATTGTCCATGAGCAAGGTGGACAGCTTGACATTATCAGCGAGAATGT
TGAACGAGTTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCG
CCAGCCGGTACCAGAAGAATGCGCGCAACAAGGCTTGCTGTCTGCTTGTC
ATTCTTGCTGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATA
G
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Coding sequence (CDS) from alignment at MCQH01000142:294224..295124-

>ATCC10864_005431-T1 ID=ATCC10864_005431-T1|Name=ATCC10864_005431-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1644bp|location=Sequence derived from alignment at MCQH01000142:294224..295124- (Aspergillus niger ATCC 10864)
CCTTCCCAAAAATGGACTCAGCAGAAGCTCTCGTCCGAATTCAAATCTAC
CCTAGAAGAGTTCCAGACTGTTCAGCGTCGTGCCTTGGAGAAGCAACGGG
CATCCGCAGCAGCCGCTCGGACTGCCGTAGACGAAGCGGAGCCTGGTTCC
GGAGGTGACCATCAGCCGCAGCAACAGCAAGACCAATTGTTGGAGGAACA
GCCCCGCCTTGCGAATCAGGACGAAGTGGACTTCCAGGAGGCCCTCATTA
TCGAGCGCGAGGCTGAGATCCGCAACATTGAGCAGAGCGTTGGCGAACTC
AATGAACTGTTCCGGGACGTGGCTCACATTGTCCATGAGCAAGGTGGACA
GCTTGACATTATCAGCGAGAATGTTGAACGAGTTGGCGATGACACTCGTG
GAGCAAACGTCGAGCTCCGTAGCGCCAGCCGGTACCAGAAGAATGCGCGC
AACAAGGCTTGCTGTCTGCTTGTCATTCTTGCTGTTATCCTTACCATCAT
CGTCCTGGCGGCAACCCTGGGATAGATGTCGTTTGATCGCTTGAACTCGC
TAGAGGCACAGCCTACAACTTTCCGTCGCTCCGACGATCCCCAGTATCGC
GATGACCCCGAATTCCATCGTTTGACCGAGGGTCTCTCCAACCAACTGTT
TACCCTGACCTCCAACATCACTCGGTTGTCCGATCAGATTGCCCTTCTGG
GAACGAGGCGAGACACTGAGCGTGTGCGCGAGAGAGTCCACAAGCTCCTG
GAGGATACTCGGGGGGGTTTCAGGGATGTCGCAGAAGGGATTAAGAAGGT
CCAGACATGGGAGGATGTCAGTCCTTCCCAAAAATGGACTCAGCAGAAGC
TCTCGTCCGAATTCAAATCTACCCTAGAAGAGTTCCAGACTGTTCAGCGT
CGTGCCTTGGAGAAGCAACGGGCATCCGCAGCAGCCGCTCGGACTGCCGT
AGACGAAGCGGAGCCTGGTTCCGGAGGTGACCATCAGCCGCAGCAACAGC
AAGACCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGAAGTG
GACTTCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCAACAT
TGAGCAGAGCGTTGGCGAACTCAATGAACTGTTCCGGGACGTGGCTCACA
TTGTCCATGAGCAAGGTGGACAGCTTGACATTATCAGCGAGAATGTTGAA
CGAGTTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAG
CCGGTACCAGAAGAATGCGCGCAACAAGGCTTGCTGTCTGCTTGTCATTC
TTGCTGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATAGATG
TCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCGTCG
CTCCGACGATCCCCAGTATCGCGATGACCCCGAATTCCATCGTTTGACCG
AGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGGTTG
TCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGTGCG
CGAGAGAGTCCACAAGCTCCTGGAGGATACTCGGGGGGGTTTCAGGGATG
TCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005431ATCC10864_005431Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005431-T1ATCC10864_005431-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005431-T1.cdsATCC10864_005431-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005431-T1.exon2ATCC10864_005431-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005431-T1.exon1ATCC10864_005431-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR010989
PFAMPF14523
InterProIPR006011
InterProIPR000727
PFAMPF05739
InterProIPR006012
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:294224..295124 -
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