You are here

Home

ATCC10864_005439-T1, ATCC10864_005439-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005439-T1
Unique NameATCC10864_005439-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:322870..323775-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005439-T1 ID=ATCC10864_005439-T1|Name=ATCC10864_005439-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=906bp|location=Sequence derived from alignment at MCQH01000142:322870..323775- (Aspergillus niger ATCC 10864)
ATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCTCTCCCA
GCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGCACATCACCGGCG
CCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCTTCTCTGTATGCC
AGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAAGCGGTCCTTGAG
ATCTAGTGGCTCCCAGTCCGAGGTATGCTATCTATGACATCTACACTCCT
AGTCAAACCACCTGTATGGCTAATCATTATTTTGTGTCGCTTAGCTTGTC
GAACGCCTTTCCAATCATGACTTCCTTCAGTCCCGTGCCTTCAGCATCGC
TATGAAGAGGATCAACGGCAGCTCTAGCGCTGAGTATGTAGATCTGATCA
TCATGACAGCCCGTTACCTCGGGTAAAGCCAGTTCGGAACTAACATTCTT
GCTCAACACAGGAAGAATCATGGCCGCCAATTCAACACTTCCCGTTCTAG
CAAGGCCGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGCCATCTA
TGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATCCCGATC
CTTTCCGACATCTATACCCACTATGACCCGACCCAGTCGCAAGAGGCCCC
CATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACATCTCCG
CAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATCGATCCC
TTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGAGCTGAA
GAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAACTTTGGA
GTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCTCAGAAA
CACTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000142:322870..323775-

>ATCC10864_005439-T1 ID=ATCC10864_005439-T1|Name=ATCC10864_005439-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2268bp|location=Sequence derived from alignment at MCQH01000142:322870..323775- (Aspergillus niger ATCC 10864)
GAAGAATCATGGCCGCCAATTCAACACTTCCCGTTCTAGCAAGGCCGTCG
GTGACTCATCCACCGTTGACTTCGCTTACATGCCATCTATGGCAGAGATC
GATGCACCTGCTGCTCGTGCCGATCCGCAAATCCCGATCCTTTCCGACAT
CTATACCCACTATGACCCGACCCAGTCGCAAGAGGCCCCCATGAGGCCCC
AGGTTTATACCGTGTCCGGGGGTGCTGGTGACATCTCCGCAAGTCCCATG
ACCGAGGTTGTTGACAATCACTCCGTGGACATCGATCCCTTCTCCCTAAC
CGAGACGGTTGGGAAGTCCAGATTCGGCGAGGAGCTGAAGAGGCAACAGA
ACGGTACCTCCGAACCAGGAGTCGTCCGGGAACTTTGGAGTGGTTTCTTG
GAAGATCTTTTAGGTTCCAAACAGCAGCAAGCTCAGAAACACTAACTTGT
CGAACGCCTTTCCAATCATGACTTCCTTCAGTCCCGTGCCTTCAGCATCG
CTATGAAGAGGATCAACGGCAGCTCTAGCGCTGAATGGCAGCTCCTCGTT
CCAGTTCGTTGCGCGCTCTCCGCGTGCTCTCCCAGCAGCACTCTACCACC
CCATCCATCCGTCGGGGCTTGCACATCACCGGCGCCCAGTCTGCACAACC
CGCCAATGTCTCGGACAGGGCTTCTCTGTATGCCAGCCGCACTCTGGCGG
ATCTGAAGAATGAATGTGTGAAGCGGTCCTTGAGATCTAGTGGCTCCCAG
TCCGAGGAAGAATCATGGCCGCCAATTCAACACTTCCCGTTCTAGCAAGG
CCGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGCCATCTATGGCA
GAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATCCCGATCCTTTC
CGACATCTATACCCACTATGACCCGACCCAGTCGCAAGAGGCCCCCATGA
GGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACATCTCCGCAAGT
CCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATCGATCCCTTCTC
CCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGAGCTGAAGAGGC
AACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAACTTTGGAGTGGT
TTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCTCAGAAACACTA
ACTTGTCGAACGCCTTTCCAATCATGACTTCCTTCAGTCCCGTGCCTTCA
GCATCGCTATGAAGAGGATCAACGGCAGCTCTAGCGCTGAATGGCAGCTC
CTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCTCTCCCAGCAGCACTCT
ACCACCCCATCCATCCGTCGGGGCTTGCACATCACCGGCGCCCAGTCTGC
ACAACCCGCCAATGTCTCGGACAGGGCTTCTCTGTATGCCAGCCGCACTC
TGGCGGATCTGAAGAATGAATGTGTGAAGCGGTCCTTGAGATCTAGTGGC
TCCCAGTCCGAGGAAGAATCATGGCCGCCAATTCAACACTTCCCGTTCTA
GCAAGGCCGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGCCATCT
ATGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATCCCGAT
CCTTTCCGACATCTATACCCACTATGACCCGACCCAGTCGCAAGAGGCCC
CCATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACATCTCC
GCAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATCGATCC
CTTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGAGCTGA
AGAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAACTTTGG
AGTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCTCAGAA
ACACTAACTTGTCGAACGCCTTTCCAATCATGACTTCCTTCAGTCCCGTG
CCTTCAGCATCGCTATGAAGAGGATCAACGGCAGCTCTAGCGCTGAATGG
CAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCTCTCCCAGCAG
CACTCTACCACCCCATCCATCCGTCGGGGCTTGCACATCACCGGCGCCCA
GTCTGCACAACCCGCCAATGTCTCGGACAGGGCTTCTCTGTATGCCAGCC
GCACTCTGGCGGATCTGAAGAATGAATGTGTGAAGCGGTCCTTGAGATCT
AGTGGCTCCCAGTCCGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005439ATCC10864_005439Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005439-T1ATCC10864_005439-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005439-T1.cdsATCC10864_005439-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005439-T1.exon3ATCC10864_005439-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005439-T1.exon2ATCC10864_005439-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005439-T1.exon1ATCC10864_005439-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR003034
InterProIPR036361
PFAMPF02037
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:322870..323775 -
Powered by Drupal