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ATCC10864_005454-T1, ATCC10864_005454-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005454-T1
Unique NameATCC10864_005454-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:363284..365190+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005454-T1 ID=ATCC10864_005454-T1|Name=ATCC10864_005454-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1907bp|location=Sequence derived from alignment at MCQH01000142:363284..365190+ (Aspergillus niger ATCC 10864)
ATGATGCCCAACTCCACAGGGGCGATCACCGCAAACCCATTCGAAGAGCC
ACAGCGACGGATCAACGAGTACACTGCCCAGGAAATCGCAACTTTGCAAG
CTCGTCTCGATAAGAAGCTCGGCCCCGAATACATCTCTTCCAGGCCTGGG
GCTGCGGGACAGAGAGTACACTACTTGTCGGCCGATAAATGCATCAACCT
GGCTAACGAAGTTTTCGGGTTCAATGGCTGGTCAAGCTCGATTCAGAATA
TTCAGATTGATTTCGTCGAGGAGAGTCCCAATACTGGGAAGATCAGCCTG
GGTCTCTCTGTTATTGTGAGGGTGACTCTGAAAGACGGTACATATCACGA
GGTAGGCATCACTGTATTGCAGCGAGCTTGCCCTATATCTCAGCTAAGTC
TCGATTGGTATTAGGATATCGGTTACGGTCACATCGAGAACTGTAAAGGA
AAGGCTGCTGCTTTTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTCT
AAAGCGGGCTCTGAGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTACG
ATAAGGACTATGTGTCGAAGGTCACCAAAGTAAAGACTGTTCCGGTATGT
GACCGAGGTGTGGACAATCTATTCACGACGACTGACACGCTCTAGGCCAA
ATGGGATGTCGACGAACTGCACCGTCACCCAGACTTTGTTCCCAGGAAAG
AGCCCGTAAAACCAAAGCCCAGCCCGGAAGACGATGATCTACCACCTCGG
CCAACGGATGTTGGCAAGGACAGTAGTATCGACGATTCGATGGCATTTGA
TGGCGACGGGGAGTTCGGAAGTAAGCAACAATGGCATGTCACGATCCCTT
ACAACCGCTAACCATCACCTTAGGTGACCTATTTGATGAAGCCGACTTCG
GGGTAGGCGGAACAGGCAACCCAGACGAGGTAGTACTAGGACCAGAAACA
CAGAAGCAGCCACCGACGCCTCTAAATGGACCCAATGTGCCTCGACAGCC
ATTCAATAACAACGCCCGTGCACCGATGAGGCCCAACCCAGCCATGGTAA
CTCCATCCAAGCCGGAACGGCCCTTCAACCCAGCTCCTGGTGCCAGACAA
AACCCCGCTCCTCAGCCCTTTAATAGCAGACTCAACCCCTCCGCAGCCCA
AAATCAGCAAGCACCTCAACGACAACCCATGGCCCCTCAAGGGCCCCAGC
AAAACCTCCCCAACAACCGAATGATCCCACCAGCACAAGCAGCAGCAGCC
GCATCAACCACGGGTGGTGCCGTGCCCATCAAACGTGAATTCGGGGCATC
GAACACCAACGAACCTCCCAGACCCCAAGACACACTGCCCGGCACGCCCT
CCGCATCATTCTTCTCAGCTCGCGCAGTCGACCTCCTCCGCGACAACCCT
AACGGGATCCCATCCGGAGCCCCAGTCTTCGACCCACACGCGGAGAGTCC
CTCCATCCGCAAGACCGCAGGCATCGACCACAACAAGAGTCTTCCTGTCT
CCAGGCCCATGCTCGCCGGTGCCGGTGCCGCCTCCCCAGCAACAAACAAC
ACCCGAGACTTCGTCAACCCATCTCAAGATATGAATCGCAGGATCGGTGC
CCCGGGCATGAACAGTCCCATGAACAGACCTATGTCCACATCATCTTACC
GGCCCTTGACACGGCCAAACGTCAACGCCCCGGGTGCAGCTGCGGCTGCC
AATCGTGCAGCTACCCCGGGTCTTGCACCGCAGAACATGAACGGGAAACG
ACCCCCTCTGTCTGATGTGACGAATGCCTCGAACCCGAGTGGCGGCAGCG
GGCCTGCTCCACCGGGGGTCATTGAGAATGACCCGAAACGACCCAAGGTA
AACCCGGGCCCTGCTGCTGCGGCTGTTGCGGCGGCGCCGGCGCAGCAGCA
GCAGTGA
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Coding sequence (CDS) from alignment at MCQH01000142:363284..365190+

>ATCC10864_005454-T1 ID=ATCC10864_005454-T1|Name=ATCC10864_005454-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6960bp|location=Sequence derived from alignment at MCQH01000142:363284..365190+ (Aspergillus niger ATCC 10864)
ATGATGCCCAACTCCACAGGGGCGATCACCGCAAACCCATTCGAAGAGCC
ACAGCGACGGATCAACGAGTACACTGCCCAGGAAATCGCAACTTTGCAAG
CTCGTCTCGATAAGAAGCTCGGCCCCGAATACATCTCTTCCAGGCCTGGG
GCTGCGGGACAGAGAGTACACTACTTGTCGGCCGATAAATGCATCAACCT
GGCTAACGAAGTTTTCGGGTTCAATGGCTGGTCAAGCTCGATTCAGAATA
TTCAGATTGATTTCGTCGAGGAGAGTCCCAATACTGGGAAGATCAGCCTG
GGTCTCTCTGTTATTGTGAGGGTGACTCTGAAAGACGGTACATATCACGA
GGATATCGGTTACGGTCACATCGAGAACTGTAAAGGAAAGGCTGCTGCTT
TTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTCTAAAGCGGGCTCTG
AGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTACGATAAGGACTATGT
GTCGAAGGTCACCAAAGTAAAGACTGTTCCGGCCAAATGGGATGTCGACG
AACTGCACCGTCACCCAGACTTTGTTCCCAGGAAAGAGCCCGTAAAACCA
AAGCCCAGCCCGGAAGACGATGATCTACCACCTCGGCCAACGGATGTTGG
CAAGGACAGTAGTATCGACGATTCGATGGCATTTGATGGCGACGGGGAGT
TCGGAAGTGACCTATTTGATGAAGCCGACTTCGGGGTAGGCGGAACAGGC
AACCCAGACGAGGTAGTACTAGGACCAGAAACACAGAAGCAGCCACCGAC
GCCTCTAAATGGACCCAATGTGCCTCGACAGCCATTCAATAACAACGCCC
GTGCACCGATGAGGCCCAACCCAGCCATGGTAACTCCATCCAAGCCGGAA
CGGCCCTTCAACCCAGCTCCTGGTGCCAGACAAAACCCCGCTCCTCAGCC
CTTTAATAGCAGACTCAACCCCTCCGCAGCCCAAAATCAGCAAGCACCTC
AACGACAACCCATGGCCCCTCAAGGGCCCCAGCAAAACCTCCCCAACAAC
CGAATGATCCCACCAGCACAAGCAGCAGCAGCCGCATCAACCACGGGTGG
TGCCGTGCCCATCAAACGTGAATTCGGGGCATCGAACACCAACGAACCTC
CCAGACCCCAAGACACACTGCCCGGCACGCCCTCCGCATCATTCTTCTCA
GCTCGCGCAGTCGACCTCCTCCGCGACAACCCTAACGGGATCCCATCCGG
AGCCCCAGTCTTCGACCCACACGCGGAGAGTCCCTCCATCCGCAAGACCG
CAGGCATCGACCACAACAAGAGTCTTCCTGTCTCCAGGCCCATGCTCGCC
GGTGCCGGTGCCGCCTCCCCAGCAACAAACAACACCCGAGACTTCGTCAA
CCCATCTCAAGATATGAATCGCAGGATCGGTGCCCCGGGCATGAACAGTC
CCATGAACAGACCTATGTCCACATCATCTTACCGGCCCTTGACACGGCCA
AACGTCAACGCCCCGGGTGCAGCTGCGGCTGCCAATCGTGCAGCTACCCC
GGGTCTTGCACCGCAGAACATGAACGGGAAACGACCCCCTCTGTCTGATG
TGACGAATGCCTCGAACCCGAGTGGCGGCAGCGGGCCTGCTCCACCGGGG
GTCATTGAGAATGACCCGAAACGACCCAAGGTAAACCCGGGCCCTGCTGC
TGCGGCTGTTGCGGCGGCGCCGGCGCAGCAGCAGCAGTGAATGATGCCCA
ACTCCACAGGGGCGATCACCGCAAACCCATTCGAAGAGCCACAGCGACGG
ATCAACGAGTACACTGCCCAGGAAATCGCAACTTTGCAAGCTCGTCTCGA
TAAGAAGCTCGGCCCCGAATACATCTCTTCCAGGCCTGGGGCTGCGGGAC
AGAGAGTACACTACTTGTCGGCCGATAAATGCATCAACCTGGCTAACGAA
GTTTTCGGGTTCAATGGCTGGTCAAGCTCGATTCAGAATATTCAGATTGA
TTTCGTCGAGGAGAGTCCCAATACTGGGAAGATCAGCCTGGGTCTCTCTG
TTATTGTGAGGGTGACTCTGAAAGACGGTACATATCACGAGGATATCGGT
TACGGTCACATCGAGAACTGTAAAGGAAAGGCTGCTGCTTTTGAGAAAGC
TAAGAAAGAGGGGACAACCGATGCTCTAAAGCGGGCTCTGAGGAACTTCG
GCAATGTCCTGGGCAACTGTGTCTACGATAAGGACTATGTGTCGAAGGTC
ACCAAAGTAAAGACTGTTCCGGCCAAATGGGATGTCGACGAACTGCACCG
TCACCCAGACTTTGTTCCCAGGAAAGAGCCCGTAAAACCAAAGCCCAGCC
CGGAAGACGATGATCTACCACCTCGGCCAACGGATGTTGGCAAGGACAGT
AGTATCGACGATTCGATGGCATTTGATGGCGACGGGGAGTTCGGAAGTGA
CCTATTTGATGAAGCCGACTTCGGGGTAGGCGGAACAGGCAACCCAGACG
AGGTAGTACTAGGACCAGAAACACAGAAGCAGCCACCGACGCCTCTAAAT
GGACCCAATGTGCCTCGACAGCCATTCAATAACAACGCCCGTGCACCGAT
GAGGCCCAACCCAGCCATGGTAACTCCATCCAAGCCGGAACGGCCCTTCA
ACCCAGCTCCTGGTGCCAGACAAAACCCCGCTCCTCAGCCCTTTAATAGC
AGACTCAACCCCTCCGCAGCCCAAAATCAGCAAGCACCTCAACGACAACC
CATGGCCCCTCAAGGGCCCCAGCAAAACCTCCCCAACAACCGAATGATCC
CACCAGCACAAGCAGCAGCAGCCGCATCAACCACGGGTGGTGCCGTGCCC
ATCAAACGTGAATTCGGGGCATCGAACACCAACGAACCTCCCAGACCCCA
AGACACACTGCCCGGCACGCCCTCCGCATCATTCTTCTCAGCTCGCGCAG
TCGACCTCCTCCGCGACAACCCTAACGGGATCCCATCCGGAGCCCCAGTC
TTCGACCCACACGCGGAGAGTCCCTCCATCCGCAAGACCGCAGGCATCGA
CCACAACAAGAGTCTTCCTGTCTCCAGGCCCATGCTCGCCGGTGCCGGTG
CCGCCTCCCCAGCAACAAACAACACCCGAGACTTCGTCAACCCATCTCAA
GATATGAATCGCAGGATCGGTGCCCCGGGCATGAACAGTCCCATGAACAG
ACCTATGTCCACATCATCTTACCGGCCCTTGACACGGCCAAACGTCAACG
CCCCGGGTGCAGCTGCGGCTGCCAATCGTGCAGCTACCCCGGGTCTTGCA
CCGCAGAACATGAACGGGAAACGACCCCCTCTGTCTGATGTGACGAATGC
CTCGAACCCGAGTGGCGGCAGCGGGCCTGCTCCACCGGGGGTCATTGAGA
ATGACCCGAAACGACCCAAGGTAAACCCGGGCCCTGCTGCTGCGGCTGTT
GCGGCGGCGCCGGCGCAGCAGCAGCAGTGAATGATGCCCAACTCCACAGG
GGCGATCACCGCAAACCCATTCGAAGAGCCACAGCGACGGATCAACGAGT
ACACTGCCCAGGAAATCGCAACTTTGCAAGCTCGTCTCGATAAGAAGCTC
GGCCCCGAATACATCTCTTCCAGGCCTGGGGCTGCGGGACAGAGAGTACA
CTACTTGTCGGCCGATAAATGCATCAACCTGGCTAACGAAGTTTTCGGGT
TCAATGGCTGGTCAAGCTCGATTCAGAATATTCAGATTGATTTCGTCGAG
GAGAGTCCCAATACTGGGAAGATCAGCCTGGGTCTCTCTGTTATTGTGAG
GGTGACTCTGAAAGACGGTACATATCACGAGGATATCGGTTACGGTCACA
TCGAGAACTGTAAAGGAAAGGCTGCTGCTTTTGAGAAAGCTAAGAAAGAG
GGGACAACCGATGCTCTAAAGCGGGCTCTGAGGAACTTCGGCAATGTCCT
GGGCAACTGTGTCTACGATAAGGACTATGTGTCGAAGGTCACCAAAGTAA
AGACTGTTCCGGCCAAATGGGATGTCGACGAACTGCACCGTCACCCAGAC
TTTGTTCCCAGGAAAGAGCCCGTAAAACCAAAGCCCAGCCCGGAAGACGA
TGATCTACCACCTCGGCCAACGGATGTTGGCAAGGACAGTAGTATCGACG
ATTCGATGGCATTTGATGGCGACGGGGAGTTCGGAAGTGACCTATTTGAT
GAAGCCGACTTCGGGGTAGGCGGAACAGGCAACCCAGACGAGGTAGTACT
AGGACCAGAAACACAGAAGCAGCCACCGACGCCTCTAAATGGACCCAATG
TGCCTCGACAGCCATTCAATAACAACGCCCGTGCACCGATGAGGCCCAAC
CCAGCCATGGTAACTCCATCCAAGCCGGAACGGCCCTTCAACCCAGCTCC
TGGTGCCAGACAAAACCCCGCTCCTCAGCCCTTTAATAGCAGACTCAACC
CCTCCGCAGCCCAAAATCAGCAAGCACCTCAACGACAACCCATGGCCCCT
CAAGGGCCCCAGCAAAACCTCCCCAACAACCGAATGATCCCACCAGCACA
AGCAGCAGCAGCCGCATCAACCACGGGTGGTGCCGTGCCCATCAAACGTG
AATTCGGGGCATCGAACACCAACGAACCTCCCAGACCCCAAGACACACTG
CCCGGCACGCCCTCCGCATCATTCTTCTCAGCTCGCGCAGTCGACCTCCT
CCGCGACAACCCTAACGGGATCCCATCCGGAGCCCCAGTCTTCGACCCAC
ACGCGGAGAGTCCCTCCATCCGCAAGACCGCAGGCATCGACCACAACAAG
AGTCTTCCTGTCTCCAGGCCCATGCTCGCCGGTGCCGGTGCCGCCTCCCC
AGCAACAAACAACACCCGAGACTTCGTCAACCCATCTCAAGATATGAATC
GCAGGATCGGTGCCCCGGGCATGAACAGTCCCATGAACAGACCTATGTCC
ACATCATCTTACCGGCCCTTGACACGGCCAAACGTCAACGCCCCGGGTGC
AGCTGCGGCTGCCAATCGTGCAGCTACCCCGGGTCTTGCACCGCAGAACA
TGAACGGGAAACGACCCCCTCTGTCTGATGTGACGAATGCCTCGAACCCG
AGTGGCGGCAGCGGGCCTGCTCCACCGGGGGTCATTGAGAATGACCCGAA
ACGACCCAAGGTAAACCCGGGCCCTGCTGCTGCGGCTGTTGCGGCGGCGC
CGGCGCAGCAGCAGCAGTGAATGATGCCCAACTCCACAGGGGCGATCACC
GCAAACCCATTCGAAGAGCCACAGCGACGGATCAACGAGTACACTGCCCA
GGAAATCGCAACTTTGCAAGCTCGTCTCGATAAGAAGCTCGGCCCCGAAT
ACATCTCTTCCAGGCCTGGGGCTGCGGGACAGAGAGTACACTACTTGTCG
GCCGATAAATGCATCAACCTGGCTAACGAAGTTTTCGGGTTCAATGGCTG
GTCAAGCTCGATTCAGAATATTCAGATTGATTTCGTCGAGGAGAGTCCCA
ATACTGGGAAGATCAGCCTGGGTCTCTCTGTTATTGTGAGGGTGACTCTG
AAAGACGGTACATATCACGAGGATATCGGTTACGGTCACATCGAGAACTG
TAAAGGAAAGGCTGCTGCTTTTGAGAAAGCTAAGAAAGAGGGGACAACCG
ATGCTCTAAAGCGGGCTCTGAGGAACTTCGGCAATGTCCTGGGCAACTGT
GTCTACGATAAGGACTATGTGTCGAAGGTCACCAAAGTAAAGACTGTTCC
GGCCAAATGGGATGTCGACGAACTGCACCGTCACCCAGACTTTGTTCCCA
GGAAAGAGCCCGTAAAACCAAAGCCCAGCCCGGAAGACGATGATCTACCA
CCTCGGCCAACGGATGTTGGCAAGGACAGTAGTATCGACGATTCGATGGC
ATTTGATGGCGACGGGGAGTTCGGAAGTGACCTATTTGATGAAGCCGACT
TCGGGGTAGGCGGAACAGGCAACCCAGACGAGGTAGTACTAGGACCAGAA
ACACAGAAGCAGCCACCGACGCCTCTAAATGGACCCAATGTGCCTCGACA
GCCATTCAATAACAACGCCCGTGCACCGATGAGGCCCAACCCAGCCATGG
TAACTCCATCCAAGCCGGAACGGCCCTTCAACCCAGCTCCTGGTGCCAGA
CAAAACCCCGCTCCTCAGCCCTTTAATAGCAGACTCAACCCCTCCGCAGC
CCAAAATCAGCAAGCACCTCAACGACAACCCATGGCCCCTCAAGGGCCCC
AGCAAAACCTCCCCAACAACCGAATGATCCCACCAGCACAAGCAGCAGCA
GCCGCATCAACCACGGGTGGTGCCGTGCCCATCAAACGTGAATTCGGGGC
ATCGAACACCAACGAACCTCCCAGACCCCAAGACACACTGCCCGGCACGC
CCTCCGCATCATTCTTCTCAGCTCGCGCAGTCGACCTCCTCCGCGACAAC
CCTAACGGGATCCCATCCGGAGCCCCAGTCTTCGACCCACACGCGGAGAG
TCCCTCCATCCGCAAGACCGCAGGCATCGACCACAACAAGAGTCTTCCTG
TCTCCAGGCCCATGCTCGCCGGTGCCGGTGCCGCCTCCCCAGCAACAAAC
AACACCCGAGACTTCGTCAACCCATCTCAAGATATGAATCGCAGGATCGG
TGCCCCGGGCATGAACAGTCCCATGAACAGACCTATGTCCACATCATCTT
ACCGGCCCTTGACACGGCCAAACGTCAACGCCCCGGGTGCAGCTGCGGCT
GCCAATCGTGCAGCTACCCCGGGTCTTGCACCGCAGAACATGAACGGGAA
ACGACCCCCTCTGTCTGATGTGACGAATGCCTCGAACCCGAGTGGCGGCA
GCGGGCCTGCTCCACCGGGGGTCATTGAGAATGACCCGAAACGACCCAAG
GTAAACCCGGGCCCTGCTGCTGCGGCTGTTGCGGCGGCGCCGGCGCAGCA
GCAGCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045002double-strand break repair via single-strand annealing
GO:0000724double-strand break repair via homologous recombination
GO:0006281DNA repair
GO:0000730DNA recombinase assembly
GO:0006310DNA recombination
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005454ATCC10864_005454Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005454-T1.exon1ATCC10864_005454-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005454-T1.exon2ATCC10864_005454-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005454-T1.exon3ATCC10864_005454-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005454-T1.exon4ATCC10864_005454-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005454-T1.cdsATCC10864_005454-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005454-T1ATCC10864_005454-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004585
InterProIPR042525
PFAMPF04098
InterProIPR041247
InterProIPR007232
Properties
Property NameValue
NoteBUSCO:EOG09261PJZ
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:363284..365190 +
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