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ATCC10864_005591-T1, ATCC10864_005591-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005591-T1
Unique NameATCC10864_005591-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:196816..198033+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005591-T1 ID=ATCC10864_005591-T1|Name=ATCC10864_005591-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1218bp|location=Sequence derived from alignment at MCQH01000155:196816..198033+ (Aspergillus niger ATCC 10864)
ATGCCTGCCACCACGGCGGACGCCCTTTCCCTCGTTCAGCGCACCGTCAC
GGTCGCTCCGCTAGTTCTTCTCTCCGTCGCAGATCACTACGGCCGCTCGG
CCAAGGGTACCCGGAAACGTGTGGTTGGTGTGCTGCTGGGTGAGAACTCG
GGCCAGAATGTCCGGGTATCGAACAGCTTTGCGGGTGCGTCATTGACCTT
CTATTTACCTTCGGTATCTCTTTCAGTGTCCACGTGCTGACAGTTCCTTC
TCCTAGTACCCTTCGAGGAAGATGAGAAGGACCCCTCCGTTTGGTTCCTA
GATCACAACTTTGTCGAGTCGATGAGGGACATGTTCAAGAAGATCAATGC
TCGTGAGAAGCTGGTTGGATGGTATCACTCGGGCCCGAAGCTGCGGGCCT
CGGATTTGGAAATCAACGAACTCTTCAAGCGCTACACACCGAACCCTCTG
CTGGTGATTGTGGATGTCCAACCGAAGGAAGTCGGCGTTCCTACGGATGC
TTACTTTGCTGTGGATGAGATCAAGGATGTGAGTAACTATGCGCGCCGTC
GTACCGGACCTCGTTAAAGGACATATGGACTAATCATCACAATGCTGTAA
CAGGATGGCACCACAACATCAAAGACCTTCGTCCACACCCCGTCTATAAT
CGAAGCTGAGGAAGCTGAGGAAATTGGAGTGGAGCACCTTCTCCGGGATA
TCAGGGATGTCGCTGTCGGAACCCTCTCCACCCGCATAACGTCGCAGCTT
CAGTCGCTGCAGGGTCTGCACCTGCGTTTGCGCGACATCGGCCAATACCT
GCAGAAGGTTCTTGACCACGAACTCCCCGTCAACCACGCCATTTTGGGCA
ACCTCCAGGACGTCTTCAACCTCCTCCCCAACCTTTCCACACCAGCCGCC
ACGCCGCGCATCAGCGGCGCGCCCGAACAGCCGACGGAGAACAGCGAGCT
CGCACGGGCCATGAGCATCAAGACCAACGATCAATTAATGGCGATCTACT
TGAGCAGCTTGATCCGCGCCATCACCGCATTCCACGACTTGATCGAGAAC
AAGATCCAGAACCGGCAGCAACAAGAAGAGAACGAGCTGAAGAGGGAACA
GGAGGCCAACGCGGCCAAGACCGAGAAGGAGGCCGCGAAGAAGGCCAACA
GTGCCGCCAATGGAGAGCAGAAGGAGGGTCAAGACAAGGAGAAGGCCAAG
AAGAGCCAGAAGGAGTAG
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Coding sequence (CDS) from alignment at MCQH01000155:196816..198033+

>ATCC10864_005591-T1 ID=ATCC10864_005591-T1|Name=ATCC10864_005591-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3213bp|location=Sequence derived from alignment at MCQH01000155:196816..198033+ (Aspergillus niger ATCC 10864)
ATGCCTGCCACCACGGCGGACGCCCTTTCCCTCGTTCAGCGCACCGTCAC
GGTCGCTCCGCTAGTTCTTCTCTCCGTCGCAGATCACTACGGCCGCTCGG
CCAAGGGTACCCGGAAACGTGTGGTTGGTGTGCTGCTGGGTGAGAACTCG
GGCCAGAATGTCCGGGTATCGAACAGCTTTGCGGTACCCTTCGAGGAAGA
TGAGAAGGACCCCTCCGTTTGGTTCCTAGATCACAACTTTGTCGAGTCGA
TGAGGGACATGTTCAAGAAGATCAATGCTCGTGAGAAGCTGGTTGGATGG
TATCACTCGGGCCCGAAGCTGCGGGCCTCGGATTTGGAAATCAACGAACT
CTTCAAGCGCTACACACCGAACCCTCTGCTGGTGATTGTGGATGTCCAAC
CGAAGGAAGTCGGCGTTCCTACGGATGCTTACTTTGCTGTGGATGAGATC
AAGGATGATGGCACCACAACATCAAAGACCTTCGTCCACACCCCGTCTAT
AATCGAAGCTGAGGAAGCTGAGGAAATTGGAGTGGAGCACCTTCTCCGGG
ATATCAGGGATGTCGCTGTCGGAACCCTCTCCACCCGCATAACGTCGCAG
CTTCAGTCGCTGCAGGGTCTGCACCTGCGTTTGCGCGACATCGGCCAATA
CCTGCAGAAGGTTCTTGACCACGAACTCCCCGTCAACCACGCCATTTTGG
GCAACCTCCAGGACGTCTTCAACCTCCTCCCCAACCTTTCCACACCAGCC
GCCACGCCGCGCATCAGCGGCGCGCCCGAACAGCCGACGGAGAACAGCGA
GCTCGCACGGGCCATGAGCATCAAGACCAACGATCAATTAATGGCGATCT
ACTTGAGCAGCTTGATCCGCGCCATCACCGCATTCCACGACTTGATCGAG
AACAAGATCCAGAACCGGCAGCAACAAGAAGAGAACGAGCTGAAGAGGGA
ACAGGAGGCCAACGCGGCCAAGACCGAGAAGGAGGCCGCGAAGAAGGCCA
ACAGTGCCGCCAATGGAGAGCAGAAGGAGGGTCAAGACAAGGAGAAGGCC
AAGAAGAGCCAGAAGGAGTAGATGCCTGCCACCACGGCGGACGCCCTTTC
CCTCGTTCAGCGCACCGTCACGGTCGCTCCGCTAGTTCTTCTCTCCGTCG
CAGATCACTACGGCCGCTCGGCCAAGGGTACCCGGAAACGTGTGGTTGGT
GTGCTGCTGGGTGAGAACTCGGGCCAGAATGTCCGGGTATCGAACAGCTT
TGCGGTACCCTTCGAGGAAGATGAGAAGGACCCCTCCGTTTGGTTCCTAG
ATCACAACTTTGTCGAGTCGATGAGGGACATGTTCAAGAAGATCAATGCT
CGTGAGAAGCTGGTTGGATGGTATCACTCGGGCCCGAAGCTGCGGGCCTC
GGATTTGGAAATCAACGAACTCTTCAAGCGCTACACACCGAACCCTCTGC
TGGTGATTGTGGATGTCCAACCGAAGGAAGTCGGCGTTCCTACGGATGCT
TACTTTGCTGTGGATGAGATCAAGGATGATGGCACCACAACATCAAAGAC
CTTCGTCCACACCCCGTCTATAATCGAAGCTGAGGAAGCTGAGGAAATTG
GAGTGGAGCACCTTCTCCGGGATATCAGGGATGTCGCTGTCGGAACCCTC
TCCACCCGCATAACGTCGCAGCTTCAGTCGCTGCAGGGTCTGCACCTGCG
TTTGCGCGACATCGGCCAATACCTGCAGAAGGTTCTTGACCACGAACTCC
CCGTCAACCACGCCATTTTGGGCAACCTCCAGGACGTCTTCAACCTCCTC
CCCAACCTTTCCACACCAGCCGCCACGCCGCGCATCAGCGGCGCGCCCGA
ACAGCCGACGGAGAACAGCGAGCTCGCACGGGCCATGAGCATCAAGACCA
ACGATCAATTAATGGCGATCTACTTGAGCAGCTTGATCCGCGCCATCACC
GCATTCCACGACTTGATCGAGAACAAGATCCAGAACCGGCAGCAACAAGA
AGAGAACGAGCTGAAGAGGGAACAGGAGGCCAACGCGGCCAAGACCGAGA
AGGAGGCCGCGAAGAAGGCCAACAGTGCCGCCAATGGAGAGCAGAAGGAG
GGTCAAGACAAGGAGAAGGCCAAGAAGAGCCAGAAGGAGTAGATGCCTGC
CACCACGGCGGACGCCCTTTCCCTCGTTCAGCGCACCGTCACGGTCGCTC
CGCTAGTTCTTCTCTCCGTCGCAGATCACTACGGCCGCTCGGCCAAGGGT
ACCCGGAAACGTGTGGTTGGTGTGCTGCTGGGTGAGAACTCGGGCCAGAA
TGTCCGGGTATCGAACAGCTTTGCGGTACCCTTCGAGGAAGATGAGAAGG
ACCCCTCCGTTTGGTTCCTAGATCACAACTTTGTCGAGTCGATGAGGGAC
ATGTTCAAGAAGATCAATGCTCGTGAGAAGCTGGTTGGATGGTATCACTC
GGGCCCGAAGCTGCGGGCCTCGGATTTGGAAATCAACGAACTCTTCAAGC
GCTACACACCGAACCCTCTGCTGGTGATTGTGGATGTCCAACCGAAGGAA
GTCGGCGTTCCTACGGATGCTTACTTTGCTGTGGATGAGATCAAGGATGA
TGGCACCACAACATCAAAGACCTTCGTCCACACCCCGTCTATAATCGAAG
CTGAGGAAGCTGAGGAAATTGGAGTGGAGCACCTTCTCCGGGATATCAGG
GATGTCGCTGTCGGAACCCTCTCCACCCGCATAACGTCGCAGCTTCAGTC
GCTGCAGGGTCTGCACCTGCGTTTGCGCGACATCGGCCAATACCTGCAGA
AGGTTCTTGACCACGAACTCCCCGTCAACCACGCCATTTTGGGCAACCTC
CAGGACGTCTTCAACCTCCTCCCCAACCTTTCCACACCAGCCGCCACGCC
GCGCATCAGCGGCGCGCCCGAACAGCCGACGGAGAACAGCGAGCTCGCAC
GGGCCATGAGCATCAAGACCAACGATCAATTAATGGCGATCTACTTGAGC
AGCTTGATCCGCGCCATCACCGCATTCCACGACTTGATCGAGAACAAGAT
CCAGAACCGGCAGCAACAAGAAGAGAACGAGCTGAAGAGGGAACAGGAGG
CCAACGCGGCCAAGACCGAGAAGGAGGCCGCGAAGAAGGCCAACAGTGCC
GCCAATGGAGAGCAGAAGGAGGGTCAAGACAAGGAGAAGGCCAAGAAGAG
CCAGAAGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005838proteasome regulatory particle
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0070122isopeptidase activity
GO:0008237metallopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPN8ATCC10864_005591Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005591-T1.exon1ATCC10864_005591-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005591-T1.exon2ATCC10864_005591-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005591-T1.exon3ATCC10864_005591-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005591-T1.cdsATCC10864_005591-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005591-T1ATCC10864_005591-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000555
InterProIPR037518
InterProIPR024969
PFAMPF01398
PFAMPF13012
InterProIPR033858
Properties
Property NameValue
NoteMEROPS:MER0030134
NoteBUSCO:EOG09263KRO
Productproteasome regulatory particle subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:196816..198033 +
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