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ATCC10864_005594-T1, ATCC10864_005594-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005594-T1
Unique NameATCC10864_005594-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:209332..210457+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005594-T1 ID=ATCC10864_005594-T1|Name=ATCC10864_005594-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1126bp|location=Sequence derived from alignment at MCQH01000155:209332..210457+ (Aspergillus niger ATCC 10864)
ATGTATCAACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGT
GCATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATG
ACCCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCT
ACAGGAAACAAAATCTCCTACGTCTCTGCATCATCCATCGAAGGACCATG
GACCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGACCTCGATG
GCAACGATGATCTTTGGGTAACTATGTCCCACTGCAAACATGATTGGCCT
GTCTGACACTAGCCCAGGCCCCGGATGTCTCCTATGTAGATGGTCTCTAT
TATGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGG
ACTTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATGGCT
CCACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCC
AACCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTTCTG
GGATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCT
CTTCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAG
GGTTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTCGGC
AGGTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGGAGT
ATCATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCGTAAGT
ATATCCGACATTTAGAGAAAGTACTAAGTAGAGAAAGCTAACCTGGTGCT
AAGGTTGACTCCGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGT
GCTCGAAAGCCATGGAGAAGTCTATGGCCCTGGCGGACAGTAAGTGATTC
TGCAGCTGCCCCACCGATATTTATGCTTATCATGTTTTAGGGGTGTGTAT
GACGATCCCAACCTTGGTCCGGTTCTTTACTACCACTACATGAACACCAC
GATTGGATACGCGGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACT
TCTCTAGCGGATGGCCGGTTGTATAA
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Coding sequence (CDS) from alignment at MCQH01000155:209332..210457+

>ATCC10864_005594-T1 ID=ATCC10864_005594-T1|Name=ATCC10864_005594-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3864bp|location=Sequence derived from alignment at MCQH01000155:209332..210457+ (Aspergillus niger ATCC 10864)
ATGTATCAACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGT
GCATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATG
ACCCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCT
ACAGGAAACAAAATCTCCTACGTCTCTGCATCATCCATCGAAGGACCATG
GACCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGACCTCGATG
GCAACGATGATCTTTGGGCCCCGGATGTCTCCTATGTAGATGGTCTCTAT
TATGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGG
ACTTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATGGCT
CCACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCC
AACCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTTCTG
GGATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCT
CTTCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAG
GGTTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTCGGC
AGGTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGGAGT
ATCATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCGTTGAC
TCCGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGTGCTCGAAAG
CCATGGAGAAGTCTATGGCCCTGGCGGACAGGGTGTGTATGACGATCCCA
ACCTTGGTCCGGTTCTTTACTACCACTACATGAACACCACGATTGGATAC
GCGGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACTTCTCTAGCGG
ATGGCCGGTTGTATAAATGTATCAACTCCTATCAGTTGCCTCGGTTCCTC
TGCTGGCCAGCCTCGTGCATGGCTATGCTGACCCCGGAGCATGCTCGGGT
GTTTGTACCACCCATGACCCCGGTTTGATCCGGAGAGAGTCGGACGGTAC
ATACTTCCTCTTCTCTACAGGAAACAAAATCTCCTACGTCTCTGCATCAT
CCATCGAAGGACCATGGACCAGCGTTGGGTCTATGCTGCCGGATGGATCG
TCCATCGACCTCGATGGCAACGATGATCTTTGGGCCCCGGATGTCTCCTA
TGTAGATGGTCTCTATTATGTATACTACGCTGTGTCGACCTTTGGATCCC
AAGATTCCGCCATCGGACTTGCAACGTCCGAGACGATGGAATATGGCTCT
TGGACGGATCATGGCTCCACTGGCATTGCGTCTTCCTCAGCCAAGATTTA
TAATGCGATCGACCCCAACCTGATCTACGCCGATGGCACCTACTACATCA
ACTTTGGGTCGTTCTGGGATGACATTTACCAAGTCCCGATGAAGTCGACC
CCAACGGCAGCTGCCTCTTCCTCCTACAATCTTGCGTATGACCCGTCGGG
TACCCATGCGGAGGAGGGTTCCTATATGTTTCAGTACGGTGACTACTACT
ACCTCTTTTACTCGGCAGGTATCTGCTGTGGATACGATACATCCATGCCC
GCTTCCGGAGAGGAGTATCATATCAAGGTCTGCCGTTCGACTTCGCCCAC
GGGTGATTTCGTTGACTCCGACGGTACGGCGTGCACGGATGGCGGGGGCA
CGATGGTGCTCGAAAGCCATGGAGAAGTCTATGGCCCTGGCGGACAGGGT
GTGTATGACGATCCCAACCTTGGTCCGGTTCTTTACTACCACTACATGAA
CACCACGATTGGATACGCGGATTCTGACGCGCAGTTTGGGTGGAACACGA
TCGACTTCTCTAGCGGATGGCCGGTTGTATAAATGTATCAACTCCTATCA
GTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGTGCATGGCTATGCTGACCC
CGGAGCATGCTCGGGTGTTTGTACCACCCATGACCCCGGTTTGATCCGGA
GAGAGTCGGACGGTACATACTTCCTCTTCTCTACAGGAAACAAAATCTCC
TACGTCTCTGCATCATCCATCGAAGGACCATGGACCAGCGTTGGGTCTAT
GCTGCCGGATGGATCGTCCATCGACCTCGATGGCAACGATGATCTTTGGG
CCCCGGATGTCTCCTATGTAGATGGTCTCTATTATGTATACTACGCTGTG
TCGACCTTTGGATCCCAAGATTCCGCCATCGGACTTGCAACGTCCGAGAC
GATGGAATATGGCTCTTGGACGGATCATGGCTCCACTGGCATTGCGTCTT
CCTCAGCCAAGATTTATAATGCGATCGACCCCAACCTGATCTACGCCGAT
GGCACCTACTACATCAACTTTGGGTCGTTCTGGGATGACATTTACCAAGT
CCCGATGAAGTCGACCCCAACGGCAGCTGCCTCTTCCTCCTACAATCTTG
CGTATGACCCGTCGGGTACCCATGCGGAGGAGGGTTCCTATATGTTTCAG
TACGGTGACTACTACTACCTCTTTTACTCGGCAGGTATCTGCTGTGGATA
CGATACATCCATGCCCGCTTCCGGAGAGGAGTATCATATCAAGGTCTGCC
GTTCGACTTCGCCCACGGGTGATTTCGTTGACTCCGACGGTACGGCGTGC
ACGGATGGCGGGGGCACGATGGTGCTCGAAAGCCATGGAGAAGTCTATGG
CCCTGGCGGACAGGGTGTGTATGACGATCCCAACCTTGGTCCGGTTCTTT
ACTACCACTACATGAACACCACGATTGGATACGCGGATTCTGACGCGCAG
TTTGGGTGGAACACGATCGACTTCTCTAGCGGATGGCCGGTTGTATAAAT
GTATCAACTCCTATCAGTTGCCTCGGTTCCTCTGCTGGCCAGCCTCGTGC
ATGGCTATGCTGACCCCGGAGCATGCTCGGGTGTTTGTACCACCCATGAC
CCCGGTTTGATCCGGAGAGAGTCGGACGGTACATACTTCCTCTTCTCTAC
AGGAAACAAAATCTCCTACGTCTCTGCATCATCCATCGAAGGACCATGGA
CCAGCGTTGGGTCTATGCTGCCGGATGGATCGTCCATCGACCTCGATGGC
AACGATGATCTTTGGGCCCCGGATGTCTCCTATGTAGATGGTCTCTATTA
TGTATACTACGCTGTGTCGACCTTTGGATCCCAAGATTCCGCCATCGGAC
TTGCAACGTCCGAGACGATGGAATATGGCTCTTGGACGGATCATGGCTCC
ACTGGCATTGCGTCTTCCTCAGCCAAGATTTATAATGCGATCGACCCCAA
CCTGATCTACGCCGATGGCACCTACTACATCAACTTTGGGTCGTTCTGGG
ATGACATTTACCAAGTCCCGATGAAGTCGACCCCAACGGCAGCTGCCTCT
TCCTCCTACAATCTTGCGTATGACCCGTCGGGTACCCATGCGGAGGAGGG
TTCCTATATGTTTCAGTACGGTGACTACTACTACCTCTTTTACTCGGCAG
GTATCTGCTGTGGATACGATACATCCATGCCCGCTTCCGGAGAGGAGTAT
CATATCAAGGTCTGCCGTTCGACTTCGCCCACGGGTGATTTCGTTGACTC
CGACGGTACGGCGTGCACGGATGGCGGGGGCACGATGGTGCTCGAAAGCC
ATGGAGAAGTCTATGGCCCTGGCGGACAGGGTGTGTATGACGATCCCAAC
CTTGGTCCGGTTCTTTACTACCACTACATGAACACCACGATTGGATACGC
GGATTCTGACGCGCAGTTTGGGTGGAACACGATCGACTTCTCTAGCGGAT
GGCCGGTTGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005594ATCC10864_005594Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005594-T1.exon1ATCC10864_005594-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005594-T1.exon2ATCC10864_005594-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005594-T1.exon3ATCC10864_005594-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005594-T1.exon4ATCC10864_005594-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005594-T1.cdsATCC10864_005594-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005594-T1ATCC10864_005594-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016840
InterProIPR023296
PFAMPF04616
InterProIPR006710
Properties
Property NameValue
NoteCAZy:GH43
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:209332..210457 +
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