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ATCC10864_005631-T1, ATCC10864_005631-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005631-T1
Unique NameATCC10864_005631-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:310141..310466+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005631-T1 ID=ATCC10864_005631-T1|Name=ATCC10864_005631-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=326bp|location=Sequence derived from alignment at MCQH01000155:310141..310466+ (Aspergillus niger ATCC 10864)
ATGCCTCGTGCCGTCAGAGGTATCACAACCGCAGCACCGTCCAATTCCAA
CTATCGCTAACGAAGGCCTAAACAGGAGTCCTCATCGAGTGCGATCCGTC
CGTGAAAGCCATTATTCTCAAGTACGACGAAGAAAGACACGACTATATCG
TTGAAGACCTCGACGATGACCGTCATCTGGTCATCAAGGAGAGCCAGCTG
CAGAACCTGAAGGCGAGGTTGACAAAGGTAGGGATGCCGGAATGAGCTGT
TTGGGGCCTGACGCTGATGAGGCAACAGGAGCTTGACGATAAGGTTATGC
AGCCTGATGAATCGGAGTCGGAGTGA
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Coding sequence (CDS) from alignment at MCQH01000155:310141..310466+

>ATCC10864_005631-T1 ID=ATCC10864_005631-T1|Name=ATCC10864_005631-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=657bp|location=Sequence derived from alignment at MCQH01000155:310141..310466+ (Aspergillus niger ATCC 10864)
ATGCCTCGTGCCGTCAGAGGAGTCCTCATCGAGTGCGATCCGTCCGTGAA
AGCCATTATTCTCAAGTACGACGAAGAAAGACACGACTATATCGTTGAAG
ACCTCGACGATGACCGTCATCTGGTCATCAAGGAGAGCCAGCTGCAGAAC
CTGAAGGCGAGGTTGACAAAGGAGCTTGACGATAAGGTTATGCAGCCTGA
TGAATCGGAGTCGGAGTGAATGCCTCGTGCCGTCAGAGGAGTCCTCATCG
AGTGCGATCCGTCCGTGAAAGCCATTATTCTCAAGTACGACGAAGAAAGA
CACGACTATATCGTTGAAGACCTCGACGATGACCGTCATCTGGTCATCAA
GGAGAGCCAGCTGCAGAACCTGAAGGCGAGGTTGACAAAGGAGCTTGACG
ATAAGGTTATGCAGCCTGATGAATCGGAGTCGGAGTGAATGCCTCGTGCC
GTCAGAGGAGTCCTCATCGAGTGCGATCCGTCCGTGAAAGCCATTATTCT
CAAGTACGACGAAGAAAGACACGACTATATCGTTGAAGACCTCGACGATG
ACCGTCATCTGGTCATCAAGGAGAGCCAGCTGCAGAACCTGAAGGCGAGG
TTGACAAAGGAGCTTGACGATAAGGTTATGCAGCCTGATGAATCGGAGTC
GGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0006367transcription initiation from RNA polymerase II promoter
Vocabulary: Cellular Component
TermDefinition
GO:0000439transcription factor TFIIH core complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TFB5ATCC10864_005631Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005631-T1.exon1ATCC10864_005631-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005631-T1.exon2ATCC10864_005631-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005631-T1.exon3ATCC10864_005631-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005631-T1.cdsATCC10864_005631-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005631-T1ATCC10864_005631-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR035935
PFAMPF06331
InterProIPR009400
Properties
Property NameValue
NoteantiSMASH:Cluster_1000155.2
ProductTFIIH complex subunit tfb5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:310141..310466 +
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