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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000156:4569..5769- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005703-T1 ID=ATCC10864_005703-T1|Name=ATCC10864_005703-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1201bp|location=Sequence derived from alignment at MCQH01000156:4569..5769- (Aspergillus niger ATCC 10864)
ATGACTTTACAGGCAATCAGATATAATGATGGCGATTTGTCTATTATAGA
TCAGTTGCAGCTTCCATACGTTGAACGTTACATAACGGTACAATCGAGTG
AGGAAGCATGGCACGCAATAAAAGATATGCGAGTAAGAGGGGCACCCGCT
ATTGCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAAGCTCAT
GGCATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTG
CGAAAAAGCTCGATTATCTCGTGAGCAGCAGGCCTACAGCAGTGAATCTT
GCCGATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAG
GCCTGGATCGACCGGGCGCAGCGTCGCTACTGCTCTGATACAAGCAGCAG
AGGAAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCAT
GGTGCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGT
TCTCACTCATTGCAATACGGGGTAAGTACAGCGAAGCTCAACTGCAGGTT
ATCCGGTTCTAACCCGCTGTCAGCTCCCTTGCAACATCAGGATACGGCAC
TGCGCTCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATG
CTTACTGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCG
TTCGAATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCAT
GGCCGCTGCTCTACTTGCGAAGTCTGGTTCTAAAGTAGATGCCATCGTAG
TGGGGGCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGT
ACTTATGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTGAAGTTCCTCGT
CGCTGCACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAA
TCATAATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCG
CGTGCCAGCAATTCTACCAATGGGATTGAATTAGAAACTGTGCGCATAGC
AGCCGATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCA
CACTTATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCC
GGTGGACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATG
A back to topCoding sequence (CDS) from alignment at MCQH01000156:4569..5769- >ATCC10864_005703-T1 ID=ATCC10864_005703-T1|Name=ATCC10864_005703-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2298bp|location=Sequence derived from alignment at MCQH01000156:4569..5769- (Aspergillus niger ATCC 10864)
CTCCCTTGCAACATCAGGATACGGCACTGCGCTCGGGGTTATCCGCGCCC
TTGCGTCTGCAGACAATTTGAACCATGCTTACTGCACCGAGACACGACCC
TACAATCAAGGATCTCGGTTGACTGCGTTCGAATTGGTCCACGACCGTCT
CCCCGCCACCCTCATAACAGACTCCATGGCCGCTGCTCTACTTGCGAAGT
CTGGTTCTAAAGTAGATGCCATCGTAGTGGGGGCGGATAGGGTGGCTGCT
AACGGAGATACGGCGAATAAAATTGGTACTTATGGCCTCGCTGTGCTTGC
AAGGTATCACGGTGTGAAGTTCCTCGTCGCTGCACCGCTTACTACAATTG
ATCTGGCCACCCCATCCGGGAATGAAATCATAATCGAGGAACGTGCGGCC
TCCGAGGTCACAAATGTCAGAGGGCCGCGTGCCAGCAATTCTACCAATGG
GATTGAATTAGAAACTGTGCGCATAGCAGCCGATGGCATCGATGTCTGGA
ACCCGGCCTTTGATGTCACACCGTCCACACTTATTGACGGTATCATTACA
GAGAGGGGCGTGGTCGAGAAGGACGCCGGTGGACAATTTCACTTGGAGGA
CTTGTTTCGCAACTCATCTTCAACATGAATGACTTTACAGGCAATCAGAT
ATAATGATGGCGATTTGTCTATTATAGATCAGTTGCAGCTTCCATACGTT
GAACGTTACATAACGGTACAATCGAGTGAGGAAGCATGGCACGCAATAAA
AGATATGCGAGTAAGAGGGGCACCCGCTATTGCCATTGTAGCGGCCCTCG
CTCTTGCATCCGAGCTTCATAAGCTCATGGCATGCAATAACATACCTTCG
GAAGCCCCAGAGGTTCAAGCCTTTATTGCGAAAAAGCTCGATTATCTCGT
GAGCAGCAGGCCTACAGCAGTGAATCTTGCCGATGCTGCTCGGAAACTCA
GGGCCGTGGCGAGTGATCATACACAAAGGCCTGGATCGACCGGGCGCAGC
GTCGCTACTGCTCTGATACAAGCAGCAGAGGAAATGCTGAAGAAGGATAT
CGAGGACAATAAAAACATAGGAAAGCATGGTGCCCAATGGATCATGGCCA
ATGCCGCGGGTAAGCCGAAGGCTACTGTTCTCACTCATTGCAATACGGGC
TCCCTTGCAACATCAGGATACGGCACTGCGCTCGGGGTTATCCGCGCCCT
TGCGTCTGCAGACAATTTGAACCATGCTTACTGCACCGAGACACGACCCT
ACAATCAAGGATCTCGGTTGACTGCGTTCGAATTGGTCCACGACCGTCTC
CCCGCCACCCTCATAACAGACTCCATGGCCGCTGCTCTACTTGCGAAGTC
TGGTTCTAAAGTAGATGCCATCGTAGTGGGGGCGGATAGGGTGGCTGCTA
ACGGAGATACGGCGAATAAAATTGGTACTTATGGCCTCGCTGTGCTTGCA
AGGTATCACGGTGTGAAGTTCCTCGTCGCTGCACCGCTTACTACAATTGA
TCTGGCCACCCCATCCGGGAATGAAATCATAATCGAGGAACGTGCGGCCT
CCGAGGTCACAAATGTCAGAGGGCCGCGTGCCAGCAATTCTACCAATGGG
ATTGAATTAGAAACTGTGCGCATAGCAGCCGATGGCATCGATGTCTGGAA
CCCGGCCTTTGATGTCACACCGTCCACACTTATTGACGGTATCATTACAG
AGAGGGGCGTGGTCGAGAAGGACGCCGGTGGACAATTTCACTTGGAGGAC
TTGTTTCGCAACTCATCTTCAACATGAATGACTTTACAGGCAATCAGATA
TAATGATGGCGATTTGTCTATTATAGATCAGTTGCAGCTTCCATACGTTG
AACGTTACATAACGGTACAATCGAGTGAGGAAGCATGGCACGCAATAAAA
GATATGCGAGTAAGAGGGGCACCCGCTATTGCCATTGTAGCGGCCCTCGC
TCTTGCATCCGAGCTTCATAAGCTCATGGCATGCAATAACATACCTTCGG
AAGCCCCAGAGGTTCAAGCCTTTATTGCGAAAAAGCTCGATTATCTCGTG
AGCAGCAGGCCTACAGCAGTGAATCTTGCCGATGCTGCTCGGAAACTCAG
GGCCGTGGCGAGTGATCATACACAAAGGCCTGGATCGACCGGGCGCAGCG
TCGCTACTGCTCTGATACAAGCAGCAGAGGAAATGCTGAAGAAGGATATC
GAGGACAATAAAAACATAGGAAAGCATGGTGCCCAATGGATCATGGCCAA
TGCCGCGGGTAAGCCGAAGGCTACTGTTCTCACTCATTGCAATACGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044237 | cellular metabolic process |
| GO:0044249 | cellular biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR037171 |
| InterPro | IPR005251 |
| InterPro | IPR011559 |
| InterPro | IPR027363 |
| PFAM | PF01008 |
| InterPro | IPR000649 |
| InterPro | IPR042529 |
Properties
| Property Name | Value |
|---|
| Product | S-methyl-5-thioribose-1-phosphate isomerase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000156 | supercontig | MCQH01000156:4569..5769 - |
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