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ATCC10864_005712-T1, ATCC10864_005712-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005712-T1
Unique NameATCC10864_005712-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000156:26698..28314+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005712-T1 ID=ATCC10864_005712-T1|Name=ATCC10864_005712-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1617bp|location=Sequence derived from alignment at MCQH01000156:26698..28314+ (Aspergillus niger ATCC 10864)
ATGTTCTCTTTGCGGACGGCGCAACCCGCGCAGGTAAGTCGATGGTTCCT
TGCTTTTTGACCGATCAATTCCTTTGTCCGACCCGACTTCGCTCGCTCGA
TTCCTTGCCCTTACTTCCCTCCCACCGCCGCCCGCTACATCCTTTCGCCC
GGCTGAATTAGAGAGAAACGCCTGGGCGCACTTGGAATACAATCTCCCAC
CTGCTTTGCTCAATTGCCTTTCGTTGACGATCTACGATTTTGATTATTTC
CTATTCCCTCTAACGCGGTTATGCTTGGCAGTCTTTGCTCCGTCGCGTTG
CGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATGTGCGTCAGCC
CTTCCATTCGCATGCAGTACCGTACTGCTAGAGACACATGGTTTATTGAC
TCTATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCAC
TAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGGTACCTACATTC
GTCTCTTTCACAACTTGATCATTTTGCTGATGCTTCGGTGATTCGCTTTC
TTAAAGGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGACTATC
TTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGG
TGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCCATTG
CTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCG
GTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCT
GGATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCTACAAGA
CCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAACACCGAGGGT
GAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCT
GAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTG
GTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCATCCACAAGGCC
AACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACAAGGT
CGCCGAGAACTACCCGACTTTGGAGGTTAACGACATGATTGTCGACAACG
CCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGTTATG
CCCAACCTGTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTGTGGG
TGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCTGTGT
TCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGACCAG
GCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCCACCT
GGGATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTCTATGATGTGA
TCGGTGAGGGGTGAGTTTCAGACTTTTGTTTCAACCTTCCAGCTTGATTC
AGAGCTGTCGCTAATGCGAAATTCTCTAGTAAAACGAGGACCCGCGACAT
GGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGA
TGGAGGCTGCTCTGTAA
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Coding sequence (CDS) from alignment at MCQH01000156:26698..28314+

>ATCC10864_005712-T1 ID=ATCC10864_005712-T1|Name=ATCC10864_005712-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5790bp|location=Sequence derived from alignment at MCQH01000156:26698..28314+ (Aspergillus niger ATCC 10864)
ATGTTCTCTTTGCGGACGGCGCAACCCGCGCAGTCTTTGCTCCGTCGCGT
TGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATCCTTTGCTA
GCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGGCGGCAAATACACC
GTCACTCTTATCCCAGGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGT
CAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAG
ATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAG
GAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCT
CTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCC
GTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCC
GGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAA
CACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTG
TTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAG
TTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCAT
CCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCT
TCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACATGATT
GTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGT
TATGGTTATGCCCAACCTGTACGGTGGCATTCTCTCCAACATTGGTTCTG
CTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGAC
GTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGG
CAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTC
TACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTC
TATGATGTGATCGGTGAGGGTAAAACGAGGACCCGCGACATGGGTGGACA
GGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGATGGAGGCTG
CTCTGTAAATGTTCTCTTTGCGGACGGCGCAACCCGCGCAGTCTTTGCTC
CGTCGCGTTGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATC
CTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGGCGGCA
AATACACCGTCACTCTTATCCCAGGTGACGGAATCGGAGCCGAGGTTGCT
GAATCGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGA
GCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGC
TTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAG
GGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGT
TGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGA
ACATTCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATC
CGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCA
GGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCA
TTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTT
ACTTGCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCG
TAGCACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACG
ACATGATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAG
TTCGACGTTATGGTTATGCCCAACCTGTACGGTGGCATTCTCTCCAACAT
TGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGG
GCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGAC
ATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTC
TATGCTTCTACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCA
AGGCCGTCTATGATGTGATCGGTGAGGGTAAAACGAGGACCCGCGACATG
GGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGAT
GGAGGCTGCTCTGTAAATGTTCTCTTTGCGGACGGCGCAACCCGCGCAGT
CTTTGCTCCGTCGCGTTGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCG
GCAAGATCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTA
TGGCGGCAAATACACCGTCACTCTTATCCCAGGTGACGGAATCGGAGCCG
AGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATC
GAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTC
AGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGG
GTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCG
TTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCT
CATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTT
GCATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAG
TCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATC
TGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCA
AGAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGT
CTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGA
GGTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGC
CCCAGCAGTTCGACGTTATGGTTATGCCCAACCTGTACGGTGGCATTCTC
TCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTG
CAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTG
GCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTT
TCTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCATGCCAACCG
CATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGTAAAACGAGGACCC
GCGACATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTG
GATAAGATGGAGGCTGCTCTGTAAATGTTCTCTTTGCGGACGGCGCAACC
CGCGCAGTCTTTGCTCCGTCGCGTTGCGGCGCCGACTTCCTTCCGTTCCT
CCATCTCGGCAAGATCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCC
ACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGGTGACGGAAT
CGGAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACG
TTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAAC
AAACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAA
CAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCC
ACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCT
ATCGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGT
TGATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCG
AACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGC
GCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAA
CAACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTG
CGGATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCG
ACTTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGT
TTCCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCTGTACGGTG
GCATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTC
CCTGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCG
TCACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTA
TGATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCAT
GCCAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGTAAAAC
GAGGACCCGCGACATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGG
CAGTCTTGGATAAGATGGAGGCTGCTCTGTAAATGTTCTCTTTGCGGACG
GCGCAACCCGCGCAGTCTTTGCTCCGTCGCGTTGCGGCGCCGACTTCCTT
CCGTTCCTCCATCTCGGCAAGATCCTTTGCTAGCGTTCAGTCCGATATCT
TCAAGCCCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGGT
GACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGC
CGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACA
CCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTG
CGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCG
CTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTT
TCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCAC
GAGAATGTTGATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTC
TGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTA
TCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCT
CTTGCCAACAACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCAT
GAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGA
ACTACCCGACTTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATG
CAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCT
GTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTG
GTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCA
GGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCC
TAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGG
ACGACCATGCCAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAG
GGTAAAACGAGGACCCGCGACATGGGTGGACAGGCTACCACCCACGAGTT
CACCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0004449isocitrate dehydrogenase (NAD+) activity
GO:0000287magnesium ion binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDH1ATCC10864_005712Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005712-T1ATCC10864_005712-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005712-T1.exon1ATCC10864_005712-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005712-T1.exon2ATCC10864_005712-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005712-T1.exon3ATCC10864_005712-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005712-T1.exon4ATCC10864_005712-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005712-T1.exon5ATCC10864_005712-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005712-T1.cdsATCC10864_005712-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004434
PFAMPF00180
InterProIPR024084
InterProIPR019818
Properties
Property NameValue
Productisocitrate dehydrogenase (NAD( )) idh1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000156supercontigMCQH01000156:26698..28314 +
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