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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000162:62417..63833+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005798-T1 ID=ATCC10864_005798-T1|Name=ATCC10864_005798-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1417bp|location=Sequence derived from alignment at MCQH01000162:62417..63833+ (Aspergillus niger ATCC 10864)
ATGACAGCCTCGGTATTTCAGCTCAAGTGCGGGATCAAGGTATGCATCCA
TTTATCACATTAAACCCCCTAAATTCGCGCAATTTACTGACATTAATAGA
ATGATCCCTGGGGTAAGAAAGGCAAAAACTCCTTAGCTGGTGTTCTATGC
TCTAAGACCCCCGGTACGTTGGAATTAGAGAATGATCAGCATTATTCGGA
GGTATGTCCCTTTACCCACCTTATTCTCACAGAAAACGAGACTAATTAAC
TGTGACTACAGATGTGGATGGGCACGTATCCCACCGTCCCATCTCGTATC
CTGGCCACAGGTGAGCTTCTAAGCGAGTATCTCCAAAAGCACCCAGAGGT
CACCGGCGAAGGATACAAGAAATGGGGTGCGGAGGTGCCGTTTCTCCCTA
AGGTACATTCCTACCCTATACTACCCCCATCCGACAATCCAGATGAATAC
TAACGACAAACTTGTACAATTGAAGATCCTCTCCTTCCAAAAAGCCCTCC
CTCTCCAAATTCACCCTGACAAAACCCTCGCCGAACAACTCCACAAATCC
AACCCAGACAAATACTCCGACCCCAACCACAAGCCCGAAATCGCCATCGC
GCTCTCCAACTTCGAGCTCTTCGTCGGCTTCAAGCCCCTGCACGAGATCG
AAAACCTATTCAAACTCGCCCCCCTCCAACGCTTCCTCCCCACAGAAACC
AACGCCCCTACCTTCGACGATTCCCTTCTCCGCGAAATCTCGCGCATCCT
ACTCACCCTTCCCCCGCTCCTCGTCTCCGAAACCATCTCCTCCCTGCTCA
CTATCCCGGAGGCCCAATTCGGCCCGAATCAGCGATACATTCCAGGTCTA
CTCACTCGATTGAAGAAGATGTACCCGGAGACCGATAATGGTAGTCTTGT
TGCCACGATTCTTATGAATTACATAACCCTGGGGCCCGGGGAAGCAGTTT
GTGTCCCTGCGGATAGTATGCATGCGTACCTTACCGGAGATATCATGGAG
TGCATGGCCAGGTCGGATAATGTCATTAATACGGGATTTTGTCCCAAGGC
GGAGAGCGATGATGTGGATTTGTTTACGGGGGCGTTGAGTTTCAAGCCGC
ATGATGTGGAGAGTGCGCTTTTGAGGACGAAGAAAAGTGATGTTGGTGGT
TGTTGGAAGACGGAGGTTTATGAGCCGCCGTTTTCGGAGTTCTCGGTGCT
GGGGGTGAGGTTGGGGAAGGGGGAGAAGGAGGTGCATCGGGGGATTGGGG
GAGTGAGTTTGCTGGTGGTTGTAAGGGGAAATGGGTGGATGGAGGTGAAG
GGTGAGGAGAAGAAGTTTGAGCTGAGGGAAGGGTGGGTTTATTTCGTGGG
TGCTGGGGTTGAGGTCAGTTTTGAGACCGAGGGCGGGTTGTTGGTTTATA
GGCCTTTTGCGGAGTAG back to topCoding sequence (CDS) from alignment at MCQH01000162:62417..63833+ >ATCC10864_005798-T1 ID=ATCC10864_005798-T1|Name=ATCC10864_005798-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4896bp|location=Sequence derived from alignment at MCQH01000162:62417..63833+ (Aspergillus niger ATCC 10864)
ATGACAGCCTCGGTATTTCAGCTCAAGTGCGGGATCAAGAATGATCCCTG
GGGTAAGAAAGGCAAAAACTCCTTAGCTGGTGTTCTATGCTCTAAGACCC
CCGGTACGTTGGAATTAGAGAATGATCAGCATTATTCGGAGATGTGGATG
GGCACGTATCCCACCGTCCCATCTCGTATCCTGGCCACAGGTGAGCTTCT
AAGCGAGTATCTCCAAAAGCACCCAGAGGTCACCGGCGAAGGATACAAGA
AATGGGGTGCGGAGGTGCCGTTTCTCCCTAAGATCCTCTCCTTCCAAAAA
GCCCTCCCTCTCCAAATTCACCCTGACAAAACCCTCGCCGAACAACTCCA
CAAATCCAACCCAGACAAATACTCCGACCCCAACCACAAGCCCGAAATCG
CCATCGCGCTCTCCAACTTCGAGCTCTTCGTCGGCTTCAAGCCCCTGCAC
GAGATCGAAAACCTATTCAAACTCGCCCCCCTCCAACGCTTCCTCCCCAC
AGAAACCAACGCCCCTACCTTCGACGATTCCCTTCTCCGCGAAATCTCGC
GCATCCTACTCACCCTTCCCCCGCTCCTCGTCTCCGAAACCATCTCCTCC
CTGCTCACTATCCCGGAGGCCCAATTCGGCCCGAATCAGCGATACATTCC
AGGTCTACTCACTCGATTGAAGAAGATGTACCCGGAGACCGATAATGGTA
GTCTTGTTGCCACGATTCTTATGAATTACATAACCCTGGGGCCCGGGGAA
GCAGTTTGTGTCCCTGCGGATAGTATGCATGCGTACCTTACCGGAGATAT
CATGGAGTGCATGGCCAGGTCGGATAATGTCATTAATACGGGATTTTGTC
CCAAGGCGGAGAGCGATGATGTGGATTTGTTTACGGGGGCGTTGAGTTTC
AAGCCGCATGATGTGGAGAGTGCGCTTTTGAGGACGAAGAAAAGTGATGT
TGGTGGTTGTTGGAAGACGGAGGTTTATGAGCCGCCGTTTTCGGAGTTCT
CGGTGCTGGGGGTGAGGTTGGGGAAGGGGGAGAAGGAGGTGCATCGGGGG
ATTGGGGGAGTGAGTTTGCTGGTGGTTGTAAGGGGAAATGGGTGGATGGA
GGTGAAGGGTGAGGAGAAGAAGTTTGAGCTGAGGGAAGGGTGGGTTTATT
TCGTGGGTGCTGGGGTTGAGGTCAGTTTTGAGACCGAGGGCGGGTTGTTG
GTTTATAGGCCTTTTGCGGAGTAGATGACAGCCTCGGTATTTCAGCTCAA
GTGCGGGATCAAGAATGATCCCTGGGGTAAGAAAGGCAAAAACTCCTTAG
CTGGTGTTCTATGCTCTAAGACCCCCGGTACGTTGGAATTAGAGAATGAT
CAGCATTATTCGGAGATGTGGATGGGCACGTATCCCACCGTCCCATCTCG
TATCCTGGCCACAGGTGAGCTTCTAAGCGAGTATCTCCAAAAGCACCCAG
AGGTCACCGGCGAAGGATACAAGAAATGGGGTGCGGAGGTGCCGTTTCTC
CCTAAGATCCTCTCCTTCCAAAAAGCCCTCCCTCTCCAAATTCACCCTGA
CAAAACCCTCGCCGAACAACTCCACAAATCCAACCCAGACAAATACTCCG
ACCCCAACCACAAGCCCGAAATCGCCATCGCGCTCTCCAACTTCGAGCTC
TTCGTCGGCTTCAAGCCCCTGCACGAGATCGAAAACCTATTCAAACTCGC
CCCCCTCCAACGCTTCCTCCCCACAGAAACCAACGCCCCTACCTTCGACG
ATTCCCTTCTCCGCGAAATCTCGCGCATCCTACTCACCCTTCCCCCGCTC
CTCGTCTCCGAAACCATCTCCTCCCTGCTCACTATCCCGGAGGCCCAATT
CGGCCCGAATCAGCGATACATTCCAGGTCTACTCACTCGATTGAAGAAGA
TGTACCCGGAGACCGATAATGGTAGTCTTGTTGCCACGATTCTTATGAAT
TACATAACCCTGGGGCCCGGGGAAGCAGTTTGTGTCCCTGCGGATAGTAT
GCATGCGTACCTTACCGGAGATATCATGGAGTGCATGGCCAGGTCGGATA
ATGTCATTAATACGGGATTTTGTCCCAAGGCGGAGAGCGATGATGTGGAT
TTGTTTACGGGGGCGTTGAGTTTCAAGCCGCATGATGTGGAGAGTGCGCT
TTTGAGGACGAAGAAAAGTGATGTTGGTGGTTGTTGGAAGACGGAGGTTT
ATGAGCCGCCGTTTTCGGAGTTCTCGGTGCTGGGGGTGAGGTTGGGGAAG
GGGGAGAAGGAGGTGCATCGGGGGATTGGGGGAGTGAGTTTGCTGGTGGT
TGTAAGGGGAAATGGGTGGATGGAGGTGAAGGGTGAGGAGAAGAAGTTTG
AGCTGAGGGAAGGGTGGGTTTATTTCGTGGGTGCTGGGGTTGAGGTCAGT
TTTGAGACCGAGGGCGGGTTGTTGGTTTATAGGCCTTTTGCGGAGTAGAT
GACAGCCTCGGTATTTCAGCTCAAGTGCGGGATCAAGAATGATCCCTGGG
GTAAGAAAGGCAAAAACTCCTTAGCTGGTGTTCTATGCTCTAAGACCCCC
GGTACGTTGGAATTAGAGAATGATCAGCATTATTCGGAGATGTGGATGGG
CACGTATCCCACCGTCCCATCTCGTATCCTGGCCACAGGTGAGCTTCTAA
GCGAGTATCTCCAAAAGCACCCAGAGGTCACCGGCGAAGGATACAAGAAA
TGGGGTGCGGAGGTGCCGTTTCTCCCTAAGATCCTCTCCTTCCAAAAAGC
CCTCCCTCTCCAAATTCACCCTGACAAAACCCTCGCCGAACAACTCCACA
AATCCAACCCAGACAAATACTCCGACCCCAACCACAAGCCCGAAATCGCC
ATCGCGCTCTCCAACTTCGAGCTCTTCGTCGGCTTCAAGCCCCTGCACGA
GATCGAAAACCTATTCAAACTCGCCCCCCTCCAACGCTTCCTCCCCACAG
AAACCAACGCCCCTACCTTCGACGATTCCCTTCTCCGCGAAATCTCGCGC
ATCCTACTCACCCTTCCCCCGCTCCTCGTCTCCGAAACCATCTCCTCCCT
GCTCACTATCCCGGAGGCCCAATTCGGCCCGAATCAGCGATACATTCCAG
GTCTACTCACTCGATTGAAGAAGATGTACCCGGAGACCGATAATGGTAGT
CTTGTTGCCACGATTCTTATGAATTACATAACCCTGGGGCCCGGGGAAGC
AGTTTGTGTCCCTGCGGATAGTATGCATGCGTACCTTACCGGAGATATCA
TGGAGTGCATGGCCAGGTCGGATAATGTCATTAATACGGGATTTTGTCCC
AAGGCGGAGAGCGATGATGTGGATTTGTTTACGGGGGCGTTGAGTTTCAA
GCCGCATGATGTGGAGAGTGCGCTTTTGAGGACGAAGAAAAGTGATGTTG
GTGGTTGTTGGAAGACGGAGGTTTATGAGCCGCCGTTTTCGGAGTTCTCG
GTGCTGGGGGTGAGGTTGGGGAAGGGGGAGAAGGAGGTGCATCGGGGGAT
TGGGGGAGTGAGTTTGCTGGTGGTTGTAAGGGGAAATGGGTGGATGGAGG
TGAAGGGTGAGGAGAAGAAGTTTGAGCTGAGGGAAGGGTGGGTTTATTTC
GTGGGTGCTGGGGTTGAGGTCAGTTTTGAGACCGAGGGCGGGTTGTTGGT
TTATAGGCCTTTTGCGGAGTAGATGACAGCCTCGGTATTTCAGCTCAAGT
GCGGGATCAAGAATGATCCCTGGGGTAAGAAAGGCAAAAACTCCTTAGCT
GGTGTTCTATGCTCTAAGACCCCCGGTACGTTGGAATTAGAGAATGATCA
GCATTATTCGGAGATGTGGATGGGCACGTATCCCACCGTCCCATCTCGTA
TCCTGGCCACAGGTGAGCTTCTAAGCGAGTATCTCCAAAAGCACCCAGAG
GTCACCGGCGAAGGATACAAGAAATGGGGTGCGGAGGTGCCGTTTCTCCC
TAAGATCCTCTCCTTCCAAAAAGCCCTCCCTCTCCAAATTCACCCTGACA
AAACCCTCGCCGAACAACTCCACAAATCCAACCCAGACAAATACTCCGAC
CCCAACCACAAGCCCGAAATCGCCATCGCGCTCTCCAACTTCGAGCTCTT
CGTCGGCTTCAAGCCCCTGCACGAGATCGAAAACCTATTCAAACTCGCCC
CCCTCCAACGCTTCCTCCCCACAGAAACCAACGCCCCTACCTTCGACGAT
TCCCTTCTCCGCGAAATCTCGCGCATCCTACTCACCCTTCCCCCGCTCCT
CGTCTCCGAAACCATCTCCTCCCTGCTCACTATCCCGGAGGCCCAATTCG
GCCCGAATCAGCGATACATTCCAGGTCTACTCACTCGATTGAAGAAGATG
TACCCGGAGACCGATAATGGTAGTCTTGTTGCCACGATTCTTATGAATTA
CATAACCCTGGGGCCCGGGGAAGCAGTTTGTGTCCCTGCGGATAGTATGC
ATGCGTACCTTACCGGAGATATCATGGAGTGCATGGCCAGGTCGGATAAT
GTCATTAATACGGGATTTTGTCCCAAGGCGGAGAGCGATGATGTGGATTT
GTTTACGGGGGCGTTGAGTTTCAAGCCGCATGATGTGGAGAGTGCGCTTT
TGAGGACGAAGAAAAGTGATGTTGGTGGTTGTTGGAAGACGGAGGTTTAT
GAGCCGCCGTTTTCGGAGTTCTCGGTGCTGGGGGTGAGGTTGGGGAAGGG
GGAGAAGGAGGTGCATCGGGGGATTGGGGGAGTGAGTTTGCTGGTGGTTG
TAAGGGGAAATGGGTGGATGGAGGTGAAGGGTGAGGAGAAGAAGTTTGAG
CTGAGGGAAGGGTGGGTTTATTTCGTGGGTGCTGGGGTTGAGGTCAGTTT
TGAGACCGAGGGCGGGTTGTTGGTTTATAGGCCTTTTGCGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009298 | GDP-mannose biosynthetic process |
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0004476 | mannose-6-phosphate isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR014710 |
| InterPro | IPR016305 |
| InterPro | IPR001250 |
| PFAM | PF01238 |
| InterPro | IPR011051 |
| InterPro | IPR018050 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000162 | supercontig | MCQH01000162:62417..63833 + |
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