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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000162:71540..73339- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005802-T1 ID=ATCC10864_005802-T1|Name=ATCC10864_005802-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1800bp|location=Sequence derived from alignment at MCQH01000162:71540..73339- (Aspergillus niger ATCC 10864)
ATGATTGACCCCCTCAGTTTGCTGGTCCTTTTTGGTGTAGCTGGCAGCAG
CCAGCTCGCTTACGCATCGCCCGTGACGCAGAAAGCTGAGGCTACAAGGG
CAACTTCATACTCCTACAGTTCTTTTACCTACACGCAGGTCACTTCAACT
CGCTATGCTACTTCACTGAGTGCACCGCTGTCTTTTGCTACCCCATTCGC
TCCAGCATTTAGCAAGGCGTCAACTCTGCTTCCCAGTAATGTGACCTATA
CAACATACTCCTTGCAGCCAAGCCAGACCCTCTCTCCAGACGGAGAATAT
GGCCAGAGTGCATATGCTGCGTTGTGGGCCAACCTGTCGTATACTTCTGC
GCCTCCAATCACAACTACCGTCTCCCCTACACCAGTACCCTCTAGCGAGC
TGGTATACCCTCCAACTCTGTACAACAGAATTGATTATGCAGACCTGAAG
CTCCCATCTGATTTTATTTGGGGCGTCGCAGCCAGCGCATGGCAGATCGA
AGGAGGCCTCAAGCTCGAAGGCCGCGGCACATCTATCCTCGACACCATCG
GCGCTATCCAGAGTGACGACAACTCCTCAGATGCCAACATCGCCGACCTA
AGCTACTATATGTACAAACAGGACATTGCGCGACTAGCCGCCATAGGCAT
CCCATACCTCTCCTTCAGCATCTCCTGGCCACGCATCGTCCCTTTCGGCG
TAGCCAACTCACCCGTCAACACCGAGGGACTCCAGCACTACGACGATGTG
ATTAACACCTGTCTTCAATACGGCATCACCCCTATCGTAACCCTAAACCA
CGTCGACTTCCCGACAGCCCAAGCAGCCGACTACTCCACCCTCACGGACA
ACTTCCTCTACTATGCGAAGCAAGTAATGACCCGCTACGCAGACCGGGTC
CCCTACTGGGTGACCTTCAACGAGCCCAACATTGGCATCGGCAACAGCTT
CACCTCCTACAACGACCTCACGCACGTCCTAACCGCACACGCGGCCGTCT
ACCACTGGTACAAAGAGGAACTGCAAGGCACGGGCCAAATTACCATGAAG
TTCGCCAACAATCTCGGCGTTCCCCTGGATCCCTCCAACAGCAGCCACGT
CGACGCCGCCCTCCGATACCAAGACTTCATCCTGGGAATTATGGCCAACC
CATTATTCCTCGGCGAACAATACCCCTCGACTGTCCTCAACACGCCTAAC
CTTAACCTCACCCCACTCACCCAAACCCAACTCTCTACTATCAACAACAC
CGTCGACTTCTGGGCCTTCGACCCCTACGTCGCGCAATTCGCCCTCCCCC
CTCTAGAAGGAATCTCCGCCTGCGCAGCCAACTCTTCCAACAGCGCCTGG
CCCGAATGCGCCACTCTAACCATGATCCAATCCGACGGATGGCTGATGGG
CGACATGTCTAATGCATATTCCTCCATCGCGCCACAGTACGTCCGCCAGC
AACTAGGGTATGTCTGGAACACATTCAGGCCGTCAGGGATAGTGATCGCA
GAGTTTGGATTCAACCCATTCGACGAATCGTTAAAGGAGGGCAACGCCCA
GCGATATGATTTGGAACGTACGCTATATTACCAGGACTTCCTGGAGGAGA
TGCTGAAGGCGATTCATGAGGACGGAGTGAACGTGATTGGAACGCTGGCG
TGGAGTTATCTGGATAACAATGAGTTCGGGAGCTATGGGAACCAGTATGG
AATGCAGAGTGTGAATCGCACGGATGGGACGTGGGAGAGGAGGTATAAGA
GGAGTATTTTCGATTATGTGGATTTTTTCCACGAGCATGTTAGCAGTTAG
back to topCoding sequence (CDS) from alignment at MCQH01000162:71540..73339- >ATCC10864_005802-T1 ID=ATCC10864_005802-T1|Name=ATCC10864_005802-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1800bp|location=Sequence derived from alignment at MCQH01000162:71540..73339- (Aspergillus niger ATCC 10864)
ATGATTGACCCCCTCAGTTTGCTGGTCCTTTTTGGTGTAGCTGGCAGCAG
CCAGCTCGCTTACGCATCGCCCGTGACGCAGAAAGCTGAGGCTACAAGGG
CAACTTCATACTCCTACAGTTCTTTTACCTACACGCAGGTCACTTCAACT
CGCTATGCTACTTCACTGAGTGCACCGCTGTCTTTTGCTACCCCATTCGC
TCCAGCATTTAGCAAGGCGTCAACTCTGCTTCCCAGTAATGTGACCTATA
CAACATACTCCTTGCAGCCAAGCCAGACCCTCTCTCCAGACGGAGAATAT
GGCCAGAGTGCATATGCTGCGTTGTGGGCCAACCTGTCGTATACTTCTGC
GCCTCCAATCACAACTACCGTCTCCCCTACACCAGTACCCTCTAGCGAGC
TGGTATACCCTCCAACTCTGTACAACAGAATTGATTATGCAGACCTGAAG
CTCCCATCTGATTTTATTTGGGGCGTCGCAGCCAGCGCATGGCAGATCGA
AGGAGGCCTCAAGCTCGAAGGCCGCGGCACATCTATCCTCGACACCATCG
GCGCTATCCAGAGTGACGACAACTCCTCAGATGCCAACATCGCCGACCTA
AGCTACTATATGTACAAACAGGACATTGCGCGACTAGCCGCCATAGGCAT
CCCATACCTCTCCTTCAGCATCTCCTGGCCACGCATCGTCCCTTTCGGCG
TAGCCAACTCACCCGTCAACACCGAGGGACTCCAGCACTACGACGATGTG
ATTAACACCTGTCTTCAATACGGCATCACCCCTATCGTAACCCTAAACCA
CGTCGACTTCCCGACAGCCCAAGCAGCCGACTACTCCACCCTCACGGACA
ACTTCCTCTACTATGCGAAGCAAGTAATGACCCGCTACGCAGACCGGGTC
CCCTACTGGGTGACCTTCAACGAGCCCAACATTGGCATCGGCAACAGCTT
CACCTCCTACAACGACCTCACGCACGTCCTAACCGCACACGCGGCCGTCT
ACCACTGGTACAAAGAGGAACTGCAAGGCACGGGCCAAATTACCATGAAG
TTCGCCAACAATCTCGGCGTTCCCCTGGATCCCTCCAACAGCAGCCACGT
CGACGCCGCCCTCCGATACCAAGACTTCATCCTGGGAATTATGGCCAACC
CATTATTCCTCGGCGAACAATACCCCTCGACTGTCCTCAACACGCCTAAC
CTTAACCTCACCCCACTCACCCAAACCCAACTCTCTACTATCAACAACAC
CGTCGACTTCTGGGCCTTCGACCCCTACGTCGCGCAATTCGCCCTCCCCC
CTCTAGAAGGAATCTCCGCCTGCGCAGCCAACTCTTCCAACAGCGCCTGG
CCCGAATGCGCCACTCTAACCATGATCCAATCCGACGGATGGCTGATGGG
CGACATGTCTAATGCATATTCCTCCATCGCGCCACAGTACGTCCGCCAGC
AACTAGGGTATGTCTGGAACACATTCAGGCCGTCAGGGATAGTGATCGCA
GAGTTTGGATTCAACCCATTCGACGAATCGTTAAAGGAGGGCAACGCCCA
GCGATATGATTTGGAACGTACGCTATATTACCAGGACTTCCTGGAGGAGA
TGCTGAAGGCGATTCATGAGGACGGAGTGAACGTGATTGGAACGCTGGCG
TGGAGTTATCTGGATAACAATGAGTTCGGGAGCTATGGGAACCAGTATGG
AATGCAGAGTGTGAATCGCACGGATGGGACGTGGGAGAGGAGGTATAAGA
GGAGTATTTTCGATTATGTGGATTTTTTCCACGAGCATGTTAGCAGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001360 |
| InterPro | IPR017853 |
| PFAM | PF00232 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH1 |
| Note | SECRETED:SignalP(1-22) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000162 | supercontig | MCQH01000162:71540..73339 - |
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