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ATCC10864_005870-T1, ATCC10864_005870-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005870-T1
Unique NameATCC10864_005870-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:18894..20166+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005870-T1 ID=ATCC10864_005870-T1|Name=ATCC10864_005870-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1273bp|location=Sequence derived from alignment at MCQH01000164:18894..20166+ (Aspergillus niger ATCC 10864)
ATGTCCTCTGCCAATTACGTATGCGCCCTGACATGCCGTGTGTGCCGCGT
GGTTGCCTGGTTTTAACGGGAAGCAGATGTCTCCCTCTTCCTCGACGACG
CCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAA
AACGTGAGTGATTTACCCCACCTTTCCGTTGCGCGCCACGATTGCATGAT
GTACCTTGAAATCAAGTTGGGAATCTCTCTGAAAAACAACTGAGGAGAAT
ATATTAACTTGTGTTTCTGAACCCTTCGTTTGATTTTGCCTTATCATCAT
CAAGTTTACCGGTTGGTCTGCAGCTGCTAACTGTTCTCTTGAAGTGATAT
CAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCTG
CGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGAG
TCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATAT
TCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGGTAAGACACC
TCTTCTATCTCATCCCCTACCCACCACCCTCGTTGCAAGGATTATACGAC
GTTTCATGCACCACTCAGAACATCCCTTTTGGGGTTTGTTGATAAACAAA
CATCTTCAGTCCTCAGTATGAGCAGCAAGAATAAAACATGCCGTTACTTG
TCATCACGCCTATTTCATAGCCTTTTGCTGACTTGACCGGCTTAGATCCT
AGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTGG
AGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCC
CTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCCA
GTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCGG
ATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAAG
GATATTGCCAACCGCGTCAACGAAGCCATTCTGCTGAATCAAGGCGCTCG
TAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGGCTGAAC
AGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGGA
CTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTCGAC
CAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGGG
ATATCGACCCCATGATCTCATAA
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Coding sequence (CDS) from alignment at MCQH01000164:18894..20166+

>ATCC10864_005870-T1 ID=ATCC10864_005870-T1|Name=ATCC10864_005870-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3276bp|location=Sequence derived from alignment at MCQH01000164:18894..20166+ (Aspergillus niger ATCC 10864)
ATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGCCAACATG
GCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATA
TCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCT
GCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGA
GTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATA
TTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGAT
GAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTT
GATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTG
AGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTC
CTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAG
CCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATA
TTGCCAACCGCGTCAACGAAGCCATTCTGCTGAATCAAGGCGCTCGTAAA
GAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGGCTGAACAGAA
AGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGG
GCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTCGACCAGT
GCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGGGATAT
CGACCCCATGATCTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTT
CCTCGACGACGCCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTG
AAACCATCCAAAACTGATATCAATTATCTAGTCATGGATTACCTCATCAC
CAATGGCTACCCAGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCC
AACCCAGGGCAGATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACT
GCGATCCATTCTGGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCT
CAACCCACAGATCCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGC
GACTGCAGCTGGTGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGC
GACGTCAGCCCTGCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGC
ACCCACCAACCCCCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCT
TAATATTCCCGGCGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACAC
CCCGACCTTCGTAAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGCT
GAATCAAGGCGCTCGTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGC
GCGCGTGGGCTGAACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAG
AAGCTGGACCTTGGACTGGGCGATAATCCCAACACCCACAACAGTAATCC
CCTGGCCAGTTCGACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAA
TGACCAATAATGGGGATATCGACCCCATGATCTCATAAATGTCCTCTGCC
AATTACATGTCTCCCTCTTCCTCGACGACGCCAACATGGCATCAGTTCGA
ACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATATCAATTATCTAG
TCATGGATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTC
TCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGA
AAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCA
TTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGATGAAAATGCTCCT
TTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTTGATTCGCTCGTG
CATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTGAGTTTGCGAGCT
CGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTCCTTGAGGACCTT
GAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAGCCTGTCCCCGCC
ACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATATTGCCAACCGCG
TCAACGAAGCCATTCTGCTGAATCAAGGCGCTCGTAAAGAGGCCCGGCTA
CGCAACTTGGTTAAACTGCGCGCGTGGGCTGAACAGAAAGCCCGGGAGGC
TAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGGGCGATAATCCCA
ACACCCACAACAGTAATCCCCTGGCCAGTTCGACCAGTGCCAGTCACAAT
GGCTCTAACGACACCGTAATGACCAATAATGGGGATATCGACCCCATGAT
CTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGC
CAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAA
ACTGATATCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCC
AGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAG
ATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCT
GGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGAT
CCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGG
TGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCT
GCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCC
CCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGG
CGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGT
AAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGCTGAATCAAGGCGC
TCGTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGGCTG
AACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTT
GGACTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTC
GACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATG
GGGATATCGACCCCATGATCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005870ATCC10864_005870Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005870-T1.exon1ATCC10864_005870-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005870-T1.exon2ATCC10864_005870-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005870-T1.exon3ATCC10864_005870-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005870-T1.exon4ATCC10864_005870-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005870-T1.cdsATCC10864_005870-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005870-T1ATCC10864_005870-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006595
InterProIPR024964
PFAMPF08513
InterProIPR013144
InterProIPR006594
PFAMPF10607
Properties
Property NameValue
NoteBUSCO:EOG09264JK1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:18894..20166 +
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