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ATCC10864_005887-T1, ATCC10864_005887-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005887-T1
Unique NameATCC10864_005887-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:68729..69875-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005887-T1 ID=ATCC10864_005887-T1|Name=ATCC10864_005887-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1147bp|location=Sequence derived from alignment at MCQH01000164:68729..69875- (Aspergillus niger ATCC 10864)
ATGCCTCGCGGACCGTGAGTAACACGCCCAATGTTGTTCTTACTGCATGC
AGCGAGATTACCGGTGGAATTGCGTTTTCACAGGTCTATCTTCGCTACGG
CAGGAGAATTGAAGATTTTGAGGAGCTGAAAACTAACCACCATGCTCGTA
CAGTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCCTGG
ACAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCACAAG
CTCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGGTACGAGCC
ATCCAGCGATTACGAAGGAACCGAAAGAGAGGATCGGAATAGGAGGACTG
ACAGGTTTATAGTCTCAAGTACGCCCTTAACGGCCGTGAGACCAAGGCGA
TCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGCACCGACCCT
ACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAAGACCGGCGA
GAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCGTCCACCGCA
TCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAGCGTGTTCAG
CTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGCGAGAACGTG
AGTGCATACTCTCTACAAGTTCCGCGTCATTCAGTCGTTGGACCAAGCTT
TGGTTGATCGGCGGAGGACGACAGAACTAGAATCGCAGTTCTTTGCTGGA
ACACAGTAAGGAGCCGCAACTTCAGAACAAAGTGTGCTAACAAGGGCTTT
TTTATAGCATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTG
AAGATCGACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACAC
TGGTGTTGTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTG
TCGTTACCCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATC
AAGGACGCTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGT
CATCGGTCAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCA
AGCTCTCCATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAG
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Coding sequence (CDS) from alignment at MCQH01000164:68729..69875-

>ATCC10864_005887-T1 ID=ATCC10864_005887-T1|Name=ATCC10864_005887-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3108bp|location=Sequence derived from alignment at MCQH01000164:68729..69875- (Aspergillus niger ATCC 10864)
CATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTGAAGATCG
ACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACACTGGTGTT
GTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTGTCGTTAC
CCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATCAAGGACG
CTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGTCATCGGT
CAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCAAGCTCTC
CATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAGTCTCAAGTAC
GCCCTTAACGGCCGTGAGACCAAGGCGATCATGATGCAGCGTCTGATCAA
GGTCGACGGCAAGGTCCGCACCGACCCTACCTACCCCGCTGGTTTCATGG
ACGTCATCGGCATCGAGAAGACCGGCGAGAACTTCCGTCTCATCTACGAC
ACCAAGGGTCGCTTCACCGTCCACCGCATCCAGGCTGAGGAGGCCGAGTA
CAAGCTCTGCAAGGTCAAGCGTGTTCAGCTCGGCAAGGGCGGGATCCCAT
TCTTGGTTACGCACGATGCGAGAACTAAGAAGCACCAGAAGCGCCTTAGC
GCGCCTTCTCACTGGCTCCTGGACAAGATGTCCGGAACCTACGCCCCCAA
GGCCTCCCCCGGTCCTCACAAGCTCCGGGACTGCCTGCCCCTGATCGTCT
TCATCCGCAACCGATGCCTCGCGGACCCATCCGTTACCCCGACCCCGCCA
TCAAGGTCAACGACACCGTGAAGATCGACATTGCCACTGGCAAGATCGCC
GACTTCGTCAAGTTCGACACTGGTGTTGTCGCCATGGCCACCGGTGGTCG
TAACATGGGTCGTGTCGGTGTCGTTACCCACCGTGAGCGCCACGATGGTG
GTTTCAACATCGTCCACATCAAGGACGCTATTGACAACACCTTCGCCACC
CGTGAGTCCAACGTCTTCGTCATCGGTCAGGACAAGCCCTGGATCTCCCT
GCCCAAGGGCAAGGGTGTCAAGCTCTCCATCGCTGAGGAGCGTGACCGCC
GCCGTGCCCTCCAGTAGTCTCAAGTACGCCCTTAACGGCCGTGAGACCAA
GGCGATCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGCACCG
ACCCTACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAAGACC
GGCGAGAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCGTCCA
CCGCATCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAGCGTG
TTCAGCTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGCGAGA
ACTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCCTGGA
CAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCACAAGC
TCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGATGCCTCGCG
GACCCATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTGAAG
ATCGACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACACTGG
TGTTGTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTGTCG
TTACCCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATCAAG
GACGCTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGTCAT
CGGTCAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCAAGC
TCTCCATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAGTCTCAA
GTACGCCCTTAACGGCCGTGAGACCAAGGCGATCATGATGCAGCGTCTGA
TCAAGGTCGACGGCAAGGTCCGCACCGACCCTACCTACCCCGCTGGTTTC
ATGGACGTCATCGGCATCGAGAAGACCGGCGAGAACTTCCGTCTCATCTA
CGACACCAAGGGTCGCTTCACCGTCCACCGCATCCAGGCTGAGGAGGCCG
AGTACAAGCTCTGCAAGGTCAAGCGTGTTCAGCTCGGCAAGGGCGGGATC
CCATTCTTGGTTACGCACGATGCGAGAACTAAGAAGCACCAGAAGCGCCT
TAGCGCGCCTTCTCACTGGCTCCTGGACAAGATGTCCGGAACCTACGCCC
CCAAGGCCTCCCCCGGTCCTCACAAGCTCCGGGACTGCCTGCCCCTGATC
GTCTTCATCCGCAACCGATGCCTCGCGGACCCATCCGTTACCCCGACCCC
GCCATCAAGGTCAACGACACCGTGAAGATCGACATTGCCACTGGCAAGAT
CGCCGACTTCGTCAAGTTCGACACTGGTGTTGTCGCCATGGCCACCGGTG
GTCGTAACATGGGTCGTGTCGGTGTCGTTACCCACCGTGAGCGCCACGAT
GGTGGTTTCAACATCGTCCACATCAAGGACGCTATTGACAACACCTTCGC
CACCCGTGAGTCCAACGTCTTCGTCATCGGTCAGGACAAGCCCTGGATCT
CCCTGCCCAAGGGCAAGGGTGTCAAGCTCTCCATCGCTGAGGAGCGTGAC
CGCCGCCGTGCCCTCCAGTAGTCTCAAGTACGCCCTTAACGGCCGTGAGA
CCAAGGCGATCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGC
ACCGACCCTACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAA
GACCGGCGAGAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCG
TCCACCGCATCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAG
CGTGTTCAGCTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGC
GAGAACTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCC
TGGACAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCAC
AAGCTCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGATGCCT
CGCGGACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005887ATCC10864_005887Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005887-T1ATCC10864_005887-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005887-T1.cdsATCC10864_005887-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005887-T1.exon4ATCC10864_005887-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005887-T1.exon3ATCC10864_005887-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005887-T1.exon2ATCC10864_005887-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005887-T1.exon1ATCC10864_005887-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01479
PFAMPF16121
InterProIPR018199
InterProIPR038237
InterProIPR013845
InterProIPR013843
InterProIPR002942
InterProIPR000876
InterProIPR036986
PFAMPF00900
InterProIPR014722
PFAMPF08071
InterProIPR041982
InterProIPR032277
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:68729..69875 -
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