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ATCC10864_005893-T1, ATCC10864_005893-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005893-T1
Unique NameATCC10864_005893-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:89644..91077+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005893-T1 ID=ATCC10864_005893-T1|Name=ATCC10864_005893-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1434bp|location=Sequence derived from alignment at MCQH01000164:89644..91077+ (Aspergillus niger ATCC 10864)
ATGTCTAAAAAGCCCGCCGATGTGGCGTCGAAAGAGCGCAACGAATACAT
TCCGTCTTTCATTTCGAAAAAGCCGTTCTACATTGACGACGACTCTCAAG
CCAATGACTATCTAGAGCATCAACGTCTGCAAAAGTCGACGGCAGAGCAG
TCAAAATGGTACGAGCGTGGCAAGCGTGCTGGTCCCGCGGCCACCAAGTA
CCGGAAAGGCGCCTGTGAGAACTGCGGCGCCATGACCCACAAAACGAAAG
AGTGTCTGAGTCGCCCTCGGAAGCACGGTGCCAAATGGACCGGTAAAGAT
ATCCAGGCGGATGAAGTCATACAAGACGTCAACATGGGGTGGGATGCGAA
GAGAGATCGGTGGAACGGCTACGATCCGAGCGAATATCGACAAGTGGTGG
AGGAATACGAGGAACTTGAGAAATTGAAACGGGTCACAAAACAGGATGGC
GATAATGAGGGCAAGGATGGTGAGGGCGATGACGATGAAGATGCGCCCCA
GGAGGAAGCCCGCTACGCTGAGGAGTCCGACATGGGAAGACAACAGAGCA
CCGCCACTCGCAACCTCCGTATCCGAGAAGATACGGCAAAGTATTTGCTG
AACTTAGACCTTGATTCAGCCAAGTACGACCCGAAGACACGACGGATGGT
TGATATGGGTGCACAGGATGACCAAGCAGCAGCACTTGTTGCCGAGGAGA
ACTTTGTCCGCGCTTCGGGTGATGCTGCAGAGTTTGAGAAGGCACAAAGA
TATGCCTGGGAATCGCAGGAACGTGGTGCGCAGAAGGTCCACCTGCAGGC
AAACCCCACAGCTGGAGAAGTCATGCGGAAGAAGGAGGAGGCGGAGAGTT
TGGCCAAACGTGATGCTCAACGAAAGGCTCTTTTGGAAAAGTATGGTGGT
CAAGAGCACCTCGACCCCACACCGCTGCGGGATACAATGGTCGTCGAGAA
CGAACAGTTTGTCGAATATGACGAAACGGGTGCGATTAAGGGCGCACCAA
AGAAGGCGGCCAAATCGAAATATGCTGAAGACATCTTTACGAACAACCAC
ACATGCGTTTGGGGAAGTTGGTGGCACAACTTTGAGTGGGGATATGCCTG
CTGCTTTTCTACCGTCAAAAACAGTTACTGTACTGGTGAAGATGGGAAGC
GCGCATTCCAGGAAGCGGATCAGCTGCTGATGCTACCTGAGAACGGGGAC
GATGCTGATGAGCCGTCCGGTGAACATGAGGAAGCTAACGACGGGCATGA
AACTATTGACGATGCTCAAACCTCAGAGCAGCCAAAGGATTCATCTAACA
CCAATACGAAGAAGAGAACGCTCATCGAGGTGCAGTCTGGCATTACCGAG
GAAGAAATCGAATCATACAAGCGAAGCCGACTTGCGGCGGACGATCCTAT
GGCCGCATTCATCGGCAAAGACGACCTTGTATAG
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Coding sequence (CDS) from alignment at MCQH01000164:89644..91077+

>ATCC10864_005893-T1 ID=ATCC10864_005893-T1|Name=ATCC10864_005893-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1434bp|location=Sequence derived from alignment at MCQH01000164:89644..91077+ (Aspergillus niger ATCC 10864)
ATGTCTAAAAAGCCCGCCGATGTGGCGTCGAAAGAGCGCAACGAATACAT
TCCGTCTTTCATTTCGAAAAAGCCGTTCTACATTGACGACGACTCTCAAG
CCAATGACTATCTAGAGCATCAACGTCTGCAAAAGTCGACGGCAGAGCAG
TCAAAATGGTACGAGCGTGGCAAGCGTGCTGGTCCCGCGGCCACCAAGTA
CCGGAAAGGCGCCTGTGAGAACTGCGGCGCCATGACCCACAAAACGAAAG
AGTGTCTGAGTCGCCCTCGGAAGCACGGTGCCAAATGGACCGGTAAAGAT
ATCCAGGCGGATGAAGTCATACAAGACGTCAACATGGGGTGGGATGCGAA
GAGAGATCGGTGGAACGGCTACGATCCGAGCGAATATCGACAAGTGGTGG
AGGAATACGAGGAACTTGAGAAATTGAAACGGGTCACAAAACAGGATGGC
GATAATGAGGGCAAGGATGGTGAGGGCGATGACGATGAAGATGCGCCCCA
GGAGGAAGCCCGCTACGCTGAGGAGTCCGACATGGGAAGACAACAGAGCA
CCGCCACTCGCAACCTCCGTATCCGAGAAGATACGGCAAAGTATTTGCTG
AACTTAGACCTTGATTCAGCCAAGTACGACCCGAAGACACGACGGATGGT
TGATATGGGTGCACAGGATGACCAAGCAGCAGCACTTGTTGCCGAGGAGA
ACTTTGTCCGCGCTTCGGGTGATGCTGCAGAGTTTGAGAAGGCACAAAGA
TATGCCTGGGAATCGCAGGAACGTGGTGCGCAGAAGGTCCACCTGCAGGC
AAACCCCACAGCTGGAGAAGTCATGCGGAAGAAGGAGGAGGCGGAGAGTT
TGGCCAAACGTGATGCTCAACGAAAGGCTCTTTTGGAAAAGTATGGTGGT
CAAGAGCACCTCGACCCCACACCGCTGCGGGATACAATGGTCGTCGAGAA
CGAACAGTTTGTCGAATATGACGAAACGGGTGCGATTAAGGGCGCACCAA
AGAAGGCGGCCAAATCGAAATATGCTGAAGACATCTTTACGAACAACCAC
ACATGCGTTTGGGGAAGTTGGTGGCACAACTTTGAGTGGGGATATGCCTG
CTGCTTTTCTACCGTCAAAAACAGTTACTGTACTGGTGAAGATGGGAAGC
GCGCATTCCAGGAAGCGGATCAGCTGCTGATGCTACCTGAGAACGGGGAC
GATGCTGATGAGCCGTCCGGTGAACATGAGGAAGCTAACGACGGGCATGA
AACTATTGACGATGCTCAAACCTCAGAGCAGCCAAAGGATTCATCTAACA
CCAATACGAAGAAGAGAACGCTCATCGAGGTGCAGTCTGGCATTACCGAG
GAAGAAATCGAATCATACAAGCGAAGCCGACTTGCGGCGGACGATCCTAT
GGCCGCATTCATCGGCAAAGACGACCTTGTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0030628pre-mRNA 3'-splice site binding
GO:0000386second spliceosomal transesterification activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SLU7ATCC10864_005893Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005893-T1.exon1ATCC10864_005893-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005893-T1.cdsATCC10864_005893-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005893-T1ATCC10864_005893-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF11708
InterProIPR039974
InterProIPR021715
Properties
Property NameValue
NoteBUSCO:EOG09262NNS
ProductmRNA splicing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:89644..91077 +
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