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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000164:144896..145687+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005912-T1 ID=ATCC10864_005912-T1|Name=ATCC10864_005912-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=792bp|location=Sequence derived from alignment at MCQH01000164:144896..145687+ (Aspergillus niger ATCC 10864)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCCCTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACGGACGAGAAGACAGCTGAGGCGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTCAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGACCCGCGAGCA
GATCATAGCGGGTTCGGTACTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG back to topCoding sequence (CDS) from alignment at MCQH01000164:144896..145687+ >ATCC10864_005912-T1 ID=ATCC10864_005912-T1|Name=ATCC10864_005912-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=792bp|location=Sequence derived from alignment at MCQH01000164:144896..145687+ (Aspergillus niger ATCC 10864)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCCCTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACGGACGAGAAGACAGCTGAGGCGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTCAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGACCCGCGAGCA
GATCATAGCGGGTTCGGTACTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009264 | deoxyribonucleotide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016829 | lyase activity |
| GO:0003824 | catalytic activity |
| GO:0004139 | deoxyribose-phosphate aldolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR002915 |
| InterPro | IPR028581 |
| InterPro | IPR013785 |
| PFAM | PF01791 |
| InterPro | IPR011343 |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1000164.1 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000164 | supercontig | MCQH01000164:144896..145687 + |
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