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ATCC10864_005914-T1, ATCC10864_005914-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005914-T1
Unique NameATCC10864_005914-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:148466..150265-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005914-T1 ID=ATCC10864_005914-T1|Name=ATCC10864_005914-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1800bp|location=Sequence derived from alignment at MCQH01000164:148466..150265- (Aspergillus niger ATCC 10864)
ATGCTCTCTGAATGTTTCATCGCATCGACGCTGGCGTCCAGCAAAGCGCC
AGCGTCTGCGACCCTCCGCGATGTGGGAGTTTGCGTCCATGAATTCCAGC
CCACGCTGAACCTGCGCTCCACCTTCAAGAAGAGCTCGACCGCGGCCAAT
TGCTTGGCTGTAAGCCCGTCGCATGTGTTCGCTGCGCAGTCTGAGAAAGC
CATTGTACATGTGTATAGCAGGGAGAAAGGCAACCAGGAAGCCACCGTTC
CTTTCCCGGAGCGCATTCGCAGCATTGCTGTCGCCGGGGGCAAGAACGGC
GATGTTCTGGTTTTGGGAACTGAAGGGGGACGTTTGATTCTATGGGAGGT
AAATCAATCATTCACAGCCCCAATGGCGTCGCCAGCCATTCGTCATGGTT
TCAAACTAACAGCATGTGCTTCCTAGACATGCACCGGGCGACAAGTGGCT
ACGACAGCGTCGCATCTGCGGCCAGTGACCTCGCTCGTGGTCGATCCCAA
TTCCAACTTCATTCTGTCGGGCTCATCCGATGCCAGCATTCATGTTTGGT
CGTTAGTGGATCTCTTATCCTTTACGAAACCTCCATCCGGCCGTGATCGT
CAGCCTCCGAACTCCCCCATCCGTACCTTCTCCAACCACCGCGCCGCCAT
CACCGCCATCGCTGTGGGTCACAGCGCGGGTCGATACAACATTGCTCTGT
CTGCTGCAGATGATAGCACAGCCATTGCCTGGGATTATCACACCGGCCGT
CTCCTGCGCACCTTCCTCTTGCCTTCCAATGCGAAGTCGCTGGCCCTTGA
CCCGGCCGACCGGGCCTTCTATGTCGGCTACGAAGATGGCAGTATCCAGT
CGATCGACTTCTACAAGAACCAGTCCATCCAAAACCCTCTCCACGACCCC
TCCCTTCAATCAACTCCCTCGCAGCCACCCGCAGAGGATCGCTGGGCACC
GCCATCGGCCGATTGCGGCGCAGCGCATGCGCTCACTCTCTGCTACGATG
GAATGACGTTGCTCTCTGGCCATCAGAATGGCAAGGTTCTGTCATGGACA
GTTGGAAGGAAGAAGTACGCCTCGACCGTGGCAGACTACACACACCCTGT
CACGAACCTGTTTATGCTTCCTCCCAACGGTCTTCCTCATCCTTCCCTCG
ACCTCAAGCGGGTAGCACACACCATCGTCAAGCCCCGCTACGACTCTTCC
CTGTCCGAAACCTCCCAAGCAGCCGGCGCCGTTCCAGCCGATTACACCTT
CAGCACGCACCTCCTCCCCTCGATCTCATCCAAGCCCGACTCTGCTAAGC
CCGACCAATTCACCGAAGCCTTCTCCCACGCGTACTTCCCCGAATCCATG
CTCGAAGAAGGTCTCGCCGAATTAGCTGCCTTCAGCCAGCCCACTAGCAA
CGGAGCTCCAGTCTCCTCGATAGCACAGGGCATCAGCGACGAAGACTTAG
CAGCCAAGGATTCCCAAATATCCCAACTGGGGGAGGAACTCGCCACGCTG
AAGAAGAAGTCATCCGTCAATGAGACCGCCCGCCAATCCACAACAGACGA
AGTGACCAAACTTCGCTCGGACCTCGCCAACCTACACGACTATATCAATG
AGCTTCACGAGAAACAAGAACAGGCGCAGCGGGAGAAGATTCTCCGACAG
GCGCGGAAAGAAGAGCGAGAGACCCGCCGTCGGGAAGCTTGGTTTGCAGC
CGAAAAGAAGGGCAAGAAGGGAGATGCGGTTCTCCGTAAGATGGACGCCG
AGGATACCGTCATGACGAGTGATACGGATGATCAGAGCAGTGATGAGTAG
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Coding sequence (CDS) from alignment at MCQH01000164:148466..150265-

>ATCC10864_005914-T1 ID=ATCC10864_005914-T1|Name=ATCC10864_005914-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3444bp|location=Sequence derived from alignment at MCQH01000164:148466..150265- (Aspergillus niger ATCC 10864)
ACATGCACCGGGCGACAAGTGGCTACGACAGCGTCGCATCTGCGGCCAGT
GACCTCGCTCGTGGTCGATCCCAATTCCAACTTCATTCTGTCGGGCTCAT
CCGATGCCAGCATTCATGTTTGGTCGTTAGTGGATCTCTTATCCTTTACG
AAACCTCCATCCGGCCGTGATCGTCAGCCTCCGAACTCCCCCATCCGTAC
CTTCTCCAACCACCGCGCCGCCATCACCGCCATCGCTGTGGGTCACAGCG
CGGGTCGATACAACATTGCTCTGTCTGCTGCAGATGATAGCACAGCCATT
GCCTGGGATTATCACACCGGCCGTCTCCTGCGCACCTTCCTCTTGCCTTC
CAATGCGAAGTCGCTGGCCCTTGACCCGGCCGACCGGGCCTTCTATGTCG
GCTACGAAGATGGCAGTATCCAGTCGATCGACTTCTACAAGAACCAGTCC
ATCCAAAACCCTCTCCACGACCCCTCCCTTCAATCAACTCCCTCGCAGCC
ACCCGCAGAGGATCGCTGGGCACCGCCATCGGCCGATTGCGGCGCAGCGC
ATGCGCTCACTCTCTGCTACGATGGAATGACGTTGCTCTCTGGCCATCAG
AATGGCAAGGTTCTGTCATGGACAGTTGGAAGGAAGAAGTACGCCTCGAC
CGTGGCAGACTACACACACCCTGTCACGAACCTGTTTATGCTTCCTCCCA
ACGGTCTTCCTCATCCTTCCCTCGACCTCAAGCGGGTAGCACACACCATC
GTCAAGCCCCGCTACGACTCTTCCCTGTCCGAAACCTCCCAAGCAGCCGG
CGCCGTTCCAGCCGATTACACCTTCAGCACGCACCTCCTCCCCTCGATCT
CATCCAAGCCCGACTCTGCTAAGCCCGACCAATTCACCGAAGCCTTCTCC
CACGCGTACTTCCCCGAATCCATGCTCGAAGAAGGTCTCGCCGAATTAGC
TGCCTTCAGCCAGCCCACTAGCAACGGAGCTCCAGTCTCCTCGATAGCAC
AGGGCATCAGCGACGAAGACTTAGCAGCCAAGGATTCCCAAATATCCCAA
CTGGGGGAGGAACTCGCCACGCTGAAGAAGAAGTCATCCGTCAATGAGAC
CGCCCGCCAATCCACAACAGACGAAGTGACCAAACTTCGCTCGGACCTCG
CCAACCTACACGACTATATCAATGAGCTTCACGAGAAACAAGAACAGGCG
CAGCGGGAGAAGATTCTCCGACAGGCGCGGAAAGAAGAGCGAGAGACCCG
CCGTCGGGAAGCTTGGTTTGCAGCCGAAAAGAAGGGCAAGAAGGGAGATG
CGGTTCTCCGTAAGATGGACGCCGAGGATACCGTCATGACGAGTGATACG
GATGATCAGAGCAGTGATGAGTAGATGCTCTCTGAATGTTTCATCGCATC
GACGCTGGCGTCCAGCAAAGCGCCAGCGTCTGCGACCCTCCGCGATGTGG
GAGTTTGCGTCCATGAATTCCAGCCCACGCTGAACCTGCGCTCCACCTTC
AAGAAGAGCTCGACCGCGGCCAATTGCTTGGCTGTAAGCCCGTCGCATGT
GTTCGCTGCGCAGTCTGAGAAAGCCATTGTACATGTGTATAGCAGGGAGA
AAGGCAACCAGGAAGCCACCGTTCCTTTCCCGGAGCGCATTCGCAGCATT
GCTGTCGCCGGGGGCAAGAACGGCGATGTTCTGGTTTTGGGAACTGAAGG
GGGACGTTTGATTCTATGGGAGACATGCACCGGGCGACAAGTGGCTACGA
CAGCGTCGCATCTGCGGCCAGTGACCTCGCTCGTGGTCGATCCCAATTCC
AACTTCATTCTGTCGGGCTCATCCGATGCCAGCATTCATGTTTGGTCGTT
AGTGGATCTCTTATCCTTTACGAAACCTCCATCCGGCCGTGATCGTCAGC
CTCCGAACTCCCCCATCCGTACCTTCTCCAACCACCGCGCCGCCATCACC
GCCATCGCTGTGGGTCACAGCGCGGGTCGATACAACATTGCTCTGTCTGC
TGCAGATGATAGCACAGCCATTGCCTGGGATTATCACACCGGCCGTCTCC
TGCGCACCTTCCTCTTGCCTTCCAATGCGAAGTCGCTGGCCCTTGACCCG
GCCGACCGGGCCTTCTATGTCGGCTACGAAGATGGCAGTATCCAGTCGAT
CGACTTCTACAAGAACCAGTCCATCCAAAACCCTCTCCACGACCCCTCCC
TTCAATCAACTCCCTCGCAGCCACCCGCAGAGGATCGCTGGGCACCGCCA
TCGGCCGATTGCGGCGCAGCGCATGCGCTCACTCTCTGCTACGATGGAAT
GACGTTGCTCTCTGGCCATCAGAATGGCAAGGTTCTGTCATGGACAGTTG
GAAGGAAGAAGTACGCCTCGACCGTGGCAGACTACACACACCCTGTCACG
AACCTGTTTATGCTTCCTCCCAACGGTCTTCCTCATCCTTCCCTCGACCT
CAAGCGGGTAGCACACACCATCGTCAAGCCCCGCTACGACTCTTCCCTGT
CCGAAACCTCCCAAGCAGCCGGCGCCGTTCCAGCCGATTACACCTTCAGC
ACGCACCTCCTCCCCTCGATCTCATCCAAGCCCGACTCTGCTAAGCCCGA
CCAATTCACCGAAGCCTTCTCCCACGCGTACTTCCCCGAATCCATGCTCG
AAGAAGGTCTCGCCGAATTAGCTGCCTTCAGCCAGCCCACTAGCAACGGA
GCTCCAGTCTCCTCGATAGCACAGGGCATCAGCGACGAAGACTTAGCAGC
CAAGGATTCCCAAATATCCCAACTGGGGGAGGAACTCGCCACGCTGAAGA
AGAAGTCATCCGTCAATGAGACCGCCCGCCAATCCACAACAGACGAAGTG
ACCAAACTTCGCTCGGACCTCGCCAACCTACACGACTATATCAATGAGCT
TCACGAGAAACAAGAACAGGCGCAGCGGGAGAAGATTCTCCGACAGGCGC
GGAAAGAAGAGCGAGAGACCCGCCGTCGGGAAGCTTGGTTTGCAGCCGAA
AAGAAGGGCAAGAAGGGAGATGCGGTTCTCCGTAAGATGGACGCCGAGGA
TACCGTCATGACGAGTGATACGGATGATCAGAGCAGTGATGAGTAGATGC
TCTCTGAATGTTTCATCGCATCGACGCTGGCGTCCAGCAAAGCGCCAGCG
TCTGCGACCCTCCGCGATGTGGGAGTTTGCGTCCATGAATTCCAGCCCAC
GCTGAACCTGCGCTCCACCTTCAAGAAGAGCTCGACCGCGGCCAATTGCT
TGGCTGTAAGCCCGTCGCATGTGTTCGCTGCGCAGTCTGAGAAAGCCATT
GTACATGTGTATAGCAGGGAGAAAGGCAACCAGGAAGCCACCGTTCCTTT
CCCGGAGCGCATTCGCAGCATTGCTGTCGCCGGGGGCAAGAACGGCGATG
TTCTGGTTTTGGGAACTGAAGGGGGACGTTTGATTCTATGGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005914ATCC10864_005914Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005914-T1ATCC10864_005914-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005914-T1.cdsATCC10864_005914-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005914-T1.exon2ATCC10864_005914-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005914-T1.exon1ATCC10864_005914-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR001680
InterProIPR036322
PFAMPF00400
Properties
Property NameValue
NoteSMCOG1173:WD-40 repeat-containing protein
NoteantiSMASH:Cluster_1000164.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:148466..150265 -
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