You are here

ATCC10864_005939-T1, ATCC10864_005939-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005939-T1
Unique NameATCC10864_005939-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:211060..212329+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005939-T1 ID=ATCC10864_005939-T1|Name=ATCC10864_005939-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1270bp|location=Sequence derived from alignment at MCQH01000164:211060..212329+ (Aspergillus niger ATCC 10864)
ATGCGCTCCTTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC TCTATGCCCCACATCCTCAATCCTGCGCATCGCTCTCAACAGAACAGGAA CAGCAGCAGGACCAGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC AACACCACCCAGCTTCGCTTCTACAACAACAACCAATTTACCGACGACCA GCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGTCGTCCGCACAGGCC GGAAACATGGTCCGGGACTGATCATTCTCGGTGCGCCATAACCCCGTCCA TTCCAACCTCATAACCATACACTAACATACAATGATGAAATACAGCACTA ATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGA GTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCC CGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGAT TACCGCCGTGTCGTCGCGACGGGGACTCTGCGACATGATCAGGAGATGCT GGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGC CGCTGGAGCGCGAGGGTGGGAGTACGGTGTTAGTGAATCGGGGGTGGATT AGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAG GGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGT GGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGGAAGTTT TATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGT TTGGATTGAGGAGACTATGGGTATGTTATTCTTCCTGCTTCAATTTGTCT TTTCGACTTGGTTTGGCTTTGGCTATGTATTGGGACGAAGAAGCTAATCT AGGATGCTGGATCAGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCC AAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCA CAGCCAGTATATCTTTACTTGGTAAGTTTCTTTCCTCCGTTCCTCGGATG CTGCATGACTGCATGGCTGCATGGCTGCATGGCTGCATGGCTGCATGGAT CCTGGCTAACGGCTGCGCAGGTACGGCTTGTCGCTGGCAACCTCCATCAT GCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGC GCCAGAACCGGAACTGGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000164:211060..212329+

>ATCC10864_005939-T1 ID=ATCC10864_005939-T1|Name=ATCC10864_005939-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4044bp|location=Sequence derived from alignment at MCQH01000164:211060..212329+ (Aspergillus niger ATCC 10864)
ATGCGCTCCTTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC
TCTATGCCCCACATCCTCAATCCTGCGCATCGCTCTCAACAGAACAGGAA
CAGCAGCAGGACCAGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAGCTTCGCTTCTACAACAACAACCAATTTACCGACGACCA
GCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGTCGTCCGCACAGGCC
GGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC
TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCT
AATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACCCC
CGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC
GCGACGGGGACTCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCAT
GCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGG
GTGGGAGTACGGTGTTAGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG
GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGG
AGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAATATGT
TTACGCCGGATAATGTGCCGGCTGAGGGGAAGTTTTATTTCCCTGATATT
GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGAC
TATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTC
CTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGCCAGTAT
ATCTTTACTTGGTACGGCTTGTCGCTGGCAACCTCCATCATGCTGTGGAT
GATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAACC
GGAACTGGTAGATGCGCTCCTTCCTCTCCGTCCTCTCCCGGACGGGCTCA
AGAACCACTCCTCTATGCCCCACATCCTCAATCCTGCGCATCGCTCTCAA
CAGAACAGGAACAGCAGCAGGACCAGACTCCCTCTGCACGCGCTGCCTCC
GCCGCACCAACAACACCACCCAGCTTCGCTTCTACAACAACAACCAATTT
ACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGTCGT
CCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCC
CCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGG
AAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCT
GCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACC
GCCGTGTCGTCGCGACGGGGACTCTGCGACATGATCAGGAGATGCTGGTG
GGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCT
GGAGCGCGAGGGTGGGAGTACGGTGTTAGTGAATCGGGGGTGGATTAGTC
GGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCG
CTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAA
GAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGGAAGTTTTATT
TCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGG
ATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGC
CAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACC
ACAGCCAGTATATCTTTACTTGGTACGGCTTGTCGCTGGCAACCTCCATC
ATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGT
GCGCCAGAACCGGAACTGGTAGATGCGCTCCTTCCTCTCCGTCCTCTCCC
GGACGGGCTCAAGAACCACTCCTCTATGCCCCACATCCTCAATCCTGCGC
ATCGCTCTCAACAGAACAGGAACAGCAGCAGGACCAGACTCCCTCTGCAC
GCGCTGCCTCCGCCGCACCAACAACACCACCCAGCTTCGCTTCTACAACA
ACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCC
TCCCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCT
CGCACTAATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAAC
GCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATC
AAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGA
GTTCGATTACCGCCGTGTCGTCGCGACGGGGACTCTGCGACATGATCAGG
AGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTG
GTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTAGTGAATCGGGG
GTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGG
AAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGG
GAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGG
GAAGTTTTATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTC
AGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCGATG
GATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCT
CAAGAACAACCACAGCCAGTATATCTTTACTTGGTACGGCTTGTCGCTGG
CAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCT
ACTCGGCGTGTGCGCCAGAACCGGAACTGGTAGATGCGCTCCTTCCTCTC
CGTCCTCTCCCGGACGGGCTCAAGAACCACTCCTCTATGCCCCACATCCT
CAATCCTGCGCATCGCTCTCAACAGAACAGGAACAGCAGCAGGACCAGAC
TCCCTCTGCACGCGCTGCCTCCGCCGCACCAACAACACCACCCAGCTTCG
CTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCG
TCGATGCCCCCTCCCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGA
CTGATCATTCTCGCACTAATCCCCATAATCTCCTTCGCCCTCGGAACATG
GCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAG
ACCGGCTAATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCC
GCGATCTCCGAGTTCGATTACCGCCGTGTCGTCGCGACGGGGACTCTGCG
ACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATG
GGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTA
GTGAATCGGGGGTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATAGATT
GAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGG
GATTGTTGAGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTG
CCGGCTGAGGGGAAGTTTTATTTCCCTGATATTGAGCAGATGGCGGAGTT
GACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGG
TTGAGGCGATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCT
GAAGTCAACCTCAAGAACAACCACAGCCAGTATATCTTTACTTGGTACGG
CTTGTCGCTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTC
CCAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005939ATCC10864_005939Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005939-T1.exon1ATCC10864_005939-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005939-T1.exon2ATCC10864_005939-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005939-T1.exon3ATCC10864_005939-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005939-T1.exon4ATCC10864_005939-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005939-T1.cdsATCC10864_005939-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005939-T1ATCC10864_005939-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02104
InterProIPR002994
Properties
Property NameValue
NoteBUSCO:EOG09263V60
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:211060..212329 +