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ATCC10864_006666-T1, ATCC10864_006666-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006666-T1
Unique NameATCC10864_006666-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:324783..326459+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006666-T1 ID=ATCC10864_006666-T1|Name=ATCC10864_006666-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1677bp|location=Sequence derived from alignment at MCQH01000169:324783..326459+ (Aspergillus niger ATCC 10864)
ATGTCGCCGGATCTACCTTGCATTGTCTTTGCGAGGTCCTTTTTCCATAG
GCACGATAGAGATGATAACGCAGAGCGCCATGCTAGACATGAGACACCTA
AGCAGATCGACGAGCATGCTCACCGGCGAAAGCACTCGTCAGACTCAGAA
AAGACACTTACAGTCGAGGACTGGGCAACAAGTCGCGAGAACCCACACAA
CTGGCCGCTAGCAAAGACAATCATCACATCCCTCATAGTATACGTCTACA
CGTAAGTCCACCCAATCACACCTCGCAAACAAAAGTACCAATCTAAAAGT
ACAGTTTCGTGGTGTATGCTGGGTCATCCATGTTCATTACGGCAGTCCCG
TTGGTCATGCAGGAGCTGCACATCTCCGAGCAACGCGCCATGTTAGGGCT
GTCCATCTACGTGCTTGGGTGTACGACTGACCCCCTTCAATGCTATACCA
TGACCTTATACTAACCTCAACAGACGGCGTCGGACCCCTCCTCTGGGGCC
CGCTCAGCGAGATCCCTCGCATCGGACGATCAGTCGTCTACGTCGGAACA
TTCATAGCATTCATCCTCGTCACGATCGGAGCCGCCGAAGTATCGAACTA
CAGCGCATTCGTCTTCCTCCGCTTCTTGCAGGGGCTCTTCGGCAGCCCGT
GCCTCGCCAACGGTGGCGCCTCCATGCATGACCTTTACCCCGAATCCCAG
TTCCCCTACGCCCTCGCTCTATGGGTAGCTGCAGCGTACTGCGGCCCGGC
TCTCGGGCCCCTGCTCACCAACAGCCTGGTCAACAACATCTCCTGGAAAT
GGACCATGTGGCTCCTCGCCTGTATGTCCGGCCCGGTATGCATCCTGCTG
TTTCTCCTCCCTGAAACTTACGCCCCGACCATACGATACCGCAGCAGTGC
ATTCAATACCAACAGCAGCAACGACAATAACAGCGATAGTACAAGTGACA
ACCCCCTTGCCAAACTAAAATTCTACCTCGTCAAACCAGTCCAAATCACC
CTCCAAGATCCTGCCATCCTCTTCGCCAACATCTACACCTCCTTTATTAC
GGCACGTATTATACCTTCTTCGACGCCTTTCCCATCGGGTACCCACCCGT
CTATAATGTATCCTCTACCACCCTCAGCTTATTCTACCTGTCAGTCCTAG
TAGGGTGCTTCCTCGCAGTATTCGCCTACTTCACTTATCTCTCCCTCCCT
AACTACCTCCGCAAACACCATCTCCATCACAACACCCCCAAATCCACCTC
AATCCCTCACCCAACCCACGAACGACACCTCATCCCCGCCATCCCGGCTA
CCTTCCTCGTCCCCATCTCCCTCTTCCTCTACGGCTGGACCCTCCGCCCC
TCCATCCACTGGATCGTCAGCATCATCGGCGTGACATTGTACGCCAGCGC
GGTGTTTATCATTTTACAATGTCTCTCCATGTATATACCTAGTATATATC
CCGAGTACGCGGCGAGTCTGTTCGCCGCGAATGACTTCTGTCGGAGTACG
TTGGCTGCTGGCGCGGTGCATTTTGGGATCCCCCTATATCAGAATCTGGG
GATGGCGAGGGGGTCGAGTGTCCTGGGAGGTGTCAGTGTGTTGGGGGTTT
TGGGACTCTTGGGAATTTATTGGTTCGGGGAGAGACTGAGGAAGAAGTCG
AGGTTTGTGGAGAGGTTGGTTGAGTAG
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Coding sequence (CDS) from alignment at MCQH01000169:324783..326459+

>ATCC10864_006666-T1 ID=ATCC10864_006666-T1|Name=ATCC10864_006666-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6060bp|location=Sequence derived from alignment at MCQH01000169:324783..326459+ (Aspergillus niger ATCC 10864)
ATGTCGCCGGATCTACCTTGCATTGTCTTTGCGAGGTCCTTTTTCCATAG
GCACGATAGAGATGATAACGCAGAGCGCCATGCTAGACATGAGACACCTA
AGCAGATCGACGAGCATGCTCACCGGCGAAAGCACTCGTCAGACTCAGAA
AAGACACTTACAGTCGAGGACTGGGCAACAAGTCGCGAGAACCCACACAA
CTGGCCGCTAGCAAAGACAATCATCACATCCCTCATAGTATACGTCTACA
CTTTCGTGGTGTATGCTGGGTCATCCATGTTCATTACGGCAGTCCCGTTG
GTCATGCAGGAGCTGCACATCTCCGAGCAACGCGCCATGTTAGGGCTGTC
CATCTACGTGCTTGGGTACGGCGTCGGACCCCTCCTCTGGGGCCCGCTCA
GCGAGATCCCTCGCATCGGACGATCAGTCGTCTACGTCGGAACATTCATA
GCATTCATCCTCGTCACGATCGGAGCCGCCGAAGTATCGAACTACAGCGC
ATTCGTCTTCCTCCGCTTCTTGCAGGGGCTCTTCGGCAGCCCGTGCCTCG
CCAACGGTGGCGCCTCCATGCATGACCTTTACCCCGAATCCCAGTTCCCC
TACGCCCTCGCTCTATGGGTAGCTGCAGCGTACTGCGGCCCGGCTCTCGG
GCCCCTGCTCACCAACAGCCTGGTCAACAACATCTCCTGGAAATGGACCA
TGTGGCTCCTCGCCTGTATGTCCGGCCCGGTATGCATCCTGCTGTTTCTC
CTCCCTGAAACTTACGCCCCGACCATACGATACCGCAGCAGTGCATTCAA
TACCAACAGCAGCAACGACAATAACAGCGATAGTACAAGTGACAACCCCC
TTGCCAAACTAAAATTCTACCTCGTCAAACCAGTCCAAATCACCCTCCAA
GATCCTGCCATCCTCTTCGCCAACATCTACACCTCCTTTATTACGGCACG
TATTATACCTTCTTCGACGCCTTTCCCATCGGTCCTAGTAGGGTGCTTCC
TCGCAGTATTCGCCTACTTCACTTATCTCTCCCTCCCTAACTACCTCCGC
AAACACCATCTCCATCACAACACCCCCAAATCCACCTCAATCCCTCACCC
AACCCACGAACGACACCTCATCCCCGCCATCCCGGCTACCTTCCTCGTCC
CCATCTCCCTCTTCCTCTACGGCTGGACCCTCCGCCCCTCCATCCACTGG
ATCGTCAGCATCATCGGCGTGACATTGTACGCCAGCGCGGTGTTTATCAT
TTTACAATGTCTCTCCATGTATATACCTAGTATATATCCCGAGTACGCGG
CGAGTCTGTTCGCCGCGAATGACTTCTGTCGGAGTACGTTGGCTGCTGGC
GCGGTGCATTTTGGGATCCCCCTATATCAGAATCTGGGGATGGCGAGGGG
GTCGAGTGTCCTGGGAGGTGTCAGTGTGTTGGGGGTTTTGGGACTCTTGG
GAATTTATTGGTTCGGGGAGAGACTGAGGAAGAAGTCGAGGTTTGTGGAG
AGGTTGGTTGAGTAGATGTCGCCGGATCTACCTTGCATTGTCTTTGCGAG
GTCCTTTTTCCATAGGCACGATAGAGATGATAACGCAGAGCGCCATGCTA
GACATGAGACACCTAAGCAGATCGACGAGCATGCTCACCGGCGAAAGCAC
TCGTCAGACTCAGAAAAGACACTTACAGTCGAGGACTGGGCAACAAGTCG
CGAGAACCCACACAACTGGCCGCTAGCAAAGACAATCATCACATCCCTCA
TAGTATACGTCTACACTTTCGTGGTGTATGCTGGGTCATCCATGTTCATT
ACGGCAGTCCCGTTGGTCATGCAGGAGCTGCACATCTCCGAGCAACGCGC
CATGTTAGGGCTGTCCATCTACGTGCTTGGGTACGGCGTCGGACCCCTCC
TCTGGGGCCCGCTCAGCGAGATCCCTCGCATCGGACGATCAGTCGTCTAC
GTCGGAACATTCATAGCATTCATCCTCGTCACGATCGGAGCCGCCGAAGT
ATCGAACTACAGCGCATTCGTCTTCCTCCGCTTCTTGCAGGGGCTCTTCG
GCAGCCCGTGCCTCGCCAACGGTGGCGCCTCCATGCATGACCTTTACCCC
GAATCCCAGTTCCCCTACGCCCTCGCTCTATGGGTAGCTGCAGCGTACTG
CGGCCCGGCTCTCGGGCCCCTGCTCACCAACAGCCTGGTCAACAACATCT
CCTGGAAATGGACCATGTGGCTCCTCGCCTGTATGTCCGGCCCGGTATGC
ATCCTGCTGTTTCTCCTCCCTGAAACTTACGCCCCGACCATACGATACCG
CAGCAGTGCATTCAATACCAACAGCAGCAACGACAATAACAGCGATAGTA
CAAGTGACAACCCCCTTGCCAAACTAAAATTCTACCTCGTCAAACCAGTC
CAAATCACCCTCCAAGATCCTGCCATCCTCTTCGCCAACATCTACACCTC
CTTTATTACGGCACGTATTATACCTTCTTCGACGCCTTTCCCATCGGTCC
TAGTAGGGTGCTTCCTCGCAGTATTCGCCTACTTCACTTATCTCTCCCTC
CCTAACTACCTCCGCAAACACCATCTCCATCACAACACCCCCAAATCCAC
CTCAATCCCTCACCCAACCCACGAACGACACCTCATCCCCGCCATCCCGG
CTACCTTCCTCGTCCCCATCTCCCTCTTCCTCTACGGCTGGACCCTCCGC
CCCTCCATCCACTGGATCGTCAGCATCATCGGCGTGACATTGTACGCCAG
CGCGGTGTTTATCATTTTACAATGTCTCTCCATGTATATACCTAGTATAT
ATCCCGAGTACGCGGCGAGTCTGTTCGCCGCGAATGACTTCTGTCGGAGT
ACGTTGGCTGCTGGCGCGGTGCATTTTGGGATCCCCCTATATCAGAATCT
GGGGATGGCGAGGGGGTCGAGTGTCCTGGGAGGTGTCAGTGTGTTGGGGG
TTTTGGGACTCTTGGGAATTTATTGGTTCGGGGAGAGACTGAGGAAGAAG
TCGAGGTTTGTGGAGAGGTTGGTTGAGTAGATGTCGCCGGATCTACCTTG
CATTGTCTTTGCGAGGTCCTTTTTCCATAGGCACGATAGAGATGATAACG
CAGAGCGCCATGCTAGACATGAGACACCTAAGCAGATCGACGAGCATGCT
CACCGGCGAAAGCACTCGTCAGACTCAGAAAAGACACTTACAGTCGAGGA
CTGGGCAACAAGTCGCGAGAACCCACACAACTGGCCGCTAGCAAAGACAA
TCATCACATCCCTCATAGTATACGTCTACACTTTCGTGGTGTATGCTGGG
TCATCCATGTTCATTACGGCAGTCCCGTTGGTCATGCAGGAGCTGCACAT
CTCCGAGCAACGCGCCATGTTAGGGCTGTCCATCTACGTGCTTGGGTACG
GCGTCGGACCCCTCCTCTGGGGCCCGCTCAGCGAGATCCCTCGCATCGGA
CGATCAGTCGTCTACGTCGGAACATTCATAGCATTCATCCTCGTCACGAT
CGGAGCCGCCGAAGTATCGAACTACAGCGCATTCGTCTTCCTCCGCTTCT
TGCAGGGGCTCTTCGGCAGCCCGTGCCTCGCCAACGGTGGCGCCTCCATG
CATGACCTTTACCCCGAATCCCAGTTCCCCTACGCCCTCGCTCTATGGGT
AGCTGCAGCGTACTGCGGCCCGGCTCTCGGGCCCCTGCTCACCAACAGCC
TGGTCAACAACATCTCCTGGAAATGGACCATGTGGCTCCTCGCCTGTATG
TCCGGCCCGGTATGCATCCTGCTGTTTCTCCTCCCTGAAACTTACGCCCC
GACCATACGATACCGCAGCAGTGCATTCAATACCAACAGCAGCAACGACA
ATAACAGCGATAGTACAAGTGACAACCCCCTTGCCAAACTAAAATTCTAC
CTCGTCAAACCAGTCCAAATCACCCTCCAAGATCCTGCCATCCTCTTCGC
CAACATCTACACCTCCTTTATTACGGCACGTATTATACCTTCTTCGACGC
CTTTCCCATCGGTCCTAGTAGGGTGCTTCCTCGCAGTATTCGCCTACTTC
ACTTATCTCTCCCTCCCTAACTACCTCCGCAAACACCATCTCCATCACAA
CACCCCCAAATCCACCTCAATCCCTCACCCAACCCACGAACGACACCTCA
TCCCCGCCATCCCGGCTACCTTCCTCGTCCCCATCTCCCTCTTCCTCTAC
GGCTGGACCCTCCGCCCCTCCATCCACTGGATCGTCAGCATCATCGGCGT
GACATTGTACGCCAGCGCGGTGTTTATCATTTTACAATGTCTCTCCATGT
ATATACCTAGTATATATCCCGAGTACGCGGCGAGTCTGTTCGCCGCGAAT
GACTTCTGTCGGAGTACGTTGGCTGCTGGCGCGGTGCATTTTGGGATCCC
CCTATATCAGAATCTGGGGATGGCGAGGGGGTCGAGTGTCCTGGGAGGTG
TCAGTGTGTTGGGGGTTTTGGGACTCTTGGGAATTTATTGGTTCGGGGAG
AGACTGAGGAAGAAGTCGAGGTTTGTGGAGAGGTTGGTTGAGTAGATGTC
GCCGGATCTACCTTGCATTGTCTTTGCGAGGTCCTTTTTCCATAGGCACG
ATAGAGATGATAACGCAGAGCGCCATGCTAGACATGAGACACCTAAGCAG
ATCGACGAGCATGCTCACCGGCGAAAGCACTCGTCAGACTCAGAAAAGAC
ACTTACAGTCGAGGACTGGGCAACAAGTCGCGAGAACCCACACAACTGGC
CGCTAGCAAAGACAATCATCACATCCCTCATAGTATACGTCTACACTTTC
GTGGTGTATGCTGGGTCATCCATGTTCATTACGGCAGTCCCGTTGGTCAT
GCAGGAGCTGCACATCTCCGAGCAACGCGCCATGTTAGGGCTGTCCATCT
ACGTGCTTGGGTACGGCGTCGGACCCCTCCTCTGGGGCCCGCTCAGCGAG
ATCCCTCGCATCGGACGATCAGTCGTCTACGTCGGAACATTCATAGCATT
CATCCTCGTCACGATCGGAGCCGCCGAAGTATCGAACTACAGCGCATTCG
TCTTCCTCCGCTTCTTGCAGGGGCTCTTCGGCAGCCCGTGCCTCGCCAAC
GGTGGCGCCTCCATGCATGACCTTTACCCCGAATCCCAGTTCCCCTACGC
CCTCGCTCTATGGGTAGCTGCAGCGTACTGCGGCCCGGCTCTCGGGCCCC
TGCTCACCAACAGCCTGGTCAACAACATCTCCTGGAAATGGACCATGTGG
CTCCTCGCCTGTATGTCCGGCCCGGTATGCATCCTGCTGTTTCTCCTCCC
TGAAACTTACGCCCCGACCATACGATACCGCAGCAGTGCATTCAATACCA
ACAGCAGCAACGACAATAACAGCGATAGTACAAGTGACAACCCCCTTGCC
AAACTAAAATTCTACCTCGTCAAACCAGTCCAAATCACCCTCCAAGATCC
TGCCATCCTCTTCGCCAACATCTACACCTCCTTTATTACGGCACGTATTA
TACCTTCTTCGACGCCTTTCCCATCGGTCCTAGTAGGGTGCTTCCTCGCA
GTATTCGCCTACTTCACTTATCTCTCCCTCCCTAACTACCTCCGCAAACA
CCATCTCCATCACAACACCCCCAAATCCACCTCAATCCCTCACCCAACCC
ACGAACGACACCTCATCCCCGCCATCCCGGCTACCTTCCTCGTCCCCATC
TCCCTCTTCCTCTACGGCTGGACCCTCCGCCCCTCCATCCACTGGATCGT
CAGCATCATCGGCGTGACATTGTACGCCAGCGCGGTGTTTATCATTTTAC
AATGTCTCTCCATGTATATACCTAGTATATATCCCGAGTACGCGGCGAGT
CTGTTCGCCGCGAATGACTTCTGTCGGAGTACGTTGGCTGCTGGCGCGGT
GCATTTTGGGATCCCCCTATATCAGAATCTGGGGATGGCGAGGGGGTCGA
GTGTCCTGGGAGGTGTCAGTGTGTTGGGGGTTTTGGGACTCTTGGGAATT
TATTGGTTCGGGGAGAGACTGAGGAAGAAGTCGAGGTTTGTGGAGAGGTT
GGTTGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006666ATCC10864_006666Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006666-T1.exon1ATCC10864_006666-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006666-T1.exon2ATCC10864_006666-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006666-T1.exon3ATCC10864_006666-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006666-T1.exon4ATCC10864_006666-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006666-T1.cdsATCC10864_006666-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006666-T1ATCC10864_006666-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
NoteantiSMASH:Cluster_1000169.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:324783..326459 +
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