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ATCC10864_006676-T1, ATCC10864_006676-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006676-T1
Unique NameATCC10864_006676-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:359597..360168+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006676-T1 ID=ATCC10864_006676-T1|Name=ATCC10864_006676-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=572bp|location=Sequence derived from alignment at MCQH01000169:359597..360168+ (Aspergillus niger ATCC 10864)
ATGGCCAATAATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGC AACGGGTATGTTAAGCCTTTCTCCAAGAGGTCCGAGGCCAGTATCATGAC CATAACATTGATAGGGGGACGGACGGAGGGAATGGTTCGCAAGGGAGCTA TCATCGACAAGTCGGATCAGTTGTGCGCACTAGGTTGGTTGAGACCCTTT GCCAGGAGTTGAATGTTTCTAATACAACGTCTGCCAGTCATGTGCGCCGA GCCACATTCCTGCTCAGCTGTCCACCATCACGGCGAGCAGGATACCGTGG TTTACGCCGCAAAGGGCCACGGTTCCATTGTCTTCGATGGGGGAAAGCAG CGCAAAGACCTCTCCCCGGGTGACTTTGCTATCATTCCTGCGTAAGTAGT AAGGCACTAACTAATATAAGTACGTGAACTGACTCGGAGCCTACATGTGT GCAGCTACACGGAACACCAGGAGATGAACCAATCAGATAAAGATGTTGAA TGGGTGATCACCAGAGCAGGACGCAAGCCCATCACAGTCAACCTGGAAGG TTGGTCTAAAACTTCTAGCTGA
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Coding sequence (CDS) from alignment at MCQH01000169:359597..360168+

>ATCC10864_006676-T1 ID=ATCC10864_006676-T1|Name=ATCC10864_006676-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1584bp|location=Sequence derived from alignment at MCQH01000169:359597..360168+ (Aspergillus niger ATCC 10864)
ATGGCCAATAATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGC
AACGGGGGGACGGACGGAGGGAATGGTTCGCAAGGGAGCTATCATCGACA
AGTCGGATCAGTTGTGCGCACTAGTCATGTGCGCCGAGCCACATTCCTGC
TCAGCTGTCCACCATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAA
GGGCCACGGTTCCATTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCT
CCCCGGGTGACTTTGCTATCATTCCTGCCTACACGGAACACCAGGAGATG
AACCAATCAGATAAAGATGTTGAATGGGTGATCACCAGAGCAGGACGCAA
GCCCATCACAGTCAACCTGGAAGGTTGGTCTAAAACTTCTAGCTGAATGG
CCAATAATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACG
GGGGGACGGACGGAGGGAATGGTTCGCAAGGGAGCTATCATCGACAAGTC
GGATCAGTTGTGCGCACTAGTCATGTGCGCCGAGCCACATTCCTGCTCAG
CTGTCCACCATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGC
CACGGTTCCATTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCC
GGGTGACTTTGCTATCATTCCTGCCTACACGGAACACCAGGAGATGAACC
AATCAGATAAAGATGTTGAATGGGTGATCACCAGAGCAGGACGCAAGCCC
ATCACAGTCAACCTGGAAGGTTGGTCTAAAACTTCTAGCTGAATGGCCAA
TAATAAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGGGG
GACGGACGGAGGGAATGGTTCGCAAGGGAGCTATCATCGACAAGTCGGAT
CAGTTGTGCGCACTAGTCATGTGCGCCGAGCCACATTCCTGCTCAGCTGT
CCACCATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACG
GTTCCATTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGT
GACTTTGCTATCATTCCTGCCTACACGGAACACCAGGAGATGAACCAATC
AGATAAAGATGTTGAATGGGTGATCACCAGAGCAGGACGCAAGCCCATCA
CAGTCAACCTGGAAGGTTGGTCTAAAACTTCTAGCTGAATGGCCAATAAT
AAGGTTGACGTCACTAGATCCTCGGACTTGGACGAGGCAACGGGGGGACG
GACGGAGGGAATGGTTCGCAAGGGAGCTATCATCGACAAGTCGGATCAGT
TGTGCGCACTAGTCATGTGCGCCGAGCCACATTCCTGCTCAGCTGTCCAC
CATCACGGCGAGCAGGATACCGTGGTTTACGCCGCAAAGGGCCACGGTTC
CATTGTCTTCGATGGGGGAAAGCAGCGCAAAGACCTCTCCCCGGGTGACT
TTGCTATCATTCCTGCCTACACGGAACACCAGGAGATGAACCAATCAGAT
AAAGATGTTGAATGGGTGATCACCAGAGCAGGACGCAAGCCCATCACAGT
CAACCTGGAAGGTTGGTCTAAAACTTCTAGCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006676ATCC10864_006676Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006676-T1.exon1ATCC10864_006676-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006676-T1.exon2ATCC10864_006676-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006676-T1.exon3ATCC10864_006676-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006676-T1.exon4ATCC10864_006676-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006676-T1.cdsATCC10864_006676-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006676-T1ATCC10864_006676-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR014710
PFAMPF07883
PFAMPF00190
InterProIPR013096
InterProIPR011051
Properties
Property NameValue
NoteantiSMASH:Cluster_1000169.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:359597..360168 +