You are here

Home

ATCC10864_006697-T1, ATCC10864_006697-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006697-T1
Unique NameATCC10864_006697-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:412685..413690+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006697-T1 ID=ATCC10864_006697-T1|Name=ATCC10864_006697-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1006bp|location=Sequence derived from alignment at MCQH01000169:412685..413690+ (Aspergillus niger ATCC 10864)
ATGTTCGCCCCAACCACTCTCCTCCCCCTTCTCGCTTCCTCAGCGCTGGC
GCTGCCCGCCCTCACCACCCGCGCTCAAACCCAATCCTCCACCTCCCTCT
GCGGTGACTACGACTACATCATCCTCCAGGACTCGCCATGGATCGTGTAC
AACATGCTCTACAATGCCGACGAGATCGTCGGTACCCAGTGTACCGACTA
CGGCGAGATGACTACCTCCACGAATGGCACGAAGGAGGTCGTTTGGAGTA
GTGTGACTGATATTGAATATGTGGAGAGCACGTAGGCCACCTTCCCCTCC
TTTCCTTATCCCATACTGCTAAATGTATCACTAACGATGGTTATAGGAAC
AATGTCCCTAAGGGATACTCCTTCGTCGGACTGACCCAGAACCTCGAGAC
CAAGATCTCGGCTATTGAGTCCATTCCAGCTGAATATACCTGGTCGAGGA
CGAATACTACCGCCTTCAAGGGTACATACCCCTCCCTCTCTCCCAACTCT
TAAGATTGATTCCGGCACTAATGATTGGAATGCTATAGGCAACGTCTGCT
TCGACTTCATCACCTCCCCCACCAAGGGCGACTCGACCTCCACCTCCGCC
CACGAACTCATGCTCTGGCTACAATACGAAGGCGGCCAGCTCCCTATCGG
CTGGACTAACGGGGCTGTTGCCACCATCGATAACCTCTTCGGCACGTCCT
GGAAGCTGTACGAGGATGTGAACGAGGATTCGGGTGTCACTGTTAGCTCG
TTGTTGCCGGATACCCAGTTCGAGGGTTCCTTCGAGGGTGATCTCAAGGA
ATGGTTGTTGGAGTTGGTCCAGTTGGGCAAGTTTACTAAGGAGGCGTATG
TGAATGTTGGGAACGGAGGGTGAGTTTTTATTTCTTCTTACTTTGTCGGA
GATTGGGTGAAGAGACGCTAACAGGGGGGTGTGAATTAGTACCGAGTTTT
TCTACGGTAACTCGGTTATGAATGCTACCCTGGGGTTGCAGATTAACTTG
GATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000169:412685..413690+

>ATCC10864_006697-T1 ID=ATCC10864_006697-T1|Name=ATCC10864_006697-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3216bp|location=Sequence derived from alignment at MCQH01000169:412685..413690+ (Aspergillus niger ATCC 10864)
ATGTTCGCCCCAACCACTCTCCTCCCCCTTCTCGCTTCCTCAGCGCTGGC
GCTGCCCGCCCTCACCACCCGCGCTCAAACCCAATCCTCCACCTCCCTCT
GCGGTGACTACGACTACATCATCCTCCAGGACTCGCCATGGATCGTGTAC
AACATGCTCTACAATGCCGACGAGATCGTCGGTACCCAGTGTACCGACTA
CGGCGAGATGACTACCTCCACGAATGGCACGAAGGAGGTCGTTTGGAGTA
GTGTGACTGATATTGAATATGTGGAGAGCACGAACAATGTCCCTAAGGGA
TACTCCTTCGTCGGACTGACCCAGAACCTCGAGACCAAGATCTCGGCTAT
TGAGTCCATTCCAGCTGAATATACCTGGTCGAGGACGAATACTACCGCCT
TCAAGGGCAACGTCTGCTTCGACTTCATCACCTCCCCCACCAAGGGCGAC
TCGACCTCCACCTCCGCCCACGAACTCATGCTCTGGCTACAATACGAAGG
CGGCCAGCTCCCTATCGGCTGGACTAACGGGGCTGTTGCCACCATCGATA
ACCTCTTCGGCACGTCCTGGAAGCTGTACGAGGATGTGAACGAGGATTCG
GGTGTCACTGTTAGCTCGTTGTTGCCGGATACCCAGTTCGAGGGTTCCTT
CGAGGGTGATCTCAAGGAATGGTTGTTGGAGTTGGTCCAGTTGGGCAAGT
TTACTAAGGAGGCGTATGTGAATGTTGGGAACGGAGGTACCGAGTTTTTC
TACGGTAACTCGGTTATGAATGCTACCCTGGGGTTGCAGATTAACTTGGA
TTAGATGTTCGCCCCAACCACTCTCCTCCCCCTTCTCGCTTCCTCAGCGC
TGGCGCTGCCCGCCCTCACCACCCGCGCTCAAACCCAATCCTCCACCTCC
CTCTGCGGTGACTACGACTACATCATCCTCCAGGACTCGCCATGGATCGT
GTACAACATGCTCTACAATGCCGACGAGATCGTCGGTACCCAGTGTACCG
ACTACGGCGAGATGACTACCTCCACGAATGGCACGAAGGAGGTCGTTTGG
AGTAGTGTGACTGATATTGAATATGTGGAGAGCACGAACAATGTCCCTAA
GGGATACTCCTTCGTCGGACTGACCCAGAACCTCGAGACCAAGATCTCGG
CTATTGAGTCCATTCCAGCTGAATATACCTGGTCGAGGACGAATACTACC
GCCTTCAAGGGCAACGTCTGCTTCGACTTCATCACCTCCCCCACCAAGGG
CGACTCGACCTCCACCTCCGCCCACGAACTCATGCTCTGGCTACAATACG
AAGGCGGCCAGCTCCCTATCGGCTGGACTAACGGGGCTGTTGCCACCATC
GATAACCTCTTCGGCACGTCCTGGAAGCTGTACGAGGATGTGAACGAGGA
TTCGGGTGTCACTGTTAGCTCGTTGTTGCCGGATACCCAGTTCGAGGGTT
CCTTCGAGGGTGATCTCAAGGAATGGTTGTTGGAGTTGGTCCAGTTGGGC
AAGTTTACTAAGGAGGCGTATGTGAATGTTGGGAACGGAGGTACCGAGTT
TTTCTACGGTAACTCGGTTATGAATGCTACCCTGGGGTTGCAGATTAACT
TGGATTAGATGTTCGCCCCAACCACTCTCCTCCCCCTTCTCGCTTCCTCA
GCGCTGGCGCTGCCCGCCCTCACCACCCGCGCTCAAACCCAATCCTCCAC
CTCCCTCTGCGGTGACTACGACTACATCATCCTCCAGGACTCGCCATGGA
TCGTGTACAACATGCTCTACAATGCCGACGAGATCGTCGGTACCCAGTGT
ACCGACTACGGCGAGATGACTACCTCCACGAATGGCACGAAGGAGGTCGT
TTGGAGTAGTGTGACTGATATTGAATATGTGGAGAGCACGAACAATGTCC
CTAAGGGATACTCCTTCGTCGGACTGACCCAGAACCTCGAGACCAAGATC
TCGGCTATTGAGTCCATTCCAGCTGAATATACCTGGTCGAGGACGAATAC
TACCGCCTTCAAGGGCAACGTCTGCTTCGACTTCATCACCTCCCCCACCA
AGGGCGACTCGACCTCCACCTCCGCCCACGAACTCATGCTCTGGCTACAA
TACGAAGGCGGCCAGCTCCCTATCGGCTGGACTAACGGGGCTGTTGCCAC
CATCGATAACCTCTTCGGCACGTCCTGGAAGCTGTACGAGGATGTGAACG
AGGATTCGGGTGTCACTGTTAGCTCGTTGTTGCCGGATACCCAGTTCGAG
GGTTCCTTCGAGGGTGATCTCAAGGAATGGTTGTTGGAGTTGGTCCAGTT
GGGCAAGTTTACTAAGGAGGCGTATGTGAATGTTGGGAACGGAGGTACCG
AGTTTTTCTACGGTAACTCGGTTATGAATGCTACCCTGGGGTTGCAGATT
AACTTGGATTAGATGTTCGCCCCAACCACTCTCCTCCCCCTTCTCGCTTC
CTCAGCGCTGGCGCTGCCCGCCCTCACCACCCGCGCTCAAACCCAATCCT
CCACCTCCCTCTGCGGTGACTACGACTACATCATCCTCCAGGACTCGCCA
TGGATCGTGTACAACATGCTCTACAATGCCGACGAGATCGTCGGTACCCA
GTGTACCGACTACGGCGAGATGACTACCTCCACGAATGGCACGAAGGAGG
TCGTTTGGAGTAGTGTGACTGATATTGAATATGTGGAGAGCACGAACAAT
GTCCCTAAGGGATACTCCTTCGTCGGACTGACCCAGAACCTCGAGACCAA
GATCTCGGCTATTGAGTCCATTCCAGCTGAATATACCTGGTCGAGGACGA
ATACTACCGCCTTCAAGGGCAACGTCTGCTTCGACTTCATCACCTCCCCC
ACCAAGGGCGACTCGACCTCCACCTCCGCCCACGAACTCATGCTCTGGCT
ACAATACGAAGGCGGCCAGCTCCCTATCGGCTGGACTAACGGGGCTGTTG
CCACCATCGATAACCTCTTCGGCACGTCCTGGAAGCTGTACGAGGATGTG
AACGAGGATTCGGGTGTCACTGTTAGCTCGTTGTTGCCGGATACCCAGTT
CGAGGGTTCCTTCGAGGGTGATCTCAAGGAATGGTTGTTGGAGTTGGTCC
AGTTGGGCAAGTTTACTAAGGAGGCGTATGTGAATGTTGGGAACGGAGGT
ACCGAGTTTTTCTACGGTAACTCGGTTATGAATGCTACCCTGGGGTTGCA
GATTAACTTGGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008810cellulase activity
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006697ATCC10864_006697Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006697-T1.exon1ATCC10864_006697-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006697-T1.exon2ATCC10864_006697-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006697-T1.exon3ATCC10864_006697-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006697-T1.exon4ATCC10864_006697-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006697-T1.cdsATCC10864_006697-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006697-T1ATCC10864_006697-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002594
InterProIPR013320
PFAMPF01670
InterProIPR013319
Properties
Property NameValue
NoteCAZy:GH12
NoteantiSMASH:Cluster_1000169.4
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:412685..413690 +
Powered by Drupal