You are here

Home

ATCC10864_006704-T1, ATCC10864_006704-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006704-T1
Unique NameATCC10864_006704-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:432659..434122-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006704-T1 ID=ATCC10864_006704-T1|Name=ATCC10864_006704-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1464bp|location=Sequence derived from alignment at MCQH01000169:432659..434122- (Aspergillus niger ATCC 10864)
ATGCTCTCCAAGATGCAGCTCGCCCAGCTGGCCGCCTTCGCCATGACCCT
GGCCACCTCCGAGGCCGCCTACCAGGGTTTCAACTACGGCAACAAGTTCT
CCGATGAGAGCTCCAAGTTCCAGGCCGACTTCGAGGCCGAGTTCAAGGCC
GCCAAGAACCTCGTCGGCACCTCCGGCTTCACCTCCGCCCGTCTCTACAC
CATGATCGTACGTTTTACCCCCAATCAAAAAGATGGATCATCACAATGAT
GGTGCAAGTTACTCACTCGCCGATAGCAAGCCTACTCCACCAGCGATGTC
ATCGAGGCCATCCCCGCCGCCATTGCCCAGGATACTTCCCTTTTGCTCGG
TCTCTGGGCCTCCGGTGGTGGCATGGACAACGAGATCACCGCCCTGAAGA
CCGCCATCTCTCAGTACGGTGAGGAGCTCGGCAAGCTCGTCGTCGGTATC
TCCGTCGGCAGTGAGGATCTCTACCGCAACTCCGTCGAGGGTGCCGAGGC
CGATGCCGGTGTTGGTGTCAACCCCGACGAGCTCGTCGAGTACATCAAGG
AGGTCCGCTCCGTCATCGCCGGCACCGCCCTCGCCGACGTCTCCATCGGT
CACGTCGACACCTGGGACTCCTGGACCAACAGCTCCAACTCGGCCGTCGT
CGAGGCCGTCGACTGGCTGGGCTTTGACGGCTACCCCTTCTTCCAGAGCT
CCATGGCCAACTCCATCGACAACGCCAAGACCCTCTTCGAGGAGTCGGTC
GCCAAGACCAAGGCGGTTGCCGGTGACAAGGAGGTCTGGATCACTGAGAC
TGGTTGGCCCGTCAGCGGTGACTCCCAAGGTGACGCCGTCGCCTCCATCG
CCAATGCTAAGACTTTCTGGGATGAGGTTGGCTGCCCTCTCTTCGGCAAC
GTGAACACCTGGTGGTACATCCTGCAGGATGCCTCCCCCACCACCCCCAA
CCCCAGCTTCGGTATCGTCGGCAGCACTCTCTCCACCACTCCCCTGTTCG
ACCTGTCCTGCAAGAACTCCACCACCTCCTCCTCGTCCGCCGTTGTTTCT
GCCGCTGCTTCTTCCGCCGCCGGTAGCAAGGCCGTTGGTTCTTCCCAGGC
CTCTTCTGGTGCCGCTGCCTGGGCCACCTCCGCCTCCGGCTCTGCTAAGC
CCACCTTCACCGTTGGCCGCCCCGGTGTGAACGGCACTGTCTTCGGTAAC
GGCACCTACCCCCTCCGCCCCAGCGGTTCCGCCTCTGCTCGTCCCTCCGC
CGGTGCCATCTCCAGCGGCTCGGGCTCCAGCTCCAGCGGTTCGGGCAGCT
CTGGTAGCACCGGCACCTCGGCCACCTCCGGCCAGTCCTCCTCTTCCGGC
AGCTCTGCGGCCGCTGGCTCTTCCTCCCCCGCTGCCTTCAGCGGTGCCAG
CACCCTCTCCGGCTCCCTCTTCGGTGCCGTGGTGGCCGTCTTCATGACCC
TGGCTGCTTTGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000169:432659..434122-

>ATCC10864_006704-T1 ID=ATCC10864_006704-T1|Name=ATCC10864_006704-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2790bp|location=Sequence derived from alignment at MCQH01000169:432659..434122- (Aspergillus niger ATCC 10864)
CAAGCCTACTCCACCAGCGATGTCATCGAGGCCATCCCCGCCGCCATTGC
CCAGGATACTTCCCTTTTGCTCGGTCTCTGGGCCTCCGGTGGTGGCATGG
ACAACGAGATCACCGCCCTGAAGACCGCCATCTCTCAGTACGGTGAGGAG
CTCGGCAAGCTCGTCGTCGGTATCTCCGTCGGCAGTGAGGATCTCTACCG
CAACTCCGTCGAGGGTGCCGAGGCCGATGCCGGTGTTGGTGTCAACCCCG
ACGAGCTCGTCGAGTACATCAAGGAGGTCCGCTCCGTCATCGCCGGCACC
GCCCTCGCCGACGTCTCCATCGGTCACGTCGACACCTGGGACTCCTGGAC
CAACAGCTCCAACTCGGCCGTCGTCGAGGCCGTCGACTGGCTGGGCTTTG
ACGGCTACCCCTTCTTCCAGAGCTCCATGGCCAACTCCATCGACAACGCC
AAGACCCTCTTCGAGGAGTCGGTCGCCAAGACCAAGGCGGTTGCCGGTGA
CAAGGAGGTCTGGATCACTGAGACTGGTTGGCCCGTCAGCGGTGACTCCC
AAGGTGACGCCGTCGCCTCCATCGCCAATGCTAAGACTTTCTGGGATGAG
GTTGGCTGCCCTCTCTTCGGCAACGTGAACACCTGGTGGTACATCCTGCA
GGATGCCTCCCCCACCACCCCCAACCCCAGCTTCGGTATCGTCGGCAGCA
CTCTCTCCACCACTCCCCTGTTCGACCTGTCCTGCAAGAACTCCACCACC
TCCTCCTCGTCCGCCGTTGTTTCTGCCGCTGCTTCTTCCGCCGCCGGTAG
CAAGGCCGTTGGTTCTTCCCAGGCCTCTTCTGGTGCCGCTGCCTGGGCCA
CCTCCGCCTCCGGCTCTGCTAAGCCCACCTTCACCGTTGGCCGCCCCGGT
GTGAACGGCACTGTCTTCGGTAACGGCACCTACCCCCTCCGCCCCAGCGG
TTCCGCCTCTGCTCGTCCCTCCGCCGGTGCCATCTCCAGCGGCTCGGGCT
CCAGCTCCAGCGGTTCGGGCAGCTCTGGTAGCACCGGCACCTCGGCCACC
TCCGGCCAGTCCTCCTCTTCCGGCAGCTCTGCGGCCGCTGGCTCTTCCTC
CCCCGCTGCCTTCAGCGGTGCCAGCACCCTCTCCGGCTCCCTCTTCGGTG
CCGTGGTGGCCGTCTTCATGACCCTGGCTGCTTTGTAAATGCTCTCCAAG
ATGCAGCTCGCCCAGCTGGCCGCCTTCGCCATGACCCTGGCCACCTCCGA
GGCCGCCTACCAGGGTTTCAACTACGGCAACAAGTTCTCCGATGAGAGCT
CCAAGTTCCAGGCCGACTTCGAGGCCGAGTTCAAGGCCGCCAAGAACCTC
GTCGGCACCTCCGGCTTCACCTCCGCCCGTCTCTACACCATGATCCAAGC
CTACTCCACCAGCGATGTCATCGAGGCCATCCCCGCCGCCATTGCCCAGG
ATACTTCCCTTTTGCTCGGTCTCTGGGCCTCCGGTGGTGGCATGGACAAC
GAGATCACCGCCCTGAAGACCGCCATCTCTCAGTACGGTGAGGAGCTCGG
CAAGCTCGTCGTCGGTATCTCCGTCGGCAGTGAGGATCTCTACCGCAACT
CCGTCGAGGGTGCCGAGGCCGATGCCGGTGTTGGTGTCAACCCCGACGAG
CTCGTCGAGTACATCAAGGAGGTCCGCTCCGTCATCGCCGGCACCGCCCT
CGCCGACGTCTCCATCGGTCACGTCGACACCTGGGACTCCTGGACCAACA
GCTCCAACTCGGCCGTCGTCGAGGCCGTCGACTGGCTGGGCTTTGACGGC
TACCCCTTCTTCCAGAGCTCCATGGCCAACTCCATCGACAACGCCAAGAC
CCTCTTCGAGGAGTCGGTCGCCAAGACCAAGGCGGTTGCCGGTGACAAGG
AGGTCTGGATCACTGAGACTGGTTGGCCCGTCAGCGGTGACTCCCAAGGT
GACGCCGTCGCCTCCATCGCCAATGCTAAGACTTTCTGGGATGAGGTTGG
CTGCCCTCTCTTCGGCAACGTGAACACCTGGTGGTACATCCTGCAGGATG
CCTCCCCCACCACCCCCAACCCCAGCTTCGGTATCGTCGGCAGCACTCTC
TCCACCACTCCCCTGTTCGACCTGTCCTGCAAGAACTCCACCACCTCCTC
CTCGTCCGCCGTTGTTTCTGCCGCTGCTTCTTCCGCCGCCGGTAGCAAGG
CCGTTGGTTCTTCCCAGGCCTCTTCTGGTGCCGCTGCCTGGGCCACCTCC
GCCTCCGGCTCTGCTAAGCCCACCTTCACCGTTGGCCGCCCCGGTGTGAA
CGGCACTGTCTTCGGTAACGGCACCTACCCCCTCCGCCCCAGCGGTTCCG
CCTCTGCTCGTCCCTCCGCCGGTGCCATCTCCAGCGGCTCGGGCTCCAGC
TCCAGCGGTTCGGGCAGCTCTGGTAGCACCGGCACCTCGGCCACCTCCGG
CCAGTCCTCCTCTTCCGGCAGCTCTGCGGCCGCTGGCTCTTCCTCCCCCG
CTGCCTTCAGCGGTGCCAGCACCCTCTCCGGCTCCCTCTTCGGTGCCGTG
GTGGCCGTCTTCATGACCCTGGCTGCTTTGTAAATGCTCTCCAAGATGCA
GCTCGCCCAGCTGGCCGCCTTCGCCATGACCCTGGCCACCTCCGAGGCCG
CCTACCAGGGTTTCAACTACGGCAACAAGTTCTCCGATGAGAGCTCCAAG
TTCCAGGCCGACTTCGAGGCCGAGTTCAAGGCCGCCAAGAACCTCGTCGG
CACCTCCGGCTTCACCTCCGCCCGTCTCTACACCATGATC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006704ATCC10864_006704Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006704-T1ATCC10864_006704-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006704-T1.cdsATCC10864_006704-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006704-T1.exon2ATCC10864_006704-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006704-T1.exon1ATCC10864_006704-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR017853
PFAMPF00332
InterProIPR000490
Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:432659..434122 -
Powered by Drupal