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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000169:615821..616347- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_006762-T1 ID=ATCC10864_006762-T1|Name=ATCC10864_006762-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=527bp|location=Sequence derived from alignment at MCQH01000169:615821..616347- (Aspergillus niger ATCC 10864)
ATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCGGCACCAGCCGTT
CTACAACATTGTTGTAGCCCAGGCACGGTAGGTAAATTTTTTATGGATAC
CGGGAATCAGTATATCGCGTTCCGCGAGCGACTCATTTGGAGGTTTTCTA
AGGGCAATATGTGATCTAATGCTAATGGAGATATATCCTATAGGTCGGCC
CGCGACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCTATCCCGCA
GCGCCCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAAAGCATACA
AGGAGATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTGGTGTTGGT
GCGCAGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCGTACGTTGCCT
GCCACTGCACACAAGCATGTCCGCCAGTAGGAAGGGTTATGGACCTGGGT
AACGACAGTGATTGACTAATATTCGGTATTTACTACAGGCCGGGATTGTG
AAAGAAAGCAAAAATGTGCAAAACTGA back to topCoding sequence (CDS) from alignment at MCQH01000169:615821..616347- >ATCC10864_006762-T1 ID=ATCC10864_006762-T1|Name=ATCC10864_006762-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=936bp|location=Sequence derived from alignment at MCQH01000169:615821..616347- (Aspergillus niger ATCC 10864)
GCCGGGATTGTGAAAGAAAGCAAAAATGTGCAAAACTGAGTCGGCCCGCG
ACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCTATCCCGCAGCGC
CCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAAAGCATACAAGGA
GATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTGGTGTTGGTGCGC
AGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCATGGTTGTTCGCATT
CGCCTCTCCCGCTTTGGAAACCGGCACCAGCCGTTCTACAACATTGTTGT
AGCCCAGGCACGGCCGGGATTGTGAAAGAAAGCAAAAATGTGCAAAACTG
AGTCGGCCCGCGACTCAAAACCTCTTGAAGTCATCGGTACTTTCAACCCT
ATCCCGCAGCGCCCTACGAACTTGTCCGAGCAGGAGGCCCGCACCGCCAA
AGCATACAAGGAGATTTCGCTCGATCGATCTCGAGCCAAGTACTGGATTG
GTGTTGGTGCGCAGCCCAGTGATAGTGTTTGGAAGTTACTAAGCCTCATG
GTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCGGCACCAGCCGTTCTA
CAACATTGTTGTAGCCCAGGCACGGCCGGGATTGTGAAAGAAAGCAAAAA
TGTGCAAAACTGAGTCGGCCCGCGACTCAAAACCTCTTGAAGTCATCGGT
ACTTTCAACCCTATCCCGCAGCGCCCTACGAACTTGTCCGAGCAGGAGGC
CCGCACCGCCAAAGCATACAAGGAGATTTCGCTCGATCGATCTCGAGCCA
AGTACTGGATTGGTGTTGGTGCGCAGCCCAGTGATAGTGTTTGGAAGTTA
CTAAGCCTCATGGTTGTTCGCATTCGCCTCTCCCGCTTTGGAAACCGGCA
CCAGCCGTTCTACAACATTGTTGTAGCCCAGGCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00886 |
| InterPro | IPR023803 |
| InterPro | IPR000307 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092652YI |
| Product | mitochondrial |
| Product | Ribosomal protein S16 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000169 | supercontig | MCQH01000169:615821..616347 - |
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