You are here

Home

ATCC10864_006767-T1, ATCC10864_006767-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006767-T1
Unique NameATCC10864_006767-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:630113..631046+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006767-T1 ID=ATCC10864_006767-T1|Name=ATCC10864_006767-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=934bp|location=Sequence derived from alignment at MCQH01000169:630113..631046+ (Aspergillus niger ATCC 10864)
ATGCCGGCCAACTACTCCTTTGCAGACGTGGTACCACTGCCTAATTCCGC
CGTCAAAATACCCCGCCTCGGCTTCGGCGTCTATCGGTCGCCTTCCGCAC
AATGCGTGCAGTCCTGCCTCAAGGCCCTTGAAGTTGGCTACCGGCACATT
GATACCGCCCAGTTCTACGCAAATGAGAAAGAAGTTGGCGACGCCATCCG
TTCCTCTGGCCTGCCCCGCAGTGAAATTTTCGTGACCACCAAAATCCTCA
GCCCAGCGGGCTCGCCTGAGGCAACCTATGAGAGACTGCTGGCTAGCGTC
GAGAAGATCGGTGGCCCGGATGGATACGTTGATCTGTTTTTAATCCATAG
CTCCAAGTCCGGCTCGTCGGGTCGCAAGCACTTATGGCAGGCCCTGGAAA
GGCTGCTGGAGGAGGGCAAAGCTAAGAGCATTGGTGTCAGCAACTTTGGG
GCGAAGCACATTGAAGAGATGAAAGAGTATGCGAAAGTCTGGCCGCCTCA
TGTTAATCAGATCGAGGTTAGTTCCCCACGCTTTTGTTCAGTTTGGTCCG
TACGGTGCAACAGGAAAGGGAATCTGGCTGACTCATAGATTCGCATAGCT
TCACCCTTGGTGCCAGCAACGCGTGATCGATGCATACTGCAAGAAGAACG
GAATCGTTGTCGAGTCGTATGCCCCCATTGTGCGGAACTATAAAGCAAAT
GACCCTACCCTCGTGGACTTTGCAAAGAAATACAACAAGACGACCCAGCA
GGTCCTGATACGCTACGCGCTGCAGAAGGAATGGGTTCCACTTCCTAAAA
CCGACAATCCAGACCGGATTGCGGCTAACGCTGATGTATTTGATTTCGAC
ATCAGCGAGGAGGACATGGCGGTGCTTAATGCTCTTGACCAGGGAAGCAG
TGGCGCCATTGTCGAGGCTGTCGAGAACGAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000169:630113..631046+

>ATCC10864_006767-T1 ID=ATCC10864_006767-T1|Name=ATCC10864_006767-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1704bp|location=Sequence derived from alignment at MCQH01000169:630113..631046+ (Aspergillus niger ATCC 10864)
ATGCCGGCCAACTACTCCTTTGCAGACGTGGTACCACTGCCTAATTCCGC
CGTCAAAATACCCCGCCTCGGCTTCGGCGTCTATCGGTCGCCTTCCGCAC
AATGCGTGCAGTCCTGCCTCAAGGCCCTTGAAGTTGGCTACCGGCACATT
GATACCGCCCAGTTCTACGCAAATGAGAAAGAAGTTGGCGACGCCATCCG
TTCCTCTGGCCTGCCCCGCAGTGAAATTTTCGTGACCACCAAAATCCTCA
GCCCAGCGGGCTCGCCTGAGGCAACCTATGAGAGACTGCTGGCTAGCGTC
GAGAAGATCGGTGGCCCGGATGGATACGTTGATCTGTTTTTAATCCATAG
CTCCAAGTCCGGCTCGTCGGGTCGCAAGCACTTATGGCAGGCCCTGGAAA
GGCTGCTGGAGGAGGGCAAAGCTAAGAGCATTGGTGTCAGCAACTTTGGG
GCGAAGCACATTGAAGAGATGAAAGAGTATGCGAAAGTCTGGCCGCCTCA
TGTTAATCAGATCGAGCTTCACCCTTGGTGCCAGCAACGCGTGATCGATG
CATACTGCAAGAAGAACGGAATCGTTGTCGAGTCGTATGCCCCCATTGTG
CGGAACTATAAAGCAAATGACCCTACCCTCGTGGACTTTGCAAAGAAATA
CAACAAGACGACCCAGCAGGTCCTGATACGCTACGCGCTGCAGAAGGAAT
GGGTTCCACTTCCTAAAACCGACAATCCAGACCGGATTGCGGCTAACGCT
GATGTATTTGATTTCGACATCAGCGAGGAGGACATGGCGGTGCTTAATGC
TCTTGACCAGGGAAGCAGTGGCGCCATTGTCGAGGCTGTCGAGAACGAGT
AAATGCCGGCCAACTACTCCTTTGCAGACGTGGTACCACTGCCTAATTCC
GCCGTCAAAATACCCCGCCTCGGCTTCGGCGTCTATCGGTCGCCTTCCGC
ACAATGCGTGCAGTCCTGCCTCAAGGCCCTTGAAGTTGGCTACCGGCACA
TTGATACCGCCCAGTTCTACGCAAATGAGAAAGAAGTTGGCGACGCCATC
CGTTCCTCTGGCCTGCCCCGCAGTGAAATTTTCGTGACCACCAAAATCCT
CAGCCCAGCGGGCTCGCCTGAGGCAACCTATGAGAGACTGCTGGCTAGCG
TCGAGAAGATCGGTGGCCCGGATGGATACGTTGATCTGTTTTTAATCCAT
AGCTCCAAGTCCGGCTCGTCGGGTCGCAAGCACTTATGGCAGGCCCTGGA
AAGGCTGCTGGAGGAGGGCAAAGCTAAGAGCATTGGTGTCAGCAACTTTG
GGGCGAAGCACATTGAAGAGATGAAAGAGTATGCGAAAGTCTGGCCGCCT
CATGTTAATCAGATCGAGCTTCACCCTTGGTGCCAGCAACGCGTGATCGA
TGCATACTGCAAGAAGAACGGAATCGTTGTCGAGTCGTATGCCCCCATTG
TGCGGAACTATAAAGCAAATGACCCTACCCTCGTGGACTTTGCAAAGAAA
TACAACAAGACGACCCAGCAGGTCCTGATACGCTACGCGCTGCAGAAGGA
ATGGGTTCCACTTCCTAAAACCGACAATCCAGACCGGATTGCGGCTAACG
CTGATGTATTTGATTTCGACATCAGCGAGGAGGACATGGCGGTGCTTAAT
GCTCTTGACCAGGGAAGCAGTGGCGCCATTGTCGAGGCTGTCGAGAACGA
GTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0047834D-threo-aldose 1-dehydrogenase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006767ATCC10864_006767Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006767-T1.exon1ATCC10864_006767-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006767-T1.exon2ATCC10864_006767-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006767-T1.cdsATCC10864_006767-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006767-T1ATCC10864_006767-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00248
InterProIPR018170
InterProIPR023210
InterProIPR036812
InterProIPR020471
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:630113..631046 +
Powered by Drupal