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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000169:636439..638351+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_006770-T1 ID=ATCC10864_006770-T1|Name=ATCC10864_006770-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1913bp|location=Sequence derived from alignment at MCQH01000169:636439..638351+ (Aspergillus niger ATCC 10864)
ATGCCTTTTCTGCGGTGGCCTCCAGGCCAGAAAATCATGATCACACCTAC
CACTCCTTTCCGAGCTGCCAGAACTCTGGCATTCGGTGGACGGATACTAT
CGCCCAAAAAGTCATCCTCGTTCGTATACCCTACAGTTGATACAAACTCC
CATGATGCTAATGGTAAATCTAAACGTGTCAATATAGTCGTCTTCTCTCC
TCAACTGCACATAGTTATGCCGACGAAACACTGAACAAAGTCTCCTCTAA
GATCACACAACCCAAGTCCCAGGGTGCATCTCAAGCGATGCTTTACGCGA
CCGGCTTGACGGAGAAAGACATGTCCAAGGCACAGGTTGGAATTTCATCA
GTGTGGTTCGAAGGGAATCCTTGTAACATGCACTTGATGGATTTGTCGTC
GCTGGTTCGCGAGTCGGTAGCCAAAGCTGGCCTGGTTCCCATGCGTTTCA
ACTCCATCGGCGCCTCTGATGGCATTAGTATGGGCACATCTGGCATGCGA
TTCAGTTTACAGAGCCGAGAGATCATTGCTGATGGAATTGAAACGGTCAT
GAATGCCCAGTGGTATGATGCTAATATCTCGTTGCCTGGCTGTGATAAGA
ACATGCCAGGTGTGCTGATGGCTATGGGTCGGGTCAACCGTCCGAGTATC
ATGGTGTATGGTGGTAGTATCAAGCCCGGCTGCAGTGCGGGGGGTAAGCC
ACTTGACTTGGTCAGCGCCTTTCAATCGTATGGCCAATATCTCACTGGTG
AGATCGACGAGAAGGAACGATTTGATATTATCCGACACGCTTGCCCAGGT
GCTGGTGCCTGTGGGGGTATGTATACGGCTAATACACTGGCAACGGCCAT
CGAGACCCTCGGAATGACGGTCCCTGGAAGCAGCAGTACACCGGCAGAGG
ATCCGAGGAAGCTGGCAGAGTGTGAGGACATCGGTCAGACGGTGAAGAAT
CTGCTGAAGGAGGACATCCGTCCCAAGGATATCATGACACGGCAGGCATT
TGAAAATGCTATGATTGTTGTGAATATTCTTGGAGGCAGCACCAATGCAG
TGCTGCACTTGATTGCTATCGCTAATTCCGTTGGGATCAAATTGACTATC
GATGACTTCCAGGCTGTGTCAGACAAGACACCTTTCTTAGCTGATCTAAA
GCCTTCCGGCAAGTATGTCATGCATGACCTGTACAAAGTCGGGGGCACGC
CTGCACTGCTGAAGTTCCTGCTCAGGGAAGGCCTTATTGACGGCTCCGGC
GTCACTGTTACTGGCAAAACCATGAAAGAGAATGTAGCCTCATGGCCCGA
ATTTTCACCTGAGCAGCCCATCATCCGCCCTCTAAGCAATCCCATCAAGC
CAACCGGCCACTTGCAGATCCTTCGTGGGTCATTGGCCCCCGGCGGCTCG
GTTGGAAAAATCACCGGCAAAGAAGGTCTACGGTTCGAAGGTCTTGCTAA
ATGTTACGACTTTGAGGACGCTTTCATTGAGGCTCTCGAACGAGGCGAGA
TCAAGAAGGGCGAGAAAACGGTCGTTATTATTCGATATGAAGGGCCCAAA
GGCGGCCCCGGGATGCCTGAGATGCTCAAGCCCAGCTCAGCTATCATGGG
CGCGGGATTGGGTCAGGATGTTGCGCTACTCACTGATGGAAGATTCTCTG
GAGGTAGTCATGGCTTTTTAATTGGGCATGTTGTGCCTGAGGCTATGGAG
GGTGGGCCCATTGCCCTGGTGAAGGATGGCGATCGGATCGTAATTGATGC
GGAGCAAAGAGTGGTTGACCTGCTGATCACCCCAGAAGAAATGGCAAAGA
GAAGAGTGTCTTGGACAGCACCGGCACCTCGGGCGAAGAAGGGGACATTA
AGCAAGTATGCGAAGCTGGTGAGCGATGCGAGCCATGGGTGCGTGACGGA
TGGTCCAATATAG back to topCoding sequence (CDS) from alignment at MCQH01000169:636439..638351+ >ATCC10864_006770-T1 ID=ATCC10864_006770-T1|Name=ATCC10864_006770-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3690bp|location=Sequence derived from alignment at MCQH01000169:636439..638351+ (Aspergillus niger ATCC 10864)
ATGCCTTTTCTGCGGTGGCCTCCAGGCCAGAAAATCATGATCACACCTAC
CACTCCTTTCCGAGCTGCCAGAACTCTGGCATTCGGTGGACGGATACTAT
CGCCCAAAAAGTCATCCTCTCGTCTTCTCTCCTCAACTGCACATAGTTAT
GCCGACGAAACACTGAACAAAGTCTCCTCTAAGATCACACAACCCAAGTC
CCAGGGTGCATCTCAAGCGATGCTTTACGCGACCGGCTTGACGGAGAAAG
ACATGTCCAAGGCACAGGTTGGAATTTCATCAGTGTGGTTCGAAGGGAAT
CCTTGTAACATGCACTTGATGGATTTGTCGTCGCTGGTTCGCGAGTCGGT
AGCCAAAGCTGGCCTGGTTCCCATGCGTTTCAACTCCATCGGCGCCTCTG
ATGGCATTAGTATGGGCACATCTGGCATGCGATTCAGTTTACAGAGCCGA
GAGATCATTGCTGATGGAATTGAAACGGTCATGAATGCCCAGTGGTATGA
TGCTAATATCTCGTTGCCTGGCTGTGATAAGAACATGCCAGGTGTGCTGA
TGGCTATGGGTCGGGTCAACCGTCCGAGTATCATGGTGTATGGTGGTAGT
ATCAAGCCCGGCTGCAGTGCGGGGGGTAAGCCACTTGACTTGGTCAGCGC
CTTTCAATCGTATGGCCAATATCTCACTGGTGAGATCGACGAGAAGGAAC
GATTTGATATTATCCGACACGCTTGCCCAGGTGCTGGTGCCTGTGGGGGT
ATGTATACGGCTAATACACTGGCAACGGCCATCGAGACCCTCGGAATGAC
GGTCCCTGGAAGCAGCAGTACACCGGCAGAGGATCCGAGGAAGCTGGCAG
AGTGTGAGGACATCGGTCAGACGGTGAAGAATCTGCTGAAGGAGGACATC
CGTCCCAAGGATATCATGACACGGCAGGCATTTGAAAATGCTATGATTGT
TGTGAATATTCTTGGAGGCAGCACCAATGCAGTGCTGCACTTGATTGCTA
TCGCTAATTCCGTTGGGATCAAATTGACTATCGATGACTTCCAGGCTGTG
TCAGACAAGACACCTTTCTTAGCTGATCTAAAGCCTTCCGGCAAGTATGT
CATGCATGACCTGTACAAAGTCGGGGGCACGCCTGCACTGCTGAAGTTCC
TGCTCAGGGAAGGCCTTATTGACGGCTCCGGCGTCACTGTTACTGGCAAA
ACCATGAAAGAGAATGTAGCCTCATGGCCCGAATTTTCACCTGAGCAGCC
CATCATCCGCCCTCTAAGCAATCCCATCAAGCCAACCGGCCACTTGCAGA
TCCTTCGTGGGTCATTGGCCCCCGGCGGCTCGGTTGGAAAAATCACCGGC
AAAGAAGGTCTACGGTTCGAAGGTCTTGCTAAATGTTACGACTTTGAGGA
CGCTTTCATTGAGGCTCTCGAACGAGGCGAGATCAAGAAGGGCGAGAAAA
CGGTCGTTATTATTCGATATGAAGGGCCCAAAGGCGGCCCCGGGATGCCT
GAGATGCTCAAGCCCAGCTCAGCTATCATGGGCGCGGGATTGGGTCAGGA
TGTTGCGCTACTCACTGATGGAAGATTCTCTGGAGGTAGTCATGGCTTTT
TAATTGGGCATGTTGTGCCTGAGGCTATGGAGGGTGGGCCCATTGCCCTG
GTGAAGGATGGCGATCGGATCGTAATTGATGCGGAGCAAAGAGTGGTTGA
CCTGCTGATCACCCCAGAAGAAATGGCAAAGAGAAGAGTGTCTTGGACAG
CACCGGCACCTCGGGCGAAGAAGGGGACATTAAGCAAGTATGCGAAGCTG
GTGAGCGATGCGAGCCATGGGTGCGTGACGGATGGTCCAATATAGATGCC
TTTTCTGCGGTGGCCTCCAGGCCAGAAAATCATGATCACACCTACCACTC
CTTTCCGAGCTGCCAGAACTCTGGCATTCGGTGGACGGATACTATCGCCC
AAAAAGTCATCCTCTCGTCTTCTCTCCTCAACTGCACATAGTTATGCCGA
CGAAACACTGAACAAAGTCTCCTCTAAGATCACACAACCCAAGTCCCAGG
GTGCATCTCAAGCGATGCTTTACGCGACCGGCTTGACGGAGAAAGACATG
TCCAAGGCACAGGTTGGAATTTCATCAGTGTGGTTCGAAGGGAATCCTTG
TAACATGCACTTGATGGATTTGTCGTCGCTGGTTCGCGAGTCGGTAGCCA
AAGCTGGCCTGGTTCCCATGCGTTTCAACTCCATCGGCGCCTCTGATGGC
ATTAGTATGGGCACATCTGGCATGCGATTCAGTTTACAGAGCCGAGAGAT
CATTGCTGATGGAATTGAAACGGTCATGAATGCCCAGTGGTATGATGCTA
ATATCTCGTTGCCTGGCTGTGATAAGAACATGCCAGGTGTGCTGATGGCT
ATGGGTCGGGTCAACCGTCCGAGTATCATGGTGTATGGTGGTAGTATCAA
GCCCGGCTGCAGTGCGGGGGGTAAGCCACTTGACTTGGTCAGCGCCTTTC
AATCGTATGGCCAATATCTCACTGGTGAGATCGACGAGAAGGAACGATTT
GATATTATCCGACACGCTTGCCCAGGTGCTGGTGCCTGTGGGGGTATGTA
TACGGCTAATACACTGGCAACGGCCATCGAGACCCTCGGAATGACGGTCC
CTGGAAGCAGCAGTACACCGGCAGAGGATCCGAGGAAGCTGGCAGAGTGT
GAGGACATCGGTCAGACGGTGAAGAATCTGCTGAAGGAGGACATCCGTCC
CAAGGATATCATGACACGGCAGGCATTTGAAAATGCTATGATTGTTGTGA
ATATTCTTGGAGGCAGCACCAATGCAGTGCTGCACTTGATTGCTATCGCT
AATTCCGTTGGGATCAAATTGACTATCGATGACTTCCAGGCTGTGTCAGA
CAAGACACCTTTCTTAGCTGATCTAAAGCCTTCCGGCAAGTATGTCATGC
ATGACCTGTACAAAGTCGGGGGCACGCCTGCACTGCTGAAGTTCCTGCTC
AGGGAAGGCCTTATTGACGGCTCCGGCGTCACTGTTACTGGCAAAACCAT
GAAAGAGAATGTAGCCTCATGGCCCGAATTTTCACCTGAGCAGCCCATCA
TCCGCCCTCTAAGCAATCCCATCAAGCCAACCGGCCACTTGCAGATCCTT
CGTGGGTCATTGGCCCCCGGCGGCTCGGTTGGAAAAATCACCGGCAAAGA
AGGTCTACGGTTCGAAGGTCTTGCTAAATGTTACGACTTTGAGGACGCTT
TCATTGAGGCTCTCGAACGAGGCGAGATCAAGAAGGGCGAGAAAACGGTC
GTTATTATTCGATATGAAGGGCCCAAAGGCGGCCCCGGGATGCCTGAGAT
GCTCAAGCCCAGCTCAGCTATCATGGGCGCGGGATTGGGTCAGGATGTTG
CGCTACTCACTGATGGAAGATTCTCTGGAGGTAGTCATGGCTTTTTAATT
GGGCATGTTGTGCCTGAGGCTATGGAGGGTGGGCCCATTGCCCTGGTGAA
GGATGGCGATCGGATCGTAATTGATGCGGAGCAAAGAGTGGTTGACCTGC
TGATCACCCCAGAAGAAATGGCAAAGAGAAGAGTGTCTTGGACAGCACCG
GCACCTCGGGCGAAGAAGGGGACATTAAGCAAGTATGCGAAGCTGGTGAG
CGATGCGAGCCATGGGTGCGTGACGGATGGTCCAATATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009082 | branched-chain amino acid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004160 | dihydroxy-acid dehydratase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR020558 |
| InterPro | IPR004404 |
| InterPro | IPR037237 |
| PFAM | PF00920 |
| InterPro | IPR000581 |
| InterPro | IPR042096 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000169 | supercontig | MCQH01000169:636439..638351 + |
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