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ATCC10864_006806-T1, ATCC10864_006806-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006806-T1
Unique NameATCC10864_006806-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:767863..768746-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006806-T1 ID=ATCC10864_006806-T1|Name=ATCC10864_006806-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=884bp|location=Sequence derived from alignment at MCQH01000169:767863..768746- (Aspergillus niger ATCC 10864)
ATGTCCCTCCCACGTTTAACGCGCTCCCTGCGCGGACCCCAGCTCAGCAA
AACCCTTCGCCACTCCCTCACCACCACAACCCGCTACCAATCCACCACTA
CCAACAACAACAAACCCGCCACCTCTACCTCCACAACATCAACATCAACA
ACTCCCAAGCCCACCACTACCTCCTCCTCCTCCTCAACCTCCACCCCCAA
AACCACTACCCCCACCCTCAAAGACCTCCTCGACACCCCACCCTCCCCCG
CAAACCCAACAGAAGACCGCATCGACTGGACGCGCTCCTTCCACGGGCTC
AGCGCGACGCCCTTCCCCAAAGAATGCGCCGACATCCTCCTCGCCCCGAC
CGACCCGGAAGAAGTCGAGATCAAGCCCGACGGCATCCTCTACCTCCCCG
AGATCAAGTACCGACGGATACTGAATAAGGCGTTCGGACCCGGTGGATGG
GGTCTGGTGCCTCGGAGTGAGAGCATTGTTACGCCCAAGATGGTGACGAG
GGAGTATGCGCTTGTTTGTAATGGGCGGTTAGTATTTCCCTAGTTCTCTT
GGGGTGTGTGAGGGTGTGAGGTGTGTGGATGAATCAAGCTGACTACTTGT
GTGTTGCGGCTAGGTTGGTTTCAGTTGCGCGCGGCGAGCAGGATTACTTC
TCTCCCGATGGAATCCCGACTGCTACGGAGGGATGTCGGTCGAATGCATT
GGTGCGGTGTTGTAAGGATCTGGGGATTGCGAGCGAATTGTGGGATCCCA
GGTGGATTCGGAAGTTCAAGGCGCAGTATACGCGGGAGGCGTTTGTGGAG
CATGTGGTGAATAAACGGAAGACGAAGATTTGGGTGAGGAAGGATGATAC
GGTTGGGTATCCGTGGAAGGAGACGAAGTTTTAG
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Coding sequence (CDS) from alignment at MCQH01000169:767863..768746-

>ATCC10864_006806-T1 ID=ATCC10864_006806-T1|Name=ATCC10864_006806-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1596bp|location=Sequence derived from alignment at MCQH01000169:767863..768746- (Aspergillus niger ATCC 10864)
GTTGGTTTCAGTTGCGCGCGGCGAGCAGGATTACTTCTCTCCCGATGGAA
TCCCGACTGCTACGGAGGGATGTCGGTCGAATGCATTGGTGCGGTGTTGT
AAGGATCTGGGGATTGCGAGCGAATTGTGGGATCCCAGGTGGATTCGGAA
GTTCAAGGCGCAGTATACGCGGGAGGCGTTTGTGGAGCATGTGGTGAATA
AACGGAAGACGAAGATTTGGGTGAGGAAGGATGATACGGTTGGGTATCCG
TGGAAGGAGACGAAGTTTTAGATGTCCCTCCCACGTTTAACGCGCTCCCT
GCGCGGACCCCAGCTCAGCAAAACCCTTCGCCACTCCCTCACCACCACAA
CCCGCTACCAATCCACCACTACCAACAACAACAAACCCGCCACCTCTACC
TCCACAACATCAACATCAACAACTCCCAAGCCCACCACTACCTCCTCCTC
CTCCTCAACCTCCACCCCCAAAACCACTACCCCCACCCTCAAAGACCTCC
TCGACACCCCACCCTCCCCCGCAAACCCAACAGAAGACCGCATCGACTGG
ACGCGCTCCTTCCACGGGCTCAGCGCGACGCCCTTCCCCAAAGAATGCGC
CGACATCCTCCTCGCCCCGACCGACCCGGAAGAAGTCGAGATCAAGCCCG
ACGGCATCCTCTACCTCCCCGAGATCAAGTACCGACGGATACTGAATAAG
GCGTTCGGACCCGGTGGATGGGGTCTGGTGCCTCGGAGTGAGAGCATTGT
TACGCCCAAGATGGTGACGAGGGAGTATGCGCTTGTTTGTAATGGGCGGT
TGGTTTCAGTTGCGCGCGGCGAGCAGGATTACTTCTCTCCCGATGGAATC
CCGACTGCTACGGAGGGATGTCGGTCGAATGCATTGGTGCGGTGTTGTAA
GGATCTGGGGATTGCGAGCGAATTGTGGGATCCCAGGTGGATTCGGAAGT
TCAAGGCGCAGTATACGCGGGAGGCGTTTGTGGAGCATGTGGTGAATAAA
CGGAAGACGAAGATTTGGGTGAGGAAGGATGATACGGTTGGGTATCCGTG
GAAGGAGACGAAGTTTTAGATGTCCCTCCCACGTTTAACGCGCTCCCTGC
GCGGACCCCAGCTCAGCAAAACCCTTCGCCACTCCCTCACCACCACAACC
CGCTACCAATCCACCACTACCAACAACAACAAACCCGCCACCTCTACCTC
CACAACATCAACATCAACAACTCCCAAGCCCACCACTACCTCCTCCTCCT
CCTCAACCTCCACCCCCAAAACCACTACCCCCACCCTCAAAGACCTCCTC
GACACCCCACCCTCCCCCGCAAACCCAACAGAAGACCGCATCGACTGGAC
GCGCTCCTTCCACGGGCTCAGCGCGACGCCCTTCCCCAAAGAATGCGCCG
ACATCCTCCTCGCCCCGACCGACCCGGAAGAAGTCGAGATCAAGCCCGAC
GGCATCCTCTACCTCCCCGAGATCAAGTACCGACGGATACTGAATAAGGC
GTTCGGACCCGGTGGATGGGGTCTGGTGCCTCGGAGTGAGAGCATTGTTA
CGCCCAAGATGGTGACGAGGGAGTATGCGCTTGTTTGTAATGGGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000002mitochondrial genome maintenance
Vocabulary: Cellular Component
TermDefinition
GO:0000262mitochondrial chromosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006806ATCC10864_006806Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006806-T1ATCC10864_006806-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006806-T1.cdsATCC10864_006806-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006806-T1.exon2ATCC10864_006806-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006806-T1.exon1ATCC10864_006806-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009446
PFAMPF06420
Properties
Property NameValue
NoteBUSCO:EOG0926484N
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:767863..768746 -
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