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ATCC10864_006856-T1, ATCC10864_006856-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006856-T1
Unique NameATCC10864_006856-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:67773..70520-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006856-T1 ID=ATCC10864_006856-T1|Name=ATCC10864_006856-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2748bp|location=Sequence derived from alignment at MCQH01000170:67773..70520- (Aspergillus niger ATCC 10864)
ATGCAAGTTCTGCGATGTGGAATCCACGGCTTTCATGAAGTGCTAGGCAT
TGATGTGGACGAGATTCGCTTTTATTGGACGATTGAAACCGATGATAAGC
ATGCATCACAACTTGCCTACCGGGTGGTGCTGAGCACCGATGAGGCCGCT
GTGCAAGGAGATGCGATCGTTGAGTCGAAGCTGGCCTGGGATTCAGGTCG
GGTGATGAGCAATGAGCAACGTAACATCATCTGCAAGCCCGATAATGGCT
TCCAGTCGACTTGCAGCTATTACTGGCGAGTGACCCTCTGGGATCAGTCA
GAGCGACCGCATCATAGCGCAGTCAATCACTTCTTCACAGCCTACCCCCG
ATCGCACCTGCTGCCTCCCTATAGCATGAATCAGACCTACATGCCGCATA
CCAGTCTCATTTTTCGCTCCTGGTTCGAGGACGAGCCGAACCGATGGAAA
GCCGTGTGGATTGGTGACGGCGGCGACAAACCAATTTACCTTCGCAAGGC
CTTCGATTTGGCCCAGCCGCCAGCCCGTGCCATTATGTTTGCCTCCGGCC
TTGGACACTTCAACATGACTGTCAATGGCTCCCCAGCGTCAGACCACCGG
CTGGACCCCGGTTGGACCAACTACCATCGTCGGGTGCAATTCACAGCCTA
CGATGTGACGGCCCAGCTGCAGACAGGCGCCAATGTGCTGGGCGCTCACC
TCGGCAATGGTTTCTACGCGGGCGACAAGGGGGAAGATCGCTTTTTCTGG
CCAATGTACGAAGACAACACTTATGTCCGCTATGGCAACGAGCTCTGCTT
TTTCAGTGAACTGCATCTCTTCTACCCCGACGGCTCACACACGACGATGA
TTTCGGATCCGTCCTGGCGTGTCCGCAGAAGCGCAACTAGCCTCGCTAAT
ATCTATGCCTCCGAGAACCACGATAGACGACAGTATCCAACGGGCTGGGA
CACACCCGACTTCGATGATGCAGACTGGGCCTTCGCAAAGCCGCTAACTG
GCCCCCGTGGTCATATCTACTATCAAACTCAGCCGCCTGTGGTGTTGCAT
GAGACCTTCCAACCGGTCAAGATAACAGAGCCGCGTCCAGGTATAGTATG
CTATGATCTGGGGCAGAACGCCTCAACGATGGTGCGCGTGGAGGTTGAGG
GACCAAGAGGATCGGAGATCATTGTCCGTTATAGCGAAACGATCCAAGAG
GACGGCACAGTGTTGATGCCAGACCCCTTGTTCAAGGAATATGAGACAGG
TGTCTTCTCTCGCATTCACCTGGCCGGCACGGGCGCCCCAGAAACCTGGG
AGCCCGACTTCAGTTTCACCAGTGCACGGTATATCCAAGTAGAAGGAGTC
TCCTTGGACGGCAGTGACGGCCGCCCGGTCATCCGATCAGTTGTGGGACG
CCATATCTCATCAGCTGCCCGCCGCCTGGGCACGATGCAGACCGACAAAG
AAGATGTGAATCAACTGCTAAGCGCTCTATCCTGGACCTTCAGCAGCAAT
CTATTCAGTTATCATACCGACTGTCCCCAGATTGAAAAGTTTGGTTGGCT
GGAGGTCACTCATCTGCTGGCACCGGCGACACAATACGTTCGCGACATGG
AAGCTCTATACACCAAGATCCTGGATGACATTCTGGACACCCAGGAGCCC
AGTGGGCTGGTCCCGACCATGGCGCCTGAGATCCGATACATGTGCGGCCC
GCTGCATGATACCATCACCTGGGGCTGTGCCGTGTGTCTTCTGCCCGACA
TCTTGAGGGAGTACTACGGTTCGACGCATGTCATCGCCAAGGTGTTCCCC
GCGGCGGTGCGATACATGGAGTACATGCGCACCAAAGAGCGCCGAGGGGG
CTTGATTGAACACGGACTTGGGGATTGGGGCCGTGGGATTGCCTTTGGTA
ATAACCAGGCTAATATCGAGACCGCTATCTACTACCGGTGCCTACAGTGC
GTGGCTATGATGGCTCGCGAGTTGGGTGAAATGCAGAAGGCAAAAGAATT
CGAACAGTGGGCCGCTCGGATCTACGCCGTGTACAACCGTCACTTGCTAG
TCACCGATGACGCATCTCGACCCTACGCCTACTACACCTCATTAGACAAC
TACCCAGCACGCGACCGGGATGCAATCGCACAGGCCATGGCTTTGCAATT
TGGACTGGTTCCAGAACAGCATCGCAAGGACGTGATGGCTGCCTTCTTGG
ATGATGTAGCGGATGGTCGCATACGTGCCGGAGAGATAGGGCTACGTTTC
CTCTTCAATACCCTGGCCGATGCGAAGCGACCGGATTTGGTGTTGCAGAT
GGCCCGTCAGGAAGAGCACCCGTCCTACATGCGGTTTTTGCGGCGTGGAG
AAACAACTCTGTTGGAGTTTTGGCAAGACGAGTGCCGTAGCAAATGTCAT
GACATGCTGGGGACTATCTATGAATGGTTCTATGCGGCGGTCTTGGGTTT
GAAGCCTACAGGACCGGCATATCGTACGTTTGTGGTAGACCCGCCTTATA
ACGCCGAATTCAAGCATGTCAAGGGAAGCGTGGATTGCCCCTATGGAACT
ATTGCCGTTGAGTTTACGCGCAACGAGCAGGGTCAGGCGGTTGTGAATGT
GCGTGTGCCCTTTGGCACTACTGCCATTGTGAAGCTTCCCCGCAGCGGCA
AGTCTTCGGCATATTGTCGGGAAGGAGAGGAGAGTCGGGCAGTGGACGGG
GGGGAGGTCAGCCTGAGCCACGGCGTGTACTCCATTATTGAAGGATAG
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Coding sequence (CDS) from alignment at MCQH01000170:67773..70520-

>ATCC10864_006856-T1 ID=ATCC10864_006856-T1|Name=ATCC10864_006856-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2748bp|location=Sequence derived from alignment at MCQH01000170:67773..70520- (Aspergillus niger ATCC 10864)
ATGCAAGTTCTGCGATGTGGAATCCACGGCTTTCATGAAGTGCTAGGCAT
TGATGTGGACGAGATTCGCTTTTATTGGACGATTGAAACCGATGATAAGC
ATGCATCACAACTTGCCTACCGGGTGGTGCTGAGCACCGATGAGGCCGCT
GTGCAAGGAGATGCGATCGTTGAGTCGAAGCTGGCCTGGGATTCAGGTCG
GGTGATGAGCAATGAGCAACGTAACATCATCTGCAAGCCCGATAATGGCT
TCCAGTCGACTTGCAGCTATTACTGGCGAGTGACCCTCTGGGATCAGTCA
GAGCGACCGCATCATAGCGCAGTCAATCACTTCTTCACAGCCTACCCCCG
ATCGCACCTGCTGCCTCCCTATAGCATGAATCAGACCTACATGCCGCATA
CCAGTCTCATTTTTCGCTCCTGGTTCGAGGACGAGCCGAACCGATGGAAA
GCCGTGTGGATTGGTGACGGCGGCGACAAACCAATTTACCTTCGCAAGGC
CTTCGATTTGGCCCAGCCGCCAGCCCGTGCCATTATGTTTGCCTCCGGCC
TTGGACACTTCAACATGACTGTCAATGGCTCCCCAGCGTCAGACCACCGG
CTGGACCCCGGTTGGACCAACTACCATCGTCGGGTGCAATTCACAGCCTA
CGATGTGACGGCCCAGCTGCAGACAGGCGCCAATGTGCTGGGCGCTCACC
TCGGCAATGGTTTCTACGCGGGCGACAAGGGGGAAGATCGCTTTTTCTGG
CCAATGTACGAAGACAACACTTATGTCCGCTATGGCAACGAGCTCTGCTT
TTTCAGTGAACTGCATCTCTTCTACCCCGACGGCTCACACACGACGATGA
TTTCGGATCCGTCCTGGCGTGTCCGCAGAAGCGCAACTAGCCTCGCTAAT
ATCTATGCCTCCGAGAACCACGATAGACGACAGTATCCAACGGGCTGGGA
CACACCCGACTTCGATGATGCAGACTGGGCCTTCGCAAAGCCGCTAACTG
GCCCCCGTGGTCATATCTACTATCAAACTCAGCCGCCTGTGGTGTTGCAT
GAGACCTTCCAACCGGTCAAGATAACAGAGCCGCGTCCAGGTATAGTATG
CTATGATCTGGGGCAGAACGCCTCAACGATGGTGCGCGTGGAGGTTGAGG
GACCAAGAGGATCGGAGATCATTGTCCGTTATAGCGAAACGATCCAAGAG
GACGGCACAGTGTTGATGCCAGACCCCTTGTTCAAGGAATATGAGACAGG
TGTCTTCTCTCGCATTCACCTGGCCGGCACGGGCGCCCCAGAAACCTGGG
AGCCCGACTTCAGTTTCACCAGTGCACGGTATATCCAAGTAGAAGGAGTC
TCCTTGGACGGCAGTGACGGCCGCCCGGTCATCCGATCAGTTGTGGGACG
CCATATCTCATCAGCTGCCCGCCGCCTGGGCACGATGCAGACCGACAAAG
AAGATGTGAATCAACTGCTAAGCGCTCTATCCTGGACCTTCAGCAGCAAT
CTATTCAGTTATCATACCGACTGTCCCCAGATTGAAAAGTTTGGTTGGCT
GGAGGTCACTCATCTGCTGGCACCGGCGACACAATACGTTCGCGACATGG
AAGCTCTATACACCAAGATCCTGGATGACATTCTGGACACCCAGGAGCCC
AGTGGGCTGGTCCCGACCATGGCGCCTGAGATCCGATACATGTGCGGCCC
GCTGCATGATACCATCACCTGGGGCTGTGCCGTGTGTCTTCTGCCCGACA
TCTTGAGGGAGTACTACGGTTCGACGCATGTCATCGCCAAGGTGTTCCCC
GCGGCGGTGCGATACATGGAGTACATGCGCACCAAAGAGCGCCGAGGGGG
CTTGATTGAACACGGACTTGGGGATTGGGGCCGTGGGATTGCCTTTGGTA
ATAACCAGGCTAATATCGAGACCGCTATCTACTACCGGTGCCTACAGTGC
GTGGCTATGATGGCTCGCGAGTTGGGTGAAATGCAGAAGGCAAAAGAATT
CGAACAGTGGGCCGCTCGGATCTACGCCGTGTACAACCGTCACTTGCTAG
TCACCGATGACGCATCTCGACCCTACGCCTACTACACCTCATTAGACAAC
TACCCAGCACGCGACCGGGATGCAATCGCACAGGCCATGGCTTTGCAATT
TGGACTGGTTCCAGAACAGCATCGCAAGGACGTGATGGCTGCCTTCTTGG
ATGATGTAGCGGATGGTCGCATACGTGCCGGAGAGATAGGGCTACGTTTC
CTCTTCAATACCCTGGCCGATGCGAAGCGACCGGATTTGGTGTTGCAGAT
GGCCCGTCAGGAAGAGCACCCGTCCTACATGCGGTTTTTGCGGCGTGGAG
AAACAACTCTGTTGGAGTTTTGGCAAGACGAGTGCCGTAGCAAATGTCAT
GACATGCTGGGGACTATCTATGAATGGTTCTATGCGGCGGTCTTGGGTTT
GAAGCCTACAGGACCGGCATATCGTACGTTTGTGGTAGACCCGCCTTATA
ACGCCGAATTCAAGCATGTCAAGGGAAGCGTGGATTGCCCCTATGGAACT
ATTGCCGTTGAGTTTACGCGCAACGAGCAGGGTCAGGCGGTTGTGAATGT
GCGTGTGCCCTTTGGCACTACTGCCATTGTGAAGCTTCCCCGCAGCGGCA
AGTCTTCGGCATATTGTCGGGAAGGAGAGGAGAGTCGGGCAGTGGACGGG
GGGGAGGTCAGCCTGAGCCACGGCGTGTACTCCATTATTGAAGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006856ATCC10864_006856Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006856-T1.cdsATCC10864_006856-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006856-T1.exon1ATCC10864_006856-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006856-T1ATCC10864_006856-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08531
InterProIPR012341
InterProIPR008902
InterProIPR008928
InterProIPR035396
InterProIPR035398
PFAMPF17389
PFAMPF05592
InterProIPR013737
InterProIPR013783
PFAMPF17390
Properties
Property NameValue
NoteCAZy:GH78
NoteCAZy:CBM67
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:67773..70520 -
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