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ATCC10864_006878-T1, ATCC10864_006878-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006878-T1
Unique NameATCC10864_006878-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:121404..122453+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006878-T1 ID=ATCC10864_006878-T1|Name=ATCC10864_006878-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1050bp|location=Sequence derived from alignment at MCQH01000170:121404..122453+ (Aspergillus niger ATCC 10864)
ATGCTCGTCGCCGTTCTCCCCGCATCACCCAAATCCGCCCAGGAGACCAT
CCGGGCTCTCCTGGAAGCAGACCAGTTGACTGCCCCAGTCCACGTGCGCG
CCATCTACCGTGACGTCGCCAAAGCCCCCGCTGAGTTCGTTTCGCATGGT
AGCTTCCACGCGGTCGCAGGTGATCTCAGTAATGCAGCCAGCCTGGACCT
TGGGAACGCTGACACCGTCTTTGCCATCACACCGCCGCGTTATGATGGCT
CCGATATGATGCAGTGGGCCCGCCAGGCCTCGGAAAATACCCGCATAGCG
ATCCAGAAGGCTGGGACGGTCAAACGCCTGGTGCTCCTCTCCAGCATGGG
CGCCGAACAGCCAGAGGGAACAGTGCGTCCTGCCTCTAACCCTCAGTTAC
GCGATTATAGGTACGGGTTTTAATTAATTCGCATAGGGAGAAATCATGAC
GAACCACATTGCGGAAGAGATTCTTAAGGATGTGGTACCCGAGGTCGTCT
TCATGCGATGCGCCTACTTTATGGAGAACTGGGCTCCGGCCATGGAGACT
GTCCAGGCCAAACAACCACACCTGTTCTCGGTCATCACTCCCCTGGACTA
TGAGATTCCAATGGTGAGAGATTCCTATTGACGCTATGAATTGAATAACT
ATAGGATTAGTGGCTGAACCATTCACGCTGCAAGGTCTCCGTCGCCGATA
TCGGAAAGGCATGCGCCACCTATATAATGGCCATGGATAACCCCAAAAAC
CCGTATGTCGTGGAGGTTCACGGTCCACGCGAGTACACGGCGAAGGACGT
GCAGGAAGCATTTCAGGACGTGGCCGGCCATGCAGTCGAACTCCGACCTA
TCGAAAAAGCAGATTTGCCCGCATTTTTCGGTCGATTTCTACCTGAAGCG
TCGGTCGGTCCTTTTGTAGAGATGACCCGGAGTTTCTTGCCGGGAGGAGT
TATTGCTAAAGAGTCTGGTAATTCTCCATCCCCGGACCGCATGTATCGCG
GGCGGACGGAGCTGGTGGATGCTATTCGGCGATTGTTCAGAAAGGGGTAG
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Coding sequence (CDS) from alignment at MCQH01000170:121404..122453+

>ATCC10864_006878-T1 ID=ATCC10864_006878-T1|Name=ATCC10864_006878-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2745bp|location=Sequence derived from alignment at MCQH01000170:121404..122453+ (Aspergillus niger ATCC 10864)
ATGCTCGTCGCCGTTCTCCCCGCATCACCCAAATCCGCCCAGGAGACCAT
CCGGGCTCTCCTGGAAGCAGACCAGTTGACTGCCCCAGTCCACGTGCGCG
CCATCTACCGTGACGTCGCCAAAGCCCCCGCTGAGTTCGTTTCGCATGGT
AGCTTCCACGCGGTCGCAGGTGATCTCAGTAATGCAGCCAGCCTGGACCT
TGGGAACGCTGACACCGTCTTTGCCATCACACCGCCGCGTTATGATGGCT
CCGATATGATGCAGTGGGCCCGCCAGGCCTCGGAAAATACCCGCATAGCG
ATCCAGAAGGCTGGGACGGTCAAACGCCTGGTGCTCCTCTCCAGCATGGG
CGCCGAACAGCCAGAGGGAACAGGAGAAATCATGACGAACCACATTGCGG
AAGAGATTCTTAAGGATGTGGTACCCGAGGTCGTCTTCATGCGATGCGCC
TACTTTATGGAGAACTGGGCTCCGGCCATGGAGACTGTCCAGGCCAAACA
ACCACACCTGTTCTCGGTCATCACTCCCCTGGACTATGAGATTCCAATGG
TCTCCGTCGCCGATATCGGAAAGGCATGCGCCACCTATATAATGGCCATG
GATAACCCCAAAAACCCGTATGTCGTGGAGGTTCACGGTCCACGCGAGTA
CACGGCGAAGGACGTGCAGGAAGCATTTCAGGACGTGGCCGGCCATGCAG
TCGAACTCCGACCTATCGAAAAAGCAGATTTGCCCGCATTTTTCGGTCGA
TTTCTACCTGAAGCGTCGGTCGGTCCTTTTGTAGAGATGACCCGGAGTTT
CTTGCCGGGAGGAGTTATTGCTAAAGAGTCTGGTAATTCTCCATCCCCGG
ACCGCATGTATCGCGGGCGGACGGAGCTGGTGGATGCTATTCGGCGATTG
TTCAGAAAGGGGTAGATGCTCGTCGCCGTTCTCCCCGCATCACCCAAATC
CGCCCAGGAGACCATCCGGGCTCTCCTGGAAGCAGACCAGTTGACTGCCC
CAGTCCACGTGCGCGCCATCTACCGTGACGTCGCCAAAGCCCCCGCTGAG
TTCGTTTCGCATGGTAGCTTCCACGCGGTCGCAGGTGATCTCAGTAATGC
AGCCAGCCTGGACCTTGGGAACGCTGACACCGTCTTTGCCATCACACCGC
CGCGTTATGATGGCTCCGATATGATGCAGTGGGCCCGCCAGGCCTCGGAA
AATACCCGCATAGCGATCCAGAAGGCTGGGACGGTCAAACGCCTGGTGCT
CCTCTCCAGCATGGGCGCCGAACAGCCAGAGGGAACAGGAGAAATCATGA
CGAACCACATTGCGGAAGAGATTCTTAAGGATGTGGTACCCGAGGTCGTC
TTCATGCGATGCGCCTACTTTATGGAGAACTGGGCTCCGGCCATGGAGAC
TGTCCAGGCCAAACAACCACACCTGTTCTCGGTCATCACTCCCCTGGACT
ATGAGATTCCAATGGTCTCCGTCGCCGATATCGGAAAGGCATGCGCCACC
TATATAATGGCCATGGATAACCCCAAAAACCCGTATGTCGTGGAGGTTCA
CGGTCCACGCGAGTACACGGCGAAGGACGTGCAGGAAGCATTTCAGGACG
TGGCCGGCCATGCAGTCGAACTCCGACCTATCGAAAAAGCAGATTTGCCC
GCATTTTTCGGTCGATTTCTACCTGAAGCGTCGGTCGGTCCTTTTGTAGA
GATGACCCGGAGTTTCTTGCCGGGAGGAGTTATTGCTAAAGAGTCTGGTA
ATTCTCCATCCCCGGACCGCATGTATCGCGGGCGGACGGAGCTGGTGGAT
GCTATTCGGCGATTGTTCAGAAAGGGGTAGATGCTCGTCGCCGTTCTCCC
CGCATCACCCAAATCCGCCCAGGAGACCATCCGGGCTCTCCTGGAAGCAG
ACCAGTTGACTGCCCCAGTCCACGTGCGCGCCATCTACCGTGACGTCGCC
AAAGCCCCCGCTGAGTTCGTTTCGCATGGTAGCTTCCACGCGGTCGCAGG
TGATCTCAGTAATGCAGCCAGCCTGGACCTTGGGAACGCTGACACCGTCT
TTGCCATCACACCGCCGCGTTATGATGGCTCCGATATGATGCAGTGGGCC
CGCCAGGCCTCGGAAAATACCCGCATAGCGATCCAGAAGGCTGGGACGGT
CAAACGCCTGGTGCTCCTCTCCAGCATGGGCGCCGAACAGCCAGAGGGAA
CAGGAGAAATCATGACGAACCACATTGCGGAAGAGATTCTTAAGGATGTG
GTACCCGAGGTCGTCTTCATGCGATGCGCCTACTTTATGGAGAACTGGGC
TCCGGCCATGGAGACTGTCCAGGCCAAACAACCACACCTGTTCTCGGTCA
TCACTCCCCTGGACTATGAGATTCCAATGGTCTCCGTCGCCGATATCGGA
AAGGCATGCGCCACCTATATAATGGCCATGGATAACCCCAAAAACCCGTA
TGTCGTGGAGGTTCACGGTCCACGCGAGTACACGGCGAAGGACGTGCAGG
AAGCATTTCAGGACGTGGCCGGCCATGCAGTCGAACTCCGACCTATCGAA
AAAGCAGATTTGCCCGCATTTTTCGGTCGATTTCTACCTGAAGCGTCGGT
CGGTCCTTTTGTAGAGATGACCCGGAGTTTCTTGCCGGGAGGAGTTATTG
CTAAAGAGTCTGGTAATTCTCCATCCCCGGACCGCATGTATCGCGGGCGG
ACGGAGCTGGTGGATGCTATTCGGCGATTGTTCAGAAAGGGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006878ATCC10864_006878Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006878-T1.exon1ATCC10864_006878-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006878-T1.exon2ATCC10864_006878-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006878-T1.exon3ATCC10864_006878-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006878-T1.cdsATCC10864_006878-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006878-T1ATCC10864_006878-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008030
InterProIPR036291
PFAMPF05368
PFAMPF13460
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:121404..122453 +
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