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ATCC10864_006960-T1, ATCC10864_006960-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006960-T1
Unique NameATCC10864_006960-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:325355..325770-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006960-T1 ID=ATCC10864_006960-T1|Name=ATCC10864_006960-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=416bp|location=Sequence derived from alignment at MCQH01000170:325355..325770- (Aspergillus niger ATCC 10864)
ATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCC
GATTCATTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCT
GGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGTAAAT
GGATTTCTGGCGACTTGGTTGCGTGACATTTGACTAATCGACTCGTGTAG
GGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCG
CATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGC
AGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATGCTGATTATATTC
TTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTAT
TCAAGCCGTGCAGTGA
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Coding sequence (CDS) from alignment at MCQH01000170:325355..325770-

>ATCC10864_006960-T1 ID=ATCC10864_006960-T1|Name=ATCC10864_006960-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=864bp|location=Sequence derived from alignment at MCQH01000170:325355..325770- (Aspergillus niger ATCC 10864)
GCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAG
TGAGGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGT
TCGCATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACC
GGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCA
TTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTT
ACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGC
TCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGAC
GAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTAC
AAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGC
GGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAA
GCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTG
CTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGCTCAAGGGCGATA
ACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGACGAGTTCATGAAC
CTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTACAAAGTCCGAAGA
AGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGCGGTGGAGCCGCT
CGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCTTCAGCA
ACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCCGCATAG
AGGGAAAAATCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006960ATCC10864_006960Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006960-T1ATCC10864_006960-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006960-T1.cdsATCC10864_006960-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006960-T1.exon3ATCC10864_006960-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006960-T1.exon2ATCC10864_006960-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006960-T1.exon1ATCC10864_006960-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01423
InterProIPR001163
InterProIPR027078
InterProIPR010920
Properties
Property NameValue
NoteBUSCO:EOG09265NHW
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:325355..325770 -
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