You are here

Home

ATCC10864_006973-T1, ATCC10864_006973-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006973-T1
Unique NameATCC10864_006973-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:363241..364889+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006973-T1 ID=ATCC10864_006973-T1|Name=ATCC10864_006973-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1649bp|location=Sequence derived from alignment at MCQH01000170:363241..364889+ (Aspergillus niger ATCC 10864)
ATGAATTTCACAACCCGCCTATCAGATGCCCGACAATGGCTTGACAAAAA
TTTGACATATGATCAAGACCAAGACGTGAACACATTCGAGACCACGATAC
GTATGCTCGGAGGACTGCTGTCCGCTCATTACCTATCCACTCAGCTCCCA
GACGCTTCCTCCGAGTGGGACCATGTTTACCTGTCCAAAGCAGTAGACCT
AGCAGACCGACTGCGTGCAGCATATGACTCGGGGTCAGGGATCCCTTATG
CTAGCGTCAACCTAGCAAAACGTGAAGGTATCCGCTCTCATGCTGATGGC
GGGGCGTCATCTACGGCTGAAGCAGCTACCGTGCAGTTGGAGATGAAGTA
TCTCTCCATTATCACGGGAAATGATGTGTATTGGCATAAAGCTGAAAGGG
TCATGGAAGTGTTAGATAGCCACGGCGCCAAGGATGGTCTTGTGCCCATT
TTTGTACACCCGGACACTGGGAGGTTTTGGCATAAAACCATCCGTCTCGG
AAGTCGTGGTGATTCGTACTATGGTATGTCTGCATGACCAATCCACATCG
TAGATCCTGGCTCACATAGCTACAGAATACTTGGTGAAGCAATACCTACA
GACCAACGAATCAATCTACGGGGAGATGTGGGAAGAGGCGCTGACCGGGA
TTCAGAAGAATCTTGTCACTTCCACCAAGTACTCAAACCTCCAATACATT
GCCGAACTTCCAGGCGGAATTGGTAGCCGCCTTTCCCCAAAGATGGACCA
TCTTGTTTGCTTTCTACCAGGATCCATTGCCATTGGGGCTACGGAAGCAC
TGACGGAAGCGGAGGCCCGCAGAACGGGACGCTGGAACGCTCAAAAGGAG
GAGCAGATGCATCTGGCAAGGGAGCTGACAAAGACATGCTGGGTACAGTA
CGCAGTAACGGAGACTGGGCTGGCTCCGGAAATTGTGTGGTTTGAGACAG
AAGATGCCAACCTTGAACCATCTACCAAGGCGCCACGAGCCTCAAGCAGA
GATGACTTAAAGTCCTGGATCAAGGACATTAACATCCGGCTGATAGATGC
CGATAACTTGCAACGTCCGGAGACTGTGGAAAGCCTCTTCCTAATGTACC
GTGTCACGAAAGATCCGATATATCGACAATGGGGATGGGAGATTTTCAAG
GCATTTCAAAAGCACACGCGAGTTAAAGACGGGGAAGGATACACATCTCT
AAGTGATGTCACAATAGTTCCACCGAAACGACGGGATAATATGGAAAGCT
TCTGGCTGGTATGCTAAGTACCATCACGGGCATGCGTAGTGGAAGCTGAC
ATCTACCAGGCCGAAACCTTGAAATACCTCTATCTCCTCTTCTCACCAAA
TGACTTTCTTCCATTGACCGATGTGGTGTTCAACACCGAGGCCCATGTAT
TTCCACGTCTACACCAAGTAAGGTACAAGACTGGCTGGAAAAGAAGACGG
AGGATGTGAGAATCGCAGGTCACTATTTACTTATCGCTAATGCAGCTAGT
GGAAGCTGCTTCAAAACAGGAATTTTGTCTTCCGCCTCGAAGTCATCGTA
TCCACAGATATTCTAGTTGCTTTAGACTTGCTGTGGGATTCAGAACGTGT
TTATGGTCGGGAAAAGCCAGAACAGTACAACATCTGCGTACACTATTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000170:363241..364889+

>ATCC10864_006973-T1 ID=ATCC10864_006973-T1|Name=ATCC10864_006973-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5856bp|location=Sequence derived from alignment at MCQH01000170:363241..364889+ (Aspergillus niger ATCC 10864)
ATGAATTTCACAACCCGCCTATCAGATGCCCGACAATGGCTTGACAAAAA
TTTGACATATGATCAAGACCAAGACGTGAACACATTCGAGACCACGATAC
GTATGCTCGGAGGACTGCTGTCCGCTCATTACCTATCCACTCAGCTCCCA
GACGCTTCCTCCGAGTGGGACCATGTTTACCTGTCCAAAGCAGTAGACCT
AGCAGACCGACTGCGTGCAGCATATGACTCGGGGTCAGGGATCCCTTATG
CTAGCGTCAACCTAGCAAAACGTGAAGGTATCCGCTCTCATGCTGATGGC
GGGGCGTCATCTACGGCTGAAGCAGCTACCGTGCAGTTGGAGATGAAGTA
TCTCTCCATTATCACGGGAAATGATGTGTATTGGCATAAAGCTGAAAGGG
TCATGGAAGTGTTAGATAGCCACGGCGCCAAGGATGGTCTTGTGCCCATT
TTTGTACACCCGGACACTGGGAGGTTTTGGCATAAAACCATCCGTCTCGG
AAGTCGTGGTGATTCGTACTATGAATACTTGGTGAAGCAATACCTACAGA
CCAACGAATCAATCTACGGGGAGATGTGGGAAGAGGCGCTGACCGGGATT
CAGAAGAATCTTGTCACTTCCACCAAGTACTCAAACCTCCAATACATTGC
CGAACTTCCAGGCGGAATTGGTAGCCGCCTTTCCCCAAAGATGGACCATC
TTGTTTGCTTTCTACCAGGATCCATTGCCATTGGGGCTACGGAAGCACTG
ACGGAAGCGGAGGCCCGCAGAACGGGACGCTGGAACGCTCAAAAGGAGGA
GCAGATGCATCTGGCAAGGGAGCTGACAAAGACATGCTGGGTACAGTACG
CAGTAACGGAGACTGGGCTGGCTCCGGAAATTGTGTGGTTTGAGACAGAA
GATGCCAACCTTGAACCATCTACCAAGGCGCCACGAGCCTCAAGCAGAGA
TGACTTAAAGTCCTGGATCAAGGACATTAACATCCGGCTGATAGATGCCG
ATAACTTGCAACGTCCGGAGACTGTGGAAAGCCTCTTCCTAATGTACCGT
GTCACGAAAGATCCGATATATCGACAATGGGGATGGGAGATTTTCAAGGC
ATTTCAAAAGCACACGCGAGTTAAAGACGGGGAAGGATACACATCTCTAA
GTGATGTCACAATAGTTCCACCGAAACGACGGGATAATATGGAAAGCTTC
TGGCTGGCCGAAACCTTGAAATACCTCTATCTCCTCTTCTCACCAAATGA
CTTTCTTCCATTGACCGATGTGGTGTTCAACACCGAGGCCCATGTATTTC
CACGTCTACACCAATGGAAGCTGCTTCAAAACAGGAATTTTGTCTTCCGC
CTCGAAGTCATCGTATCCACAGATATTCTAGTTGCTTTAGACTTGCTGTG
GGATTCAGAACGTGTTTATGGTCGGGAAAAGCCAGAACAGTACAACATCT
GCGTACACTATTGAATGAATTTCACAACCCGCCTATCAGATGCCCGACAA
TGGCTTGACAAAAATTTGACATATGATCAAGACCAAGACGTGAACACATT
CGAGACCACGATACGTATGCTCGGAGGACTGCTGTCCGCTCATTACCTAT
CCACTCAGCTCCCAGACGCTTCCTCCGAGTGGGACCATGTTTACCTGTCC
AAAGCAGTAGACCTAGCAGACCGACTGCGTGCAGCATATGACTCGGGGTC
AGGGATCCCTTATGCTAGCGTCAACCTAGCAAAACGTGAAGGTATCCGCT
CTCATGCTGATGGCGGGGCGTCATCTACGGCTGAAGCAGCTACCGTGCAG
TTGGAGATGAAGTATCTCTCCATTATCACGGGAAATGATGTGTATTGGCA
TAAAGCTGAAAGGGTCATGGAAGTGTTAGATAGCCACGGCGCCAAGGATG
GTCTTGTGCCCATTTTTGTACACCCGGACACTGGGAGGTTTTGGCATAAA
ACCATCCGTCTCGGAAGTCGTGGTGATTCGTACTATGAATACTTGGTGAA
GCAATACCTACAGACCAACGAATCAATCTACGGGGAGATGTGGGAAGAGG
CGCTGACCGGGATTCAGAAGAATCTTGTCACTTCCACCAAGTACTCAAAC
CTCCAATACATTGCCGAACTTCCAGGCGGAATTGGTAGCCGCCTTTCCCC
AAAGATGGACCATCTTGTTTGCTTTCTACCAGGATCCATTGCCATTGGGG
CTACGGAAGCACTGACGGAAGCGGAGGCCCGCAGAACGGGACGCTGGAAC
GCTCAAAAGGAGGAGCAGATGCATCTGGCAAGGGAGCTGACAAAGACATG
CTGGGTACAGTACGCAGTAACGGAGACTGGGCTGGCTCCGGAAATTGTGT
GGTTTGAGACAGAAGATGCCAACCTTGAACCATCTACCAAGGCGCCACGA
GCCTCAAGCAGAGATGACTTAAAGTCCTGGATCAAGGACATTAACATCCG
GCTGATAGATGCCGATAACTTGCAACGTCCGGAGACTGTGGAAAGCCTCT
TCCTAATGTACCGTGTCACGAAAGATCCGATATATCGACAATGGGGATGG
GAGATTTTCAAGGCATTTCAAAAGCACACGCGAGTTAAAGACGGGGAAGG
ATACACATCTCTAAGTGATGTCACAATAGTTCCACCGAAACGACGGGATA
ATATGGAAAGCTTCTGGCTGGCCGAAACCTTGAAATACCTCTATCTCCTC
TTCTCACCAAATGACTTTCTTCCATTGACCGATGTGGTGTTCAACACCGA
GGCCCATGTATTTCCACGTCTACACCAATGGAAGCTGCTTCAAAACAGGA
ATTTTGTCTTCCGCCTCGAAGTCATCGTATCCACAGATATTCTAGTTGCT
TTAGACTTGCTGTGGGATTCAGAACGTGTTTATGGTCGGGAAAAGCCAGA
ACAGTACAACATCTGCGTACACTATTGAATGAATTTCACAACCCGCCTAT
CAGATGCCCGACAATGGCTTGACAAAAATTTGACATATGATCAAGACCAA
GACGTGAACACATTCGAGACCACGATACGTATGCTCGGAGGACTGCTGTC
CGCTCATTACCTATCCACTCAGCTCCCAGACGCTTCCTCCGAGTGGGACC
ATGTTTACCTGTCCAAAGCAGTAGACCTAGCAGACCGACTGCGTGCAGCA
TATGACTCGGGGTCAGGGATCCCTTATGCTAGCGTCAACCTAGCAAAACG
TGAAGGTATCCGCTCTCATGCTGATGGCGGGGCGTCATCTACGGCTGAAG
CAGCTACCGTGCAGTTGGAGATGAAGTATCTCTCCATTATCACGGGAAAT
GATGTGTATTGGCATAAAGCTGAAAGGGTCATGGAAGTGTTAGATAGCCA
CGGCGCCAAGGATGGTCTTGTGCCCATTTTTGTACACCCGGACACTGGGA
GGTTTTGGCATAAAACCATCCGTCTCGGAAGTCGTGGTGATTCGTACTAT
GAATACTTGGTGAAGCAATACCTACAGACCAACGAATCAATCTACGGGGA
GATGTGGGAAGAGGCGCTGACCGGGATTCAGAAGAATCTTGTCACTTCCA
CCAAGTACTCAAACCTCCAATACATTGCCGAACTTCCAGGCGGAATTGGT
AGCCGCCTTTCCCCAAAGATGGACCATCTTGTTTGCTTTCTACCAGGATC
CATTGCCATTGGGGCTACGGAAGCACTGACGGAAGCGGAGGCCCGCAGAA
CGGGACGCTGGAACGCTCAAAAGGAGGAGCAGATGCATCTGGCAAGGGAG
CTGACAAAGACATGCTGGGTACAGTACGCAGTAACGGAGACTGGGCTGGC
TCCGGAAATTGTGTGGTTTGAGACAGAAGATGCCAACCTTGAACCATCTA
CCAAGGCGCCACGAGCCTCAAGCAGAGATGACTTAAAGTCCTGGATCAAG
GACATTAACATCCGGCTGATAGATGCCGATAACTTGCAACGTCCGGAGAC
TGTGGAAAGCCTCTTCCTAATGTACCGTGTCACGAAAGATCCGATATATC
GACAATGGGGATGGGAGATTTTCAAGGCATTTCAAAAGCACACGCGAGTT
AAAGACGGGGAAGGATACACATCTCTAAGTGATGTCACAATAGTTCCACC
GAAACGACGGGATAATATGGAAAGCTTCTGGCTGGCCGAAACCTTGAAAT
ACCTCTATCTCCTCTTCTCACCAAATGACTTTCTTCCATTGACCGATGTG
GTGTTCAACACCGAGGCCCATGTATTTCCACGTCTACACCAATGGAAGCT
GCTTCAAAACAGGAATTTTGTCTTCCGCCTCGAAGTCATCGTATCCACAG
ATATTCTAGTTGCTTTAGACTTGCTGTGGGATTCAGAACGTGTTTATGGT
CGGGAAAAGCCAGAACAGTACAACATCTGCGTACACTATTGAATGAATTT
CACAACCCGCCTATCAGATGCCCGACAATGGCTTGACAAAAATTTGACAT
ATGATCAAGACCAAGACGTGAACACATTCGAGACCACGATACGTATGCTC
GGAGGACTGCTGTCCGCTCATTACCTATCCACTCAGCTCCCAGACGCTTC
CTCCGAGTGGGACCATGTTTACCTGTCCAAAGCAGTAGACCTAGCAGACC
GACTGCGTGCAGCATATGACTCGGGGTCAGGGATCCCTTATGCTAGCGTC
AACCTAGCAAAACGTGAAGGTATCCGCTCTCATGCTGATGGCGGGGCGTC
ATCTACGGCTGAAGCAGCTACCGTGCAGTTGGAGATGAAGTATCTCTCCA
TTATCACGGGAAATGATGTGTATTGGCATAAAGCTGAAAGGGTCATGGAA
GTGTTAGATAGCCACGGCGCCAAGGATGGTCTTGTGCCCATTTTTGTACA
CCCGGACACTGGGAGGTTTTGGCATAAAACCATCCGTCTCGGAAGTCGTG
GTGATTCGTACTATGAATACTTGGTGAAGCAATACCTACAGACCAACGAA
TCAATCTACGGGGAGATGTGGGAAGAGGCGCTGACCGGGATTCAGAAGAA
TCTTGTCACTTCCACCAAGTACTCAAACCTCCAATACATTGCCGAACTTC
CAGGCGGAATTGGTAGCCGCCTTTCCCCAAAGATGGACCATCTTGTTTGC
TTTCTACCAGGATCCATTGCCATTGGGGCTACGGAAGCACTGACGGAAGC
GGAGGCCCGCAGAACGGGACGCTGGAACGCTCAAAAGGAGGAGCAGATGC
ATCTGGCAAGGGAGCTGACAAAGACATGCTGGGTACAGTACGCAGTAACG
GAGACTGGGCTGGCTCCGGAAATTGTGTGGTTTGAGACAGAAGATGCCAA
CCTTGAACCATCTACCAAGGCGCCACGAGCCTCAAGCAGAGATGACTTAA
AGTCCTGGATCAAGGACATTAACATCCGGCTGATAGATGCCGATAACTTG
CAACGTCCGGAGACTGTGGAAAGCCTCTTCCTAATGTACCGTGTCACGAA
AGATCCGATATATCGACAATGGGGATGGGAGATTTTCAAGGCATTTCAAA
AGCACACGCGAGTTAAAGACGGGGAAGGATACACATCTCTAAGTGATGTC
ACAATAGTTCCACCGAAACGACGGGATAATATGGAAAGCTTCTGGCTGGC
CGAAACCTTGAAATACCTCTATCTCCTCTTCTCACCAAATGACTTTCTTC
CATTGACCGATGTGGTGTTCAACACCGAGGCCCATGTATTTCCACGTCTA
CACCAATGGAAGCTGCTTCAAAACAGGAATTTTGTCTTCCGCCTCGAAGT
CATCGTATCCACAGATATTCTAGTTGCTTTAGACTTGCTGTGGGATTCAG
AACGTGTTTATGGTCGGGAAAAGCCAGAACAGTACAACATCTGCGTACAC
TATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006973ATCC10864_006973Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006973-T1.exon1ATCC10864_006973-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006973-T1.exon2ATCC10864_006973-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006973-T1.exon3ATCC10864_006973-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006973-T1.exon4ATCC10864_006973-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006973-T1.cdsATCC10864_006973-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006973-T1ATCC10864_006973-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01532
InterProIPR036026
InterProIPR001382
InterProIPR012341
Properties
Property NameValue
NoteCAZy:GH47
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:363241..364889 +
Powered by Drupal