You are here

Home

ATCC10864_007202-T1, ATCC10864_007202-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007202-T1
Unique NameATCC10864_007202-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000172:377594..379161-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007202-T1 ID=ATCC10864_007202-T1|Name=ATCC10864_007202-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1568bp|location=Sequence derived from alignment at MCQH01000172:377594..379161- (Aspergillus niger ATCC 10864)
ATGAATGACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCGCTCCAC
CTGCAATGCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGAAGCCAG
CCTGTCGACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGTATATCG
CGACGCTTAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGAGAGCGA
TTATCGTCGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAGACTCGC
GAGCGCGGAATTGTTCCAGGAACAGTCACGGCAATAATAACAGCAGCAGC
AACAGCAGAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGACAGTGTT
GGATGATACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGAGTGTCT
TGGATCCTGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGTGATTGC
TTCTTGGATGGGGCTACTCCCACGGCTCTATGTAAGTGTCGCTCTTGTGC
CTGTTACTATATAGCTGTGTGATGTTGATTGAAACAGTCGCGGATAGTGG
CTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTCATTGCCAACCCGC
CGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTCAATTGTGAGCAGT
GTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAGACCCGAAGCATAT
TTCGAGAGGTTTTATTCAGGATACACCATTCATCACACCCACGACCTTGG
ATAATAAGATTGGCATCATGGATGCTCCGTCGGAGGCAAAATATTTGAAA
GAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCATGGATAATTTCCT
GACCAGACAGACAGCCACTGAGACAAATGCATTTGCTCAAGCTAAGATGA
CAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGAGATGATGCCCGTA
TCAGCCGTGCTAGCACCACACGCATATCAATTTCAGTGTCATGAGTACAC
GATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATACGAATGGGACCGT
ATATGTCGATTGACCATATTCTTCATTGTCAGCGTATGCTGCTGAATGTA
TCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCACGAAAAAGGATAT
ACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATGACTAATTTAGAGG
CCATAACGACCGGGGAGGCCGGGCATACGCAGAGACTCCTGTACAACGGG
TACCATGAGCATATGCTGCCGGACTGCAAGCAAGATGTTCCAGGAAATAT
GGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGGAGTCAAATTGATG
CGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTCTGGTGACAAATTC
TTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAGATCTGTTGTCGAC
GGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCGGCTCGCATATCAT
TGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCATGCTGCAGATGAAG
AGGATGACCAGGGTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000172:377594..379161-

>ATCC10864_007202-T1 ID=ATCC10864_007202-T1|Name=ATCC10864_007202-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3024bp|location=Sequence derived from alignment at MCQH01000172:377594..379161- (Aspergillus niger ATCC 10864)
TCGCGGATAGTGGCTTCGACTTATTCTCCGATAGCTGGGTGCAAGAGTTC
ATTGCCAACCCGCCGGTCGATCTCGCGCCGGAAGGTTTACTCCTGGATTC
AATTGTGAGCAGTGTCAAGCCTGAAAGTACTGGCGGTCGTACTCCAGTAG
ACCCGAAGCATATTTCGAGAGGTTTTATTCAGGATACACCATTCATCACA
CCCACGACCTTGGATAATAAGATTGGCATCATGGATGCTCCGTCGGAGGC
AAAATATTTGAAAGAGGATCCGCTGGCTTGGTCGTTGCCGTTCTCGGCCA
TGGATAATTTCCTGACCAGACAGACAGCCACTGAGACAAATGCATTTGCT
CAAGCTAAGATGACAAAGAGGCCATACCTGTATGGCCTCCCTGCGGGTGA
GATGATGCCCGTATCAGCCGTGCTAGCACCACACGCATATCAATTTCAGT
GTCATGAGTACACGATCCAGGAATCGTTCAGGCAGATGTCGATCGCGATA
CGAATGGGACCGTATATGTCGATTGACCATATTCTTCATTGTCAGCGTAT
GCTGCTGAATGTATCCGACACAATTCTCAAATGTTGCGTCTGCTGCATCA
CGAAAAAGGATATACTCATGGTCGTCGTTGTTAATATCGACAGTCTAATG
ACTAATTTAGAGGCCATAACGACCGGGGAGGCCGGGCATACGCAGAGACT
CCTGTACAACGGGTACCATGAGCATATGCTGCCGGACTGCAAGCAAGATG
TTCCAGGAAATATGGCAAGACGGTATCGGAGTGGTGGACTGCATTTCAGG
AGTCAAATTGATGCGTGTCCATTGGTTGTCGGCAAGTTCTGCGTCCAGTC
TGGTGACAAATTCTTTTGTATCCTGCAGATCTTGTACAGCCAGTTATCAG
ATCTGTTGTCGACGGTCAAAAGAATAAATCTCTATACGCAGGAGTCATCG
GCTCGCATATCATTGACTAGAGAGACTGAGAGGAGATTAGAGGAGGTCAT
GCTGCAGATGAAGAGGATGACCAGGGTGTAGATGAATGACCATCCCCACC
CCCTTCCCAAAAGCGTCAAAGTCCGCTCCACCTGCAATGCCTGCCAACAA
GCCAAGATCCGCTGCAGTCATGAGAAGCCAGCCTGTCGACGGTGTCAGAA
GCACAACATCGACTGTGTCTACAGTATATCGCGACGCTTAGGGCGACCAG
CGAAGAAGAAAGATGCCGACGATGAGAGCGATTATCGTCGAGATCGTGAG
TTTCTAGACGGGCCTAGGAAGCAAGACTCGCGAGCGCGGAATTGTTCCAG
GAACAGTCACGGCAATAATAACAGCAGCAGCAACAGCAGAAAGAGAAGGA
TGAAGCTGGAGGATGAGCAAGAGACAGTGTTGGATGATACTCTCCTGCTC
TTGGACAAGGCAGGTGGGAGTCAGAGTGTCTTGGATCCTGTTGGTGCGAT
AGATCCGGTATCTAGTTTACCGGGTGATTGCTTCTTGGATGGGGCTACTC
CCACGGCTCTATTCGCGGATAGTGGCTTCGACTTATTCTCCGATAGCTGG
GTGCAAGAGTTCATTGCCAACCCGCCGGTCGATCTCGCGCCGGAAGGTTT
ACTCCTGGATTCAATTGTGAGCAGTGTCAAGCCTGAAAGTACTGGCGGTC
GTACTCCAGTAGACCCGAAGCATATTTCGAGAGGTTTTATTCAGGATACA
CCATTCATCACACCCACGACCTTGGATAATAAGATTGGCATCATGGATGC
TCCGTCGGAGGCAAAATATTTGAAAGAGGATCCGCTGGCTTGGTCGTTGC
CGTTCTCGGCCATGGATAATTTCCTGACCAGACAGACAGCCACTGAGACA
AATGCATTTGCTCAAGCTAAGATGACAAAGAGGCCATACCTGTATGGCCT
CCCTGCGGGTGAGATGATGCCCGTATCAGCCGTGCTAGCACCACACGCAT
ATCAATTTCAGTGTCATGAGTACACGATCCAGGAATCGTTCAGGCAGATG
TCGATCGCGATACGAATGGGACCGTATATGTCGATTGACCATATTCTTCA
TTGTCAGCGTATGCTGCTGAATGTATCCGACACAATTCTCAAATGTTGCG
TCTGCTGCATCACGAAAAAGGATATACTCATGGTCGTCGTTGTTAATATC
GACAGTCTAATGACTAATTTAGAGGCCATAACGACCGGGGAGGCCGGGCA
TACGCAGAGACTCCTGTACAACGGGTACCATGAGCATATGCTGCCGGACT
GCAAGCAAGATGTTCCAGGAAATATGGCAAGACGGTATCGGAGTGGTGGA
CTGCATTTCAGGAGTCAAATTGATGCGTGTCCATTGGTTGTCGGCAAGTT
CTGCGTCCAGTCTGGTGACAAATTCTTTTGTATCCTGCAGATCTTGTACA
GCCAGTTATCAGATCTGTTGTCGACGGTCAAAAGAATAAATCTCTATACG
CAGGAGTCATCGGCTCGCATATCATTGACTAGAGAGACTGAGAGGAGATT
AGAGGAGGTCATGCTGCAGATGAAGAGGATGACCAGGGTGTAGATGAATG
ACCATCCCCACCCCCTTCCCAAAAGCGTCAAAGTCCGCTCCACCTGCAAT
GCCTGCCAACAAGCCAAGATCCGCTGCAGTCATGAGAAGCCAGCCTGTCG
ACGGTGTCAGAAGCACAACATCGACTGTGTCTACAGTATATCGCGACGCT
TAGGGCGACCAGCGAAGAAGAAAGATGCCGACGATGAGAGCGATTATCGT
CGAGATCGTGAGTTTCTAGACGGGCCTAGGAAGCAAGACTCGCGAGCGCG
GAATTGTTCCAGGAACAGTCACGGCAATAATAACAGCAGCAGCAACAGCA
GAAAGAGAAGGATGAAGCTGGAGGATGAGCAAGAGACAGTGTTGGATGAT
ACTCTCCTGCTCTTGGACAAGGCAGGTGGGAGTCAGAGTGTCTTGGATCC
TGTTGGTGCGATAGATCCGGTATCTAGTTTACCGGGTGATTGCTTCTTGG
ATGGGGCTACTCCCACGGCTCTAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007202ATCC10864_007202Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007202-T1ATCC10864_007202-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007202-T1.cdsATCC10864_007202-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007202-T1.exon2ATCC10864_007202-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007202-T1.exon1ATCC10864_007202-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000172supercontigMCQH01000172:377594..379161 -
Powered by Drupal