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ATCC10864_007239-T1, ATCC10864_007239-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007239-T1
Unique NameATCC10864_007239-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000172:499027..500751-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007239-T1 ID=ATCC10864_007239-T1|Name=ATCC10864_007239-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1725bp|location=Sequence derived from alignment at MCQH01000172:499027..500751- (Aspergillus niger ATCC 10864)
ATGGTCTCAATGTCGGCCCTGCGACACGGGCTTGGGGTCCTCTATCTTGC
TAGCTGGCTGGGGTCGTCGCTGGCTGCCAGCACCGAGCAATGGAAGTCCC
GGTCAATCTATCAGACCATGACGGATCGGTTCGCGCGCACTGATGGCTCA
ACCACCTCCCCCTGCAACACCACGGAGGGTCTGTACTGTGGTGGTACCTG
GCGCGGCATGATCAACCATCTAGATTACATCCAGGGGATGGGCTTTGATG
CCGTCATGATCTCCCCTATCATCGAGAACGTCGAAGGTCGCGTGGAGTAC
GGAGAAGCCTATCACGGCTATTGGCCCTTGGATCTGTACTCCCTCAACTC
GCACTTTGGAACGCACCAGGATCTACTGGACCTGAGTGATGCCCTGCATG
CTCGCGACATGTATCTGATGATGGACACGGTCATCAACAACATGGCCTAC
ATCACCAATGGCTCCGACCCCGCCACCCACATCGACTACTCAACCCTGAC
CCCCTTCAACAGCTCGTCTTACTACCATCCGTACTGTAAGATCACCGACT
GGAATAACTTCACCAATGCCCAGCTGTGCCAAACCGGTGACAACATCGTG
GCCTTGCCCGATCTGTATACCGAGCATGCCGAGGTGCAAGAAACCCTGAG
CAACTGGGCCAAGGAAGTCATCTCCACCTATTCCATCGACGGCCTCCGCA
TCGATGCAGCAAAACATGTGAACCCCGGCTTCCTGAAGAATTTCGGCGAT
GCGCTAGATATCTTCATGACCGGCGAAGTGATGCAGCAAGAGTTCAGCAC
GATCTGCGATTATCAGAACAACTACATCGGCAGTCTCCCGAATTACCCCG
TCTACTACGCCATGTTGAAGGCCTTTACCTTGGGCAACACCAGCGCCCTG
GCCACTGAGGTCCAGTCGATGAAGAATTCCTGTAATGATGTGACCGCCTT
GTCGTCATTCTCCGAAAACCACGATGTCGCGCGATTTGCCAGCATGACCC
ATGACATGGCTGTATGAACTCTGCTTGACTTCACAGACCCCTTTCCTAGC
TAACATTGTCCCTACTAGCTCGCGAAGAATATTCTCACATTCACTCTTCT
CTTTGACGGTGTTCCCATGATCTATCAAGGTCAAGAGCAGCATCTCGACG
GCCCCGGCAGTCCGGAAAACCGAGAAGCGATATGGCTCTCTGAGTACAAC
ACCGACGCCGAGCTCTACAAGTTGATCGGCAAGTTGAACGCCATCCGGAA
GCACGCCTACCGACTCGACAATCACTACCCCGATGTCGAGACGTACCCCA
TCTTCGAAGGTGGCAGTGAACTGGGATTCCGCAAGGGAATCGAAGGCCGA
CAGGTGGTCATGCTTCTGTCCACGCAAGGCACGAACAGCAGCGCTTACAA
CCTCTCGATGCCGGTGAGTTTCATGGGTGGCACAGTAGTGACCGAGATTC
TGAACTGCGTCAACTACACGGTCAACGCCCAGAGCGAACTCGTGGTTCCG
ATGGATAAAGGAGAGCCGCGCGTGTTCTTCCCGGCGGATCTGATGCCCGG
CAGTGGGCTGTGCGGACTTCCTGTCGCGAATGTCACCTATGCTGCCTTGA
GGACGCAGGGCGCAGCGGCGGCGGAGGCTGCCTTGTCGCTAGGTATCAAG
ACTGATGCAGCTTCTAGTGCTTTGCTTTCTCTGGGGCTGTCTGTGGTGGC
GGGTCTGATTGTGGGGATGTGGTAA
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Coding sequence (CDS) from alignment at MCQH01000172:499027..500751-

>ATCC10864_007239-T1 ID=ATCC10864_007239-T1|Name=ATCC10864_007239-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3336bp|location=Sequence derived from alignment at MCQH01000172:499027..500751- (Aspergillus niger ATCC 10864)
CTCGCGAAGAATATTCTCACATTCACTCTTCTCTTTGACGGTGTTCCCAT
GATCTATCAAGGTCAAGAGCAGCATCTCGACGGCCCCGGCAGTCCGGAAA
ACCGAGAAGCGATATGGCTCTCTGAGTACAACACCGACGCCGAGCTCTAC
AAGTTGATCGGCAAGTTGAACGCCATCCGGAAGCACGCCTACCGACTCGA
CAATCACTACCCCGATGTCGAGACGTACCCCATCTTCGAAGGTGGCAGTG
AACTGGGATTCCGCAAGGGAATCGAAGGCCGACAGGTGGTCATGCTTCTG
TCCACGCAAGGCACGAACAGCAGCGCTTACAACCTCTCGATGCCGGTGAG
TTTCATGGGTGGCACAGTAGTGACCGAGATTCTGAACTGCGTCAACTACA
CGGTCAACGCCCAGAGCGAACTCGTGGTTCCGATGGATAAAGGAGAGCCG
CGCGTGTTCTTCCCGGCGGATCTGATGCCCGGCAGTGGGCTGTGCGGACT
TCCTGTCGCGAATGTCACCTATGCTGCCTTGAGGACGCAGGGCGCAGCGG
CGGCGGAGGCTGCCTTGTCGCTAGGTATCAAGACTGATGCAGCTTCTAGT
GCTTTGCTTTCTCTGGGGCTGTCTGTGGTGGCGGGTCTGATTGTGGGGAT
GTGGTAAATGGTCTCAATGTCGGCCCTGCGACACGGGCTTGGGGTCCTCT
ATCTTGCTAGCTGGCTGGGGTCGTCGCTGGCTGCCAGCACCGAGCAATGG
AAGTCCCGGTCAATCTATCAGACCATGACGGATCGGTTCGCGCGCACTGA
TGGCTCAACCACCTCCCCCTGCAACACCACGGAGGGTCTGTACTGTGGTG
GTACCTGGCGCGGCATGATCAACCATCTAGATTACATCCAGGGGATGGGC
TTTGATGCCGTCATGATCTCCCCTATCATCGAGAACGTCGAAGGTCGCGT
GGAGTACGGAGAAGCCTATCACGGCTATTGGCCCTTGGATCTGTACTCCC
TCAACTCGCACTTTGGAACGCACCAGGATCTACTGGACCTGAGTGATGCC
CTGCATGCTCGCGACATGTATCTGATGATGGACACGGTCATCAACAACAT
GGCCTACATCACCAATGGCTCCGACCCCGCCACCCACATCGACTACTCAA
CCCTGACCCCCTTCAACAGCTCGTCTTACTACCATCCGTACTGTAAGATC
ACCGACTGGAATAACTTCACCAATGCCCAGCTGTGCCAAACCGGTGACAA
CATCGTGGCCTTGCCCGATCTGTATACCGAGCATGCCGAGGTGCAAGAAA
CCCTGAGCAACTGGGCCAAGGAAGTCATCTCCACCTATTCCATCGACGGC
CTCCGCATCGATGCAGCAAAACATGTGAACCCCGGCTTCCTGAAGAATTT
CGGCGATGCGCTAGATATCTTCATGACCGGCGAAGTGATGCAGCAAGAGT
TCAGCACGATCTGCGATTATCAGAACAACTACATCGGCAGTCTCCCGAAT
TACCCCGTCTACTACGCCATGTTGAAGGCCTTTACCTTGGGCAACACCAG
CGCCCTGGCCACTGAGGTCCAGTCGATGAAGAATTCCTGTAATGATGTGA
CCGCCTTGTCGTCATTCTCCGAAAACCACGATGTCGCGCGATTTGCCAGC
ATGACCCATGACATGGCTCTCGCGAAGAATATTCTCACATTCACTCTTCT
CTTTGACGGTGTTCCCATGATCTATCAAGGTCAAGAGCAGCATCTCGACG
GCCCCGGCAGTCCGGAAAACCGAGAAGCGATATGGCTCTCTGAGTACAAC
ACCGACGCCGAGCTCTACAAGTTGATCGGCAAGTTGAACGCCATCCGGAA
GCACGCCTACCGACTCGACAATCACTACCCCGATGTCGAGACGTACCCCA
TCTTCGAAGGTGGCAGTGAACTGGGATTCCGCAAGGGAATCGAAGGCCGA
CAGGTGGTCATGCTTCTGTCCACGCAAGGCACGAACAGCAGCGCTTACAA
CCTCTCGATGCCGGTGAGTTTCATGGGTGGCACAGTAGTGACCGAGATTC
TGAACTGCGTCAACTACACGGTCAACGCCCAGAGCGAACTCGTGGTTCCG
ATGGATAAAGGAGAGCCGCGCGTGTTCTTCCCGGCGGATCTGATGCCCGG
CAGTGGGCTGTGCGGACTTCCTGTCGCGAATGTCACCTATGCTGCCTTGA
GGACGCAGGGCGCAGCGGCGGCGGAGGCTGCCTTGTCGCTAGGTATCAAG
ACTGATGCAGCTTCTAGTGCTTTGCTTTCTCTGGGGCTGTCTGTGGTGGC
GGGTCTGATTGTGGGGATGTGGTAAATGGTCTCAATGTCGGCCCTGCGAC
ACGGGCTTGGGGTCCTCTATCTTGCTAGCTGGCTGGGGTCGTCGCTGGCT
GCCAGCACCGAGCAATGGAAGTCCCGGTCAATCTATCAGACCATGACGGA
TCGGTTCGCGCGCACTGATGGCTCAACCACCTCCCCCTGCAACACCACGG
AGGGTCTGTACTGTGGTGGTACCTGGCGCGGCATGATCAACCATCTAGAT
TACATCCAGGGGATGGGCTTTGATGCCGTCATGATCTCCCCTATCATCGA
GAACGTCGAAGGTCGCGTGGAGTACGGAGAAGCCTATCACGGCTATTGGC
CCTTGGATCTGTACTCCCTCAACTCGCACTTTGGAACGCACCAGGATCTA
CTGGACCTGAGTGATGCCCTGCATGCTCGCGACATGTATCTGATGATGGA
CACGGTCATCAACAACATGGCCTACATCACCAATGGCTCCGACCCCGCCA
CCCACATCGACTACTCAACCCTGACCCCCTTCAACAGCTCGTCTTACTAC
CATCCGTACTGTAAGATCACCGACTGGAATAACTTCACCAATGCCCAGCT
GTGCCAAACCGGTGACAACATCGTGGCCTTGCCCGATCTGTATACCGAGC
ATGCCGAGGTGCAAGAAACCCTGAGCAACTGGGCCAAGGAAGTCATCTCC
ACCTATTCCATCGACGGCCTCCGCATCGATGCAGCAAAACATGTGAACCC
CGGCTTCCTGAAGAATTTCGGCGATGCGCTAGATATCTTCATGACCGGCG
AAGTGATGCAGCAAGAGTTCAGCACGATCTGCGATTATCAGAACAACTAC
ATCGGCAGTCTCCCGAATTACCCCGTCTACTACGCCATGTTGAAGGCCTT
TACCTTGGGCAACACCAGCGCCCTGGCCACTGAGGTCCAGTCGATGAAGA
ATTCCTGTAATGATGTGACCGCCTTGTCGTCATTCTCCGAAAACCACGAT
GTCGCGCGATTTGCCAGCATGACCCATGACATGGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004556alpha-amylase activity
GO:0003824catalytic activity
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007239ATCC10864_007239Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007239-T1ATCC10864_007239-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007239-T1.cdsATCC10864_007239-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007239-T1.exon2ATCC10864_007239-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007239-T1.exon1ATCC10864_007239-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF09260
InterProIPR013777
PFAMPF00128
InterProIPR017853
InterProIPR015340
InterProIPR006047
InterProIPR013780
Properties
Property NameValue
NoteSECRETED:SignalP(1-25)
NoteCAZy:GH13
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000172supercontigMCQH01000172:499027..500751 -
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