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ATCC10864_007243-T1, ATCC10864_007243-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007243-T1
Unique NameATCC10864_007243-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000173:15584..17020-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007243-T1 ID=ATCC10864_007243-T1|Name=ATCC10864_007243-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1437bp|location=Sequence derived from alignment at MCQH01000173:15584..17020- (Aspergillus niger ATCC 10864)
ATGTCGAAGCTTGGAAAGTAAGCGGAAACTCCCCACCCCCAAAAAACCAG
GGCCACGAAGCGACAAAAAAGAAGAAAAAGAAAGAAAGAAAATCTGACCA
GGACCTTTTTCCACTTTCCAGCCGCGCCGACTGGGCCGACGACGAGGAGT
TCGACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGAT
GGCACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGT
GAAGGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACC
CGCAGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGC
AACGCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGT
TTTCCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGA
ACGGTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTC
AAGTGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAA
GGATACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTG
ATGAGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTAC
GTGCCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGC
TGGCAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAACGTGA
GTTTTCCCATCCCCTCCTTGTTTTGATTTACTGTTCTGTGTTTGGCTATT
TGCTGGTCTCCCCGGAGGGGTTGGGGGAGGGGTCGAGGGACAGGGGATGC
TAGTTTTCCTCTTTCTGTCTCTTTCTCTCCTCCTTTCCCTTGCCTGCTCT
GCCCTCCCTTTGCCCTCTAAACACTCCTATTGGTGTCGTTCAGAGGGAGA
AAGAAAGAGGCAGCAGCCCTTTCGGGCAGACACATGGATGTCATGAGAAC
AGCAATCAGCTTCCTCTAATTTCCTTGCTTCTATTGCATTTGCTTCCCAC
GGACACATCACTGACTGACAATAAACCCAAACAGGTGAGCGAGTTGGCAG
AGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGTGTCACCAGA
GTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGCTTCGCTTT
CATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCGAGAAGATGG
ATGGCTGTAAGTTATCCCTCCCGGTTACGTTTCCATTTTTCGTCATATTC
TGTTTTGTTTTTTTCCGCCATCGTTGCAATGTCAGCAGCAAAGCAAGTTA
TCGGAATCGCAACTAACATTTCCTCTTCATCTAGTCGGTTACCGTCACCT
TATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTTAG
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Coding sequence (CDS) from alignment at MCQH01000173:15584..17020-

>ATCC10864_007243-T1 ID=ATCC10864_007243-T1|Name=ATCC10864_007243-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3468bp|location=Sequence derived from alignment at MCQH01000173:15584..17020- (Aspergillus niger ATCC 10864)
TCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCACT
TAGGTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAACG
CTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGA
GAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGCA
CGTGCTTGCGAGAAGATGGATGGCTCCGCGCCGACTGGGCCGACGACGAG
GAGTTCGACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACAA
AGATGGCACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAGA
AGGTGAAGGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGTC
AACCCGCAGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAA
GGGCAACGCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAACA
TTGTTTTCCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAG
AAGAACGGTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAA
GGTCAAGTGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCT
TCAAGGATACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCT
GGTGATGAGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAG
CTACGTGCCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAA
TGGCTGGCAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAAC
ATGTCGAAGCTTGGAAATCGGTTACCGTCACCTTATCCTGCGCGTCGAAT
TCGCCAAGCGTGCCACTTAGGTGAGCGAGTTGGCAGAGGAAGGAGAACTG
CGGGATCTGTTCGAACGCTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAG
AGACAGAGAAACCCAGAGAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGG
ATCGGAGCGATGCTGCACGTGCTTGCGAGAAGATGGATGGCTCCGCGCCG
ACTGGGCCGACGACGAGGAGTTCGACGACCCCTCCGCTCTCCCCCCGCAG
CAAATCACGACCAACAAAGATGGCACGAAGACGATCGTCTCCTACCGATT
CAACGACGAAGGCAAGAAGGTGAAGGTGACCCGCCGGATCAAAACGACCG
TTGTGCGCGAACATGTCAACCCGCAGGTCGCGGAGCGGAGGTCCTGGGCC
AAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGACCTTCGTTCGATACGAC
CTCCGTGGGTGAGAACATTGTTTTCCGGCCCAGCGTCAACTGGAAGCTTC
AGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGAAGGGCAGTGTGAAGGAT
CAGCTGAAGGACAAGAAGGTCAAGTGTCGTATTTGCAGTGGCGAGCACTT
TACTGCTCGCTGTCCCTTCAAGGATACTATGGCTCCTGTCGACGAGCCCA
CTGCTGGTGGAGAGGCTGGTGATGAGGATTCTCCGGCTGCTGGCGCTTTG
GGTGCTGGTACTTCTAGCTACGTGCCCCCTCATCTGCGGAAGGGTGCTGC
TGGTGGCGGAGAGAGAATGGCTGGCAAGTATGAGAAGGATGATTTGGCGA
CTCTGAGAGTTACGAACATGTCGAAGCTTGGAAATCGGTTACCGTCACCT
TATCCTGCGCGTCGAATTCGCCAAGCGTGCCACTTAGGTGAGCGAGTTGG
CAGAGGAAGGAGAACTGCGGGATCTGTTCGAACGCTTCGGTCGTGTCACC
AGAGTCTTCCTTGCCAGAGACAGAGAAACCCAGAGAGCCAAGGGCTTCGC
TTTCATCAGCTTTGCGGATCGGAGCGATGCTGCACGTGCTTGCGAGAAGA
TGGATGGCTCCGCGCCGACTGGGCCGACGACGAGGAGTTCGACGACCCCT
CCGCTCTCCCCCCGCAGCAAATCACGACCAACAAAGATGGCACGAAGACG
ATCGTCTCCTACCGATTCAACGACGAAGGCAAGAAGGTGAAGGTGACCCG
CCGGATCAAAACGACCGTTGTGCGCGAACATGTCAACCCGCAGGTCGCGG
AGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGAAGGGCAACGCGCCCGGA
CCTTCGTTCGATACGACCTCCGTGGGTGAGAACATTGTTTTCCGGCCCAG
CGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGAGAAGAACGGTGGCGAGA
AGGGCAGTGTGAAGGATCAGCTGAAGGACAAGAAGGTCAAGTGTCGTATT
TGCAGTGGCGAGCACTTTACTGCTCGCTGTCCCTTCAAGGATACTATGGC
TCCTGTCGACGAGCCCACTGCTGGTGGAGAGGCTGGTGATGAGGATTCTC
CGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTAGCTACGTGCCCCCTCAT
CTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGAATGGCTGGCAAGTATGA
GAAGGATGATTTGGCGACTCTGAGAGTTACGAACATGTCGAAGCTTGGAA
ATCGGTTACCGTCACCTTATCCTGCGCGTCGAATTCGCCAAGCGTGCCAC
TTAGGTGAGCGAGTTGGCAGAGGAAGGAGAACTGCGGGATCTGTTCGAAC
GCTTCGGTCGTGTCACCAGAGTCTTCCTTGCCAGAGACAGAGAAACCCAG
AGAGCCAAGGGCTTCGCTTTCATCAGCTTTGCGGATCGGAGCGATGCTGC
ACGTGCTTGCGAGAAGATGGATGGCTCCGCGCCGACTGGGCCGACGACGA
GGAGTTCGACGACCCCTCCGCTCTCCCCCCGCAGCAAATCACGACCAACA
AAGATGGCACGAAGACGATCGTCTCCTACCGATTCAACGACGAAGGCAAG
AAGGTGAAGGTGACCCGCCGGATCAAAACGACCGTTGTGCGCGAACATGT
CAACCCGCAGGTCGCGGAGCGGAGGTCCTGGGCCAAGTTCGGTCTGGAGA
AGGGCAACGCGCCCGGACCTTCGTTCGATACGACCTCCGTGGGTGAGAAC
ATTGTTTTCCGGCCCAGCGTCAACTGGAAGCTTCAGGCGGCTGAGGCGGA
GAAGAACGGTGGCGAGAAGGGCAGTGTGAAGGATCAGCTGAAGGACAAGA
AGGTCAAGTGTCGTATTTGCAGTGGCGAGCACTTTACTGCTCGCTGTCCC
TTCAAGGATACTATGGCTCCTGTCGACGAGCCCACTGCTGGTGGAGAGGC
TGGTGATGAGGATTCTCCGGCTGCTGGCGCTTTGGGTGCTGGTACTTCTA
GCTACGTGCCCCCTCATCTGCGGAAGGGTGCTGCTGGTGGCGGAGAGAGA
ATGGCTGGCAAGTATGAGAAGGATGATTTGGCGACTCTGAGAGTTACGAA
CATGTCGAAGCTTGGAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF35ATCC10864_007243Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007243-T1ATCC10864_007243-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007243-T1.cdsATCC10864_007243-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007243-T1.exon4ATCC10864_007243-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007243-T1.exon3ATCC10864_007243-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007243-T1.exon2ATCC10864_007243-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007243-T1.exon1ATCC10864_007243-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012677
PFAMPF12353
InterProIPR024675
PFAMPF00076
InterProIPR000504
InterProIPR035979
InterProIPR034240
InterProIPR017334
Properties
Property NameValue
NoteBUSCO:EOG0926489S
Producttranslation initiation factor eIF3 subunit g
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000173supercontigMCQH01000173:15584..17020 -
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