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ATCC10864_007254-T1, ATCC10864_007254-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007254-T1
Unique NameATCC10864_007254-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000173:41821..42813+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007254-T1 ID=ATCC10864_007254-T1|Name=ATCC10864_007254-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=993bp|location=Sequence derived from alignment at MCQH01000173:41821..42813+ (Aspergillus niger ATCC 10864)
ATGCTTCCATCAGCAGCGCCCTACCTACTACGACCTACTAGTAACCGTGC
CGCTTTGCGCCGGCTACAACTACAGCACATCGGTCTTCTTCCCCGCAGCA
CAACAACAATCACAGGAACAACAGCATCATCATCACTAGTACGAAAATAT
GCCACAACGCAAGGCGCCGCCCCGAAACGGCGAAACGTGACTGTTCTATC
GGACGATGGACGATACGAGTGGGGAGAATTGAGCGGGAGGGAGAAAGTTG
CGAGGGCGACGCAGCAGTCGGTGAATTTCGTGGTGATTATTGCGGGGGCG
GTTTTGACGGTTCGTTCAAGCTATATATAATCCGGACCGTTGGGGTGTGA
TTGCTGATGTGTGTTATTGAGTAGGGCGGGGTCTTCTACCTTCTCTTCAC
GGAGGTCTTTTCCCCGAATAGCAAGACATGGCAGTTTGAAAAAGCTGTCG
AGCGCATCAAGGATGATGTTCGGTGTACGAACCTCCTGGGTGATCGGAGG
GAGATCAAGGCTTATGGGGAGAATACGTGGAGTAGATGGGCGAGGAATAG
GCCTATTGCGTACGTTAATTTTCTTTGCCATTGTCTACTGGTGTGAGGGA
ACGGGGTGATGCTGACTGGGATATAGGACGTCTGTCTATCAGGACAGAGT
GGGTCGGGAACACCTGAAGATGAACTTCCACGTATGCGATGCTCTCTTCT
TCCTCTGGGTTGTGTGTGGTATACTGATTGGTTGGTGATATAGGTCGAAG
GTCCTCTTAATTCCGGAACCGTGTTTGTGCACATGATGAAGCCGTTGAAT
GAGCATCACTGGGAGTATCAGCTTCTTGCTTTGGAAGTGCCGGGTTAGTT
TGATCCATATAGCACCCTTTGCTTCAGTTATCCTTGGGGTTGGACTGACT
TGTGTAGGACATTCCCGGGTTGTGCTTGAAGAAGCGCGCGAGAAGCCTGG
CGTTGGGCAAGCACTGAAGATCTTTGGCATTAAGTGGCGGTAG
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Coding sequence (CDS) from alignment at MCQH01000173:41821..42813+

>ATCC10864_007254-T1 ID=ATCC10864_007254-T1|Name=ATCC10864_007254-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3675bp|location=Sequence derived from alignment at MCQH01000173:41821..42813+ (Aspergillus niger ATCC 10864)
ATGCTTCCATCAGCAGCGCCCTACCTACTACGACCTACTAGTAACCGTGC
CGCTTTGCGCCGGCTACAACTACAGCACATCGGTCTTCTTCCCCGCAGCA
CAACAACAATCACAGGAACAACAGCATCATCATCACTAGTACGAAAATAT
GCCACAACGCAAGGCGCCGCCCCGAAACGGCGAAACGTGACTGTTCTATC
GGACGATGGACGATACGAGTGGGGAGAATTGAGCGGGAGGGAGAAAGTTG
CGAGGGCGACGCAGCAGTCGGTGAATTTCGTGGTGATTATTGCGGGGGCG
GTTTTGACGGGCGGGGTCTTCTACCTTCTCTTCACGGAGGTCTTTTCCCC
GAATAGCAAGACATGGCAGTTTGAAAAAGCTGTCGAGCGCATCAAGGATG
ATGTTCGGTGTACGAACCTCCTGGGTGATCGGAGGGAGATCAAGGCTTAT
GGGGAGAATACGTGGAGTAGATGGGCGAGGAATAGGCCTATTGCGACGTC
TGTCTATCAGGACAGAGTGGGTCGGGAACACCTGAAGATGAACTTCCACG
TCGAAGGTCCTCTTAATTCCGGAACCGTGTTTGTGCACATGATGAAGCCG
TTGAATGAGCATCACTGGGAGTATCAGCTTCTTGCTTTGGAAGTGCCGGG
ACATTCCCGGGTTGTGCTTGAAGAAGCGCGCGAGAAGCCTGGCGTTGGGC
AAGCACTGAAGATCTTTGGCATTAAGTGGCGGTAGATGCTTCCATCAGCA
GCGCCCTACCTACTACGACCTACTAGTAACCGTGCCGCTTTGCGCCGGCT
ACAACTACAGCACATCGGTCTTCTTCCCCGCAGCACAACAACAATCACAG
GAACAACAGCATCATCATCACTAGTACGAAAATATGCCACAACGCAAGGC
GCCGCCCCGAAACGGCGAAACGTGACTGTTCTATCGGACGATGGACGATA
CGAGTGGGGAGAATTGAGCGGGAGGGAGAAAGTTGCGAGGGCGACGCAGC
AGTCGGTGAATTTCGTGGTGATTATTGCGGGGGCGGTTTTGACGGGCGGG
GTCTTCTACCTTCTCTTCACGGAGGTCTTTTCCCCGAATAGCAAGACATG
GCAGTTTGAAAAAGCTGTCGAGCGCATCAAGGATGATGTTCGGTGTACGA
ACCTCCTGGGTGATCGGAGGGAGATCAAGGCTTATGGGGAGAATACGTGG
AGTAGATGGGCGAGGAATAGGCCTATTGCGACGTCTGTCTATCAGGACAG
AGTGGGTCGGGAACACCTGAAGATGAACTTCCACGTCGAAGGTCCTCTTA
ATTCCGGAACCGTGTTTGTGCACATGATGAAGCCGTTGAATGAGCATCAC
TGGGAGTATCAGCTTCTTGCTTTGGAAGTGCCGGGACATTCCCGGGTTGT
GCTTGAAGAAGCGCGCGAGAAGCCTGGCGTTGGGCAAGCACTGAAGATCT
TTGGCATTAAGTGGCGGTAGATGCTTCCATCAGCAGCGCCCTACCTACTA
CGACCTACTAGTAACCGTGCCGCTTTGCGCCGGCTACAACTACAGCACAT
CGGTCTTCTTCCCCGCAGCACAACAACAATCACAGGAACAACAGCATCAT
CATCACTAGTACGAAAATATGCCACAACGCAAGGCGCCGCCCCGAAACGG
CGAAACGTGACTGTTCTATCGGACGATGGACGATACGAGTGGGGAGAATT
GAGCGGGAGGGAGAAAGTTGCGAGGGCGACGCAGCAGTCGGTGAATTTCG
TGGTGATTATTGCGGGGGCGGTTTTGACGGGCGGGGTCTTCTACCTTCTC
TTCACGGAGGTCTTTTCCCCGAATAGCAAGACATGGCAGTTTGAAAAAGC
TGTCGAGCGCATCAAGGATGATGTTCGGTGTACGAACCTCCTGGGTGATC
GGAGGGAGATCAAGGCTTATGGGGAGAATACGTGGAGTAGATGGGCGAGG
AATAGGCCTATTGCGACGTCTGTCTATCAGGACAGAGTGGGTCGGGAACA
CCTGAAGATGAACTTCCACGTCGAAGGTCCTCTTAATTCCGGAACCGTGT
TTGTGCACATGATGAAGCCGTTGAATGAGCATCACTGGGAGTATCAGCTT
CTTGCTTTGGAAGTGCCGGGACATTCCCGGGTTGTGCTTGAAGAAGCGCG
CGAGAAGCCTGGCGTTGGGCAAGCACTGAAGATCTTTGGCATTAAGTGGC
GGTAGATGCTTCCATCAGCAGCGCCCTACCTACTACGACCTACTAGTAAC
CGTGCCGCTTTGCGCCGGCTACAACTACAGCACATCGGTCTTCTTCCCCG
CAGCACAACAACAATCACAGGAACAACAGCATCATCATCACTAGTACGAA
AATATGCCACAACGCAAGGCGCCGCCCCGAAACGGCGAAACGTGACTGTT
CTATCGGACGATGGACGATACGAGTGGGGAGAATTGAGCGGGAGGGAGAA
AGTTGCGAGGGCGACGCAGCAGTCGGTGAATTTCGTGGTGATTATTGCGG
GGGCGGTTTTGACGGGCGGGGTCTTCTACCTTCTCTTCACGGAGGTCTTT
TCCCCGAATAGCAAGACATGGCAGTTTGAAAAAGCTGTCGAGCGCATCAA
GGATGATGTTCGGTGTACGAACCTCCTGGGTGATCGGAGGGAGATCAAGG
CTTATGGGGAGAATACGTGGAGTAGATGGGCGAGGAATAGGCCTATTGCG
ACGTCTGTCTATCAGGACAGAGTGGGTCGGGAACACCTGAAGATGAACTT
CCACGTCGAAGGTCCTCTTAATTCCGGAACCGTGTTTGTGCACATGATGA
AGCCGTTGAATGAGCATCACTGGGAGTATCAGCTTCTTGCTTTGGAAGTG
CCGGGACATTCCCGGGTTGTGCTTGAAGAAGCGCGCGAGAAGCCTGGCGT
TGGGCAAGCACTGAAGATCTTTGGCATTAAGTGGCGGTAGATGCTTCCAT
CAGCAGCGCCCTACCTACTACGACCTACTAGTAACCGTGCCGCTTTGCGC
CGGCTACAACTACAGCACATCGGTCTTCTTCCCCGCAGCACAACAACAAT
CACAGGAACAACAGCATCATCATCACTAGTACGAAAATATGCCACAACGC
AAGGCGCCGCCCCGAAACGGCGAAACGTGACTGTTCTATCGGACGATGGA
CGATACGAGTGGGGAGAATTGAGCGGGAGGGAGAAAGTTGCGAGGGCGAC
GCAGCAGTCGGTGAATTTCGTGGTGATTATTGCGGGGGCGGTTTTGACGG
GCGGGGTCTTCTACCTTCTCTTCACGGAGGTCTTTTCCCCGAATAGCAAG
ACATGGCAGTTTGAAAAAGCTGTCGAGCGCATCAAGGATGATGTTCGGTG
TACGAACCTCCTGGGTGATCGGAGGGAGATCAAGGCTTATGGGGAGAATA
CGTGGAGTAGATGGGCGAGGAATAGGCCTATTGCGACGTCTGTCTATCAG
GACAGAGTGGGTCGGGAACACCTGAAGATGAACTTCCACGTCGAAGGTCC
TCTTAATTCCGGAACCGTGTTTGTGCACATGATGAAGCCGTTGAATGAGC
ATCACTGGGAGTATCAGCTTCTTGCTTTGGAAGTGCCGGGACATTCCCGG
GTTGTGCTTGAAGAAGCGCGCGAGAAGCCTGGCGTTGGGCAAGCACTGAA
GATCTTTGGCATTAAGTGGCGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
Vocabulary: Cellular Component
TermDefinition
GO:0005744TIM23 mitochondrial import inner membrane translocase complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM21ATCC10864_007254Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007254-T1ATCC10864_007254-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007254-T1.exon1ATCC10864_007254-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007254-T1.exon2ATCC10864_007254-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007254-T1.exon3ATCC10864_007254-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007254-T1.exon4ATCC10864_007254-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007254-T1.exon5ATCC10864_007254-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007254-T1.cdsATCC10864_007254-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08695
InterProIPR013261
InterProIPR038552
PFAMPF08294
Properties
Property NameValue
Productmitochondrial import inner membrane translocase subunit tim21
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000173supercontigMCQH01000173:41821..42813 +
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