You are here

Home

ATCC10864_007288-T1, ATCC10864_007288-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007288-T1
Unique NameATCC10864_007288-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000173:136197..136536+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007288-T1 ID=ATCC10864_007288-T1|Name=ATCC10864_007288-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=340bp|location=Sequence derived from alignment at MCQH01000173:136197..136536+ (Aspergillus niger ATCC 10864)
ATGGTCCGCCTCATGACTCTCGGACTTTTCCTCATCAGCGCCCTCACCGC
GCAGGCCTGCACATACTGCCAGTGCGAGTTCAGCGACAGCAGTCACTGCT
GCGTATACTCGGTAAGCACCCACCCATGCAGCATTACAGTACCCAAGAAG
TTAATAAATTCACCCAAAGGATGCAACCATCGGAGAACTAGACTGTACCA
GCATCTGCGCCAAAGCTCATCGGGCCGACGGCGTTAGCAACGCGGACGGC
ACAGCCGGTACTGCGTGCAATGCCGGGGGCAAGTATGAATGTATTAGTGC
TATCACGGCGCAGGGTCGGACACCTTGCTACACTGAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000173:136197..136536+

>ATCC10864_007288-T1 ID=ATCC10864_007288-T1|Name=ATCC10864_007288-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=564bp|location=Sequence derived from alignment at MCQH01000173:136197..136536+ (Aspergillus niger ATCC 10864)
ATGGTCCGCCTCATGACTCTCGGACTTTTCCTCATCAGCGCCCTCACCGC
GCAGGCCTGCACATACTGCCAGTGCGAGTTCAGCGACAGCAGTCACTGCT
GCGTATACTCGGATGCAACCATCGGAGAACTAGACTGTACCAGCATCTGC
GCCAAAGCTCATCGGGCCGACGGCGTTAGCAACGCGGACGGCACAGCCGG
TACTGCGTGCAATGCCGGGGGCAAGTATGAATGTATTAGTGCTATCACGG
CGCAGGGTCGGACACCTTGCTACACTGAGTGAATGGTCCGCCTCATGACT
CTCGGACTTTTCCTCATCAGCGCCCTCACCGCGCAGGCCTGCACATACTG
CCAGTGCGAGTTCAGCGACAGCAGTCACTGCTGCGTATACTCGGATGCAA
CCATCGGAGAACTAGACTGTACCAGCATCTGCGCCAAAGCTCATCGGGCC
GACGGCGTTAGCAACGCGGACGGCACAGCCGGTACTGCGTGCAATGCCGG
GGGCAAGTATGAATGTATTAGTGCTATCACGGCGCAGGGTCGGACACCTT
GCTACACTGAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007288ATCC10864_007288Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007288-T1.exon1ATCC10864_007288-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007288-T1.exon2ATCC10864_007288-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007288-T1.cdsATCC10864_007288-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007288-T1ATCC10864_007288-T1-proteinAspergillus niger ATCC 10864polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000173supercontigMCQH01000173:136197..136536 +
Powered by Drupal