You are here

ATCC10864_007380-T1, ATCC10864_007380-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007380-T1
Unique NameATCC10864_007380-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:191346..192381-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007380-T1 ID=ATCC10864_007380-T1|Name=ATCC10864_007380-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1036bp|location=Sequence derived from alignment at MCQH01000184:191346..192381- (Aspergillus niger ATCC 10864)
ATGCATGAGCATGAAATGTCCTACATGGGCCCTCGGGGTATGATCCCTTC CTACCTTCATAGCCACAATCTCCCCATAAACTAACGGCACCGATACCGAA GCCTTCAGTCACGATCAGAGCCAAGATGCAGAGGCTGAATATGACCGACT CCGCAACCTAGCCCGACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAAC GGGTACGCCATTGACAACCACTGCCGCAACCACCCAACCGCTCGCCAAAT TAGAGAAAGAAACAAACAACTAACCAATATTTAATGGTCAGTCTCAAGAA GCCTACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTCGGAACAAGG CAAAGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAGCGTCGGAGT TCATCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCAGACACCATC GATCTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCTCGAGGAGAG GATTAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATGTGTAAGCTT CCCTTTCACGTTACTCTCACACACACTGGCTTCTTCTTTACCCTCGACAC TGATCGCTAATTGTTACAATTTTCCCCAATCAATAGAATTGTCGGCAAGG GCAACCACTCCGCCAATCATATCCAGAAAATCAAGCCCCGAGTAGAGCAA GTCTGCCAGGAACTCGGTCTCCAGTACGCGACTGAGGAGAACGCAGGGCG CATTTATGTGAATCTGACTGGTGGACCGGCGGATATGGAGACTGCGCCAA CGCCCAATCATCCTCACTATCAGCAATACCCTCAGCATCAACAGCATCCG TCGGGTACCTATGCTCACCCGCATCAGCAGCAGCAGCAGCAATATCCCGG TTCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAACAGGGTGCGGGCA ACCAGGATGAGATCGAGCAGGTGGTTAATGCGGTTCTGCCTAAGATTCTC AATAAGCTGGAGAAGGCTTGCTGTGTGGTCATGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000184:191346..192381-

>ATCC10864_007380-T1 ID=ATCC10864_007380-T1|Name=ATCC10864_007380-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3156bp|location=Sequence derived from alignment at MCQH01000184:191346..192381- (Aspergillus niger ATCC 10864)
AATTGTCGGCAAGGGCAACCACTCCGCCAATCATATCCAGAAAATCAAGC
CCCGAGTAGAGCAAGTCTGCCAGGAACTCGGTCTCCAGTACGCGACTGAG
GAGAACGCAGGGCGCATTTATGTGAATCTGACTGGTGGACCGGCGGATAT
GGAGACTGCGCCAACGCCCAATCATCCTCACTATCAGCAATACCCTCAGC
ATCAACAGCATCCGTCGGGTACCTATGCTCACCCGCATCAGCAGCAGCAG
CAGCAATATCCCGGTTCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACA
ACAGGGTGCGGGCAACCAGGATGAGATCGAGCAGGTGGTTAATGCGGTTC
TGCCTAAGATTCTCAATAAGCTGGAGAAGGCTTGCTGTGTGGTCATGTGA
TCTCAAGAAGCCTACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTC
GGAACAAGGCAAAGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAG
CGTCGGAGTTCATCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCA
GACACCATCGATCTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCT
CGAGGAGAGGATTAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATG
TCCTTCAGTCACGATCAGAGCCAAGATGCAGAGGCTGAATATGACCGACT
CCGCAACCTAGCCCGACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAAC
GGATGCATGAGCATGAAATGTCCTACATGGGCCCTCGGGAATTGTCGGCA
AGGGCAACCACTCCGCCAATCATATCCAGAAAATCAAGCCCCGAGTAGAG
CAAGTCTGCCAGGAACTCGGTCTCCAGTACGCGACTGAGGAGAACGCAGG
GCGCATTTATGTGAATCTGACTGGTGGACCGGCGGATATGGAGACTGCGC
CAACGCCCAATCATCCTCACTATCAGCAATACCCTCAGCATCAACAGCAT
CCGTCGGGTACCTATGCTCACCCGCATCAGCAGCAGCAGCAGCAATATCC
CGGTTCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAACAGGGTGCGG
GCAACCAGGATGAGATCGAGCAGGTGGTTAATGCGGTTCTGCCTAAGATT
CTCAATAAGCTGGAGAAGGCTTGCTGTGTGGTCATGTGATCTCAAGAAGC
CTACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTCGGAACAAGGCA
AAGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAGCGTCGGAGTTC
ATCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCAGACACCATCGA
TCTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCTCGAGGAGAGGA
TTAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATGTCCTTCAGTCA
CGATCAGAGCCAAGATGCAGAGGCTGAATATGACCGACTCCGCAACCTAG
CCCGACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAACGGATGCATGAG
CATGAAATGTCCTACATGGGCCCTCGGGAATTGTCGGCAAGGGCAACCAC
TCCGCCAATCATATCCAGAAAATCAAGCCCCGAGTAGAGCAAGTCTGCCA
GGAACTCGGTCTCCAGTACGCGACTGAGGAGAACGCAGGGCGCATTTATG
TGAATCTGACTGGTGGACCGGCGGATATGGAGACTGCGCCAACGCCCAAT
CATCCTCACTATCAGCAATACCCTCAGCATCAACAGCATCCGTCGGGTAC
CTATGCTCACCCGCATCAGCAGCAGCAGCAGCAATATCCCGGTTCGCAAC
AGCAGCAGCAACAGCAGCAGCAGCAACAACAGGGTGCGGGCAACCAGGAT
GAGATCGAGCAGGTGGTTAATGCGGTTCTGCCTAAGATTCTCAATAAGCT
GGAGAAGGCTTGCTGTGTGGTCATGTGATCTCAAGAAGCCTACTCCAGCG
GCGATGGCGCCAAGGCCAAAGAACTCTCGGAACAAGGCAAAGCCCACGGT
CGCAAGATGGAAGAATACAACAAGCAAGCGTCGGAGTTCATCTTCCGCGA
GAACAACGCCAACGGGCGTGTTGCGGCAGACACCATCGATCTGCACGGAC
AATTCGTCGAAGAGGCTGAGGAGATTCTCGAGGAGAGGATTAAATATGCG
AAAGCGCACGGTCAGGATCATCTCCATGTCCTTCAGTCACGATCAGAGCC
AAGATGCAGAGGCTGAATATGACCGACTCCGCAACCTAGCCCGACAAGAA
GCTTCAAAGCGCAACTCATGTTTCCAACGGATGCATGAGCATGAAATGTC
CTACATGGGCCCTCGGGAATTGTCGGCAAGGGCAACCACTCCGCCAATCA
TATCCAGAAAATCAAGCCCCGAGTAGAGCAAGTCTGCCAGGAACTCGGTC
TCCAGTACGCGACTGAGGAGAACGCAGGGCGCATTTATGTGAATCTGACT
GGTGGACCGGCGGATATGGAGACTGCGCCAACGCCCAATCATCCTCACTA
TCAGCAATACCCTCAGCATCAACAGCATCCGTCGGGTACCTATGCTCACC
CGCATCAGCAGCAGCAGCAGCAATATCCCGGTTCGCAACAGCAGCAGCAA
CAGCAGCAGCAGCAACAACAGGGTGCGGGCAACCAGGATGAGATCGAGCA
GGTGGTTAATGCGGTTCTGCCTAAGATTCTCAATAAGCTGGAGAAGGCTT
GCTGTGTGGTCATGTGATCTCAAGAAGCCTACTCCAGCGGCGATGGCGCC
AAGGCCAAAGAACTCTCGGAACAAGGCAAAGCCCACGGTCGCAAGATGGA
AGAATACAACAAGCAAGCGTCGGAGTTCATCTTCCGCGAGAACAACGCCA
ACGGGCGTGTTGCGGCAGACACCATCGATCTGCACGGACAATTCGTCGAA
GAGGCTGAGGAGATTCTCGAGGAGAGGATTAAATATGCGAAAGCGCACGG
TCAGGATCATCTCCATGTCCTTCAGTCACGATCAGAGCCAAGATGCAGAG
GCTGAATATGACCGACTCCGCAACCTAGCCCGACAAGAAGCTTCAAAGCG
CAACTCATGTTTCCAACGGATGCATGAGCATGAAATGTCCTACATGGGCC
CTCGGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007380ATCC10864_007380Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007380-T1ATCC10864_007380-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007380-T1.cdsATCC10864_007380-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007380-T1.exon4ATCC10864_007380-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007380-T1.exon3ATCC10864_007380-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007380-T1.exon2ATCC10864_007380-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007380-T1.exon1ATCC10864_007380-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08590
InterProIPR002625
InterProIPR013899
PFAMPF01713
InterProIPR036063
Properties
Property NameValue
NoteantiSMASH:Cluster_1000184.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:191346..192381 -