You are here

Home

ATCC10864_007779-T1, ATCC10864_007779-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007779-T1
Unique NameATCC10864_007779-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:1307683..1309762-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007779-T1 ID=ATCC10864_007779-T1|Name=ATCC10864_007779-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2080bp|location=Sequence derived from alignment at MCQH01000184:1307683..1309762- (Aspergillus niger ATCC 10864)
ATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGTATGTCTTGTTCTT
ATATTACTAACTGGCCCTTTCACCTATCTATCCCTTCAGTCAAACCCCCA
AAGGTCATTTAATGTTTCCCCTCCGCAGAGATCCTTCCCCGCACCTCATC
TCAAACCAACTCCAACTCACATATCTTCACCTCCAATAGCGTCACCGACC
TCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTG
CAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCG
CTTCGTAAGTCCGCTTCATCTCCCCCATCCTATAGATTCTCTGAACGGGA
AACTTACTCTGTATCCAGGAACAACATGAAATCCCCGGTAGTAGGGGCGA
GGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGGTGGGTTGACTTCTCC
TTTCTAACTTCATTCTCGCAACTGAGAATACTGAAACATCGGGATGATGT
GTAAACTAATATTGATTGGTACTAGAAAACCCACTCTGCCTCTATCACTG
CCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTG
ATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGT
AAGTGGTTAAATCGTCCTTTTCTTTTTCTTTCTCCTTCTTTTGAGACTTT
TGTGGTTCTTTACAGTGCTCTTTGTTGGGTTACCAAGGGATAGCAGCAGC
TAACGACTTATCAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACT
CCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGA
GAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGGTCGGAA
GGGCATAAGGGACGGAAATCACAAGTGTTTCTTGTATTATCATTTAATGA
GAAATGGAGTGTAGTTTAGCCTGTGTAAGCGACGATAGAGCCTAAGATTT
CTTTGATGCTGTGTATGGCTGTACAGGATTAGGATGGGGATGGAAAACTA
TGCCTATTTTAAACCACCTGATCTGAACAAGGTTTCAGGCCCGGATATTG
CCATATACAGCGAAATACCACCTCCAGAGAGAGAAAGAGAGCAACTGACC
CGGTGGGTGCACATTGAAGCTGATGAAATGCGGAGCGATATTGCAGTACT
CACAAGGCGGTGTCTTTGTGCAGCTTGTGATTGGGTGATACCCGCGTCTG
GCGGCATCACATTTTCGCGGACGGCATCAGCTCCGTCAAGTTGGCTCTGC
GATCTCCGATAGACTGCCCAGCTCTTTTACAGCACGCGATCAACTCAATT
TCACCTGGACGTGGAGACGGTCATTTTTTATTTCCATCATTACACGATTC
CTTTGGCGCGTCCATCTCCATCGACATCCATATTTTGCAAACTCCTGCTG
AGCAGCTGGCATTGATTTCAGACCACCAACCATGAGTGTTCGTACTCTCC
TATCCCTACTCCATTGACTCAAGCTTTATCTTCAGGCGTACACTTTTGTT
AATAAGGAGTAAACTGACTCTGCGAATCTAGTTCAACCCTGTCAACCCCC
GGCCTTTCCTCCAGGCTAGGTACGCACCCGGTCCCTTGTCGCTTGATCGC
CCCGCCGCAATCCTATCCTATAACTTCCAATTTCTATTGAAAAATATCCT
CTAATTCAAATCGCAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGG
GGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAA
CGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAA
CATTGGGTCTGGTCCTGATTAGGTGCGTTTACTCGGTCGCCTGATATCTC
GGGGGCTGGGGTTTCCTGATAGCAGTGCTGGGATCTGCGCATCCGTTACC
CCTCTTCGGAGATACACTTGGACGCATATTGGAAGGACATTTGCTAACGC
AATACGCTGATAGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGT
GTGGAAATGACGGACCTGGGACTACGATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000184:1307683..1309762-

>ATCC10864_007779-T1 ID=ATCC10864_007779-T1|Name=ATCC10864_007779-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5832bp|location=Sequence derived from alignment at MCQH01000184:1307683..1309762- (Aspergillus niger ATCC 10864)
GTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGG
ACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTG
GGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGA
ACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGA
ACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCGGCCTTTC
CTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCT
TTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAA
GGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAAAACCCACT
CTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGC
ACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTACCGA
GTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGA
ACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAA
GGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCT
CTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTT
TCCCTCCTCCTGTCTGCCGAACTCAGCGGGTGTAACAACATCCTCTGGAT
GGGCTCTGCGGACAGTGTGGAAATGACGGACCTGGGACTACGATAGAGTC
GGTACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGG
CAAGCTTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCGTGATACGG
AAGAGTTCATTGATGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATT
AGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGGGTGAGTGGG
AAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCA
GAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGAT
CAAGGAGATCAACTTTCAGAAAACCCACTCTGCCTCTATCACTGCCGGCC
CCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAG
ATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGAACAACA
TGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGC
TGTGCCAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTA
CTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCA
ACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGTCTGCCGAA
CTCAGCGGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGA
AATGACGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGT
CTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTC
GTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGA
ACACGGGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCC
GGCCTTTCCTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTT
CTACTCCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTAC
GATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAA
AACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATG
AGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAA
TTTACCGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGG
CGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTC
CGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCA
ATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCT
TCATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGTGTAACAACATC
CTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGGACCTGGGACTACG
ATAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAA
TACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCG
TGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAACATTGGGTCTGG
TCCTGATTAGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGGG
TGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTG
ATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAG
GTTTCGATCAAGGAGATCAACTTTCAGAAAACCCACTCTGCCTCTATCAC
TGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGG
TGATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGAT
GAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAA
ATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAA
GAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAAC
CCACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGT
CTGCCGAACTCAGCGGGTGTAACAACATCCTCTGGATGGGCTCTGCGGAC
AGTGTGGAAATGACGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCA
TCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGC
ATCGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGA
TGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGT
CAACCCCCGGCCTTTCCTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGC
TGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGT
ATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAAC
TTTCAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGA
GGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAG
GATTGGAATTTACCGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGT
AGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCA
CCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTC
AAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTT
CAACCGCTTCATGCTTTCCCTCCTCCTGTCTGCCGAACTCAGCGGGTGTA
ACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGACGGACCTG
GGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTCTGAAGTGGGGCC
AAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACATGAACGTG
CTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACGGGAACATT
GGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCGGCCTTTCCTCCA
GGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACTCCTTTCAC
CGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGAGAAGGCGG
GAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAAAACCCACTCTGCC
TCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAGCGCACTGC
GAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTACCGAGTTTA
AGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAGGCGAACTTT
GTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCCCAAGGACA
CCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCACCTCTTGT
CGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCATGCTTTCCCT
CCTCCTGTCTGCCGAACTCAGCGGGTGTAACAACATCCTCTGGATGGGCT
CTGCGGACAGTGTGGAAATGACGGACCTGGGACTACGATAGAGTCGGTAC
CGAGCTCATCATCCGTCTGAAGTGGGGCCAAACGGAATACAAGGGCAAGC
TTGAGAGCATCGATTCGTACATGAACGTGCTGCTCCGTGATACGGAAGAG
TTCATTGATGGAAAGAACACGGGAACATTGGGTCTGGTCCTGATTAGTTC
AACCCTGTCAACCCCCGGCCTTTCCTCCAGGCTAGGGTGAGTGGGAAGCG
AAGGGAGCTGAGTCTTCTACTCCTTTCACCGGCATTGATTTGTCAGAGGA
AGAGTGGTATGATTACGATGAGAAGGCGGGAGAGGAGGTTTCGATCAAGG
AGATCAACTTTCAGAAAACCCACTCTGCCTCTATCACTGCCGGCCCCAAC
GTCTACGAGGCGGATGAGAAGCGCACTGCGAAGAAGGTGATTGAGATTGA
CTGCAGAGGATTGGAATTTACCGAGTTTAAGGCTGATGAACAACATGAAA
TCCCCGGTAGTAGGGGCGAGGCGAACTTTGTCTGGAAATGCAAGCTGTGC
CAGCGTCACCGACCTCCGTCCCAAGGACACCGAGGAAGAGCCCTACTACT
TCACTTTCAAAGTGCAATGCACCTCTTGTCGTGAAACCCACCCCAACTGG
GTCAGCTTCAACCGCTTCATGCTTTCCCTCCTCCTGTCTGCCGAACTCAG
CGGGTGTAACAACATCCTCTGGATGGGCTCTGCGGACAGTGTGGAAATGA
CGGACCTGGGACTACGATAGAGTCGGTACCGAGCTCATCATCCGTCTGAA
GTGGGGCCAAACGGAATACAAGGGCAAGCTTGAGAGCATCGATTCGTACA
TGAACGTGCTGCTCCGTGATACGGAAGAGTTCATTGATGGAAAGAACACG
GGAACATTGGGTCTGGTCCTGATTAGTTCAACCCTGTCAACCCCCGGCCT
TTCCTCCAGGCTAGGGTGAGTGGGAAGCGAAGGGAGCTGAGTCTTCTACT
CCTTTCACCGGCATTGATTTGTCAGAGGAAGAGTGGTATGATTACGATGA
GAAGGCGGGAGAGGAGGTTTCGATCAAGGAGATCAACTTTCAGAAAACCC
ACTCTGCCTCTATCACTGCCGGCCCCAACGTCTACGAGGCGGATGAGAAG
CGCACTGCGAAGAAGGTGATTGAGATTGACTGCAGAGGATTGGAATTTAC
CGAGTTTAAGGCTGATGAACAACATGAAATCCCCGGTAGTAGGGGCGAGG
CGAACTTTGTCTGGAAATGCAAGCTGTGCCAGCGTCACCGACCTCCGTCC
CAAGGACACCGAGGAAGAGCCCTACTACTTCACTTTCAAAGTGCAATGCA
CCTCTTGTCGTGAAACCCACCCCAACTGGGTCAGCTTCAACCGCTTCATG
CTTTCCCTCCTCCTGTCTGCCGAACTCAGCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000387spliceosomal snRNP assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007779ATCC10864_007779Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007779-T1ATCC10864_007779-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007779-T1.cdsATCC10864_007779-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007779-T1.exon8ATCC10864_007779-T1.exon8Aspergillus niger ATCC 10864exon
ATCC10864_007779-T1.exon7ATCC10864_007779-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_007779-T1.exon6ATCC10864_007779-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_007779-T1.exon5ATCC10864_007779-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_007779-T1.exon4ATCC10864_007779-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007779-T1.exon3ATCC10864_007779-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007779-T1.exon2ATCC10864_007779-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007779-T1.exon1ATCC10864_007779-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR010920
InterProIPR001163
PFAMPF01423
PFAMPF05907
InterProIPR034100
InterProIPR008584
Properties
Property NameValue
NoteBUSCO:EOG09264X31
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:1307683..1309762 -
Powered by Drupal