You are here

Home

ATCC10864_008048-T1, ATCC10864_008048-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008048-T1
Unique NameATCC10864_008048-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000195:179985..181542-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008048-T1 ID=ATCC10864_008048-T1|Name=ATCC10864_008048-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1558bp|location=Sequence derived from alignment at MCQH01000195:179985..181542- (Aspergillus niger ATCC 10864)
ATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTCAC
CCCCAACTCTCCCAGCAAGGCCGAAGCCTCCAAAGATCCCAACCTCATCA
CCTGGAACAGCCCCAATGACCCAGAAAACCCCAAGAATTGGCCGAGAGGC
CTAAAGTGGCAAAATACCTGGTCGGTTTCGCTTTTCGTCTTCATCTCGCC
CGTGTCGTCATCAATGATCGCCCCGGCCATGAATGATCTCGCGCAGTCGC
TGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTATT
CTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTATA
CGGTCGAGTGCGTTTACTCCAACTCAGCAATGTGTGGTATCTGGCCTGGA
ATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTCGG
TTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATTGGAGGGGGGAC
TATTAGGTGAGTGAATTATATTCAAAGATGGATTTGAATATATATTTTCA
ATCGGCATTTGCACTCCACTGACTTCAACTGGTAGTGATATGTGGTCCGC
GGAAGAACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGG
GGCCTGTGATTGGACCGATTGCGGGCGGGTTCATTGCCGAGTATTCGACC
TGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGT
AGTTGGGGTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTTTACGGA
GGAGACGAGACGTTCTTGCTAAGGAAACAGGAAATGAGGAGCTTCATACC
GCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCG
GCCGGTGCGGATGTTCACGACTCAGCCCATTGTCTTCTGTATAGCGCTTT
ATATGGCCTATCTCTTCGGCGTGACGTACATGATGTTTGCGACCTTCCCG
GATATCTGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAA
TTATCTCTCCATCGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCA
AGCTCGTGGACCGTATCTACAGGACTCTCAAAGCCCGGAACAATAATATA
GGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAG
TACTATCGGGCTCTTCTGGTATGGTTGGAGCATTGGGAATACCCATTGGA
TTATGCCGAATATCGGTGCGCTGATTTACACCATGGGCACCATCTCCTGC
CTGCAGGGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGC
TAGCGCTATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGAT
TCCCGCTGTTTGCTCCCTATATGTATAACGCCCTGGGGTATGGTTGGGGC
ACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTT
TGTTTTCTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCT
CTGGTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000195:179985..181542-

>ATCC10864_008048-T1 ID=ATCC10864_008048-T1|Name=ATCC10864_008048-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2958bp|location=Sequence derived from alignment at MCQH01000195:179985..181542- (Aspergillus niger ATCC 10864)
TGATATGTGGTCCGCGGAAGAACGGGGGAAAGCTATGGGGGTGTATACTC
TGGGGCCATTACTGGGGCCTGTGATTGGACCGATTGCGGGCGGGTTCATT
GCCGAGTATTCGACCTGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGC
TGTCGCAGTGCAGGTAGTTGGGGTTTTCTGGTTGAGAGAGTGCCATCCGG
GGACGATTTTACGGAGGAGACGAGACGTTCTTGCTAAGGAAACAGGAAAT
GAGGAGCTTCATACCGCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCT
TCATGCGTTTGAGCGGCCGGTGCGGATGTTCACGACTCAGCCCATTGTCT
TCTGTATAGCGCTTTATATGGCCTATCTCTTCGGCGTGACGTACATGATG
TTTGCGACCTTCCCGGATATCTGGACCGACGTCTACCACGAGAGCTCTGG
GATTGGGGGCCTCAATTATCTCTCCATCGCGATTGGAGCGTTCATCGGGC
TCTTCTTTAACCTCAAGCTCGTGGACCGTATCTACAGGACTCTCAAAGCC
CGGAACAATAATATAGGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGT
GGGCTCGATCATCAGTACTATCGGGCTCTTCTGGTATGGTTGGAGCATTG
GGAATACCCATTGGATTATGCCGAATATCGGTGCGCTGATTTACACCATG
GGCACCATCTCCTGCCTGCAGGGCATGCAGACGTATATTGTTGACAGCTA
TCAAACCTACGCAGCTAGCGCTATGGCTGCCTGTGCCGTGCTGAGGAGTT
TGTGCGGCTTCGGATTCCCGCTGTTTGCTCCCTATATGTATAACGCCCTG
GGGTATGGTTGGGGCACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGG
ATGGGGAGGGCCGTTTGTTTTCTGGAAATACGGGCCCCGGTTGCGTGCCA
TGTCTGAATATGCCTCTGGTTGAATGGCATCCAACCAAGACCAAGACCTC
GAAGCATGCCCCAAAACCCTCACCCCCAACTCTCCCAGCAAGGCCGAAGC
CTCCAAAGATCCCAACCTCATCACCTGGAACAGCCCCAATGACCCAGAAA
ACCCCAAGAATTGGCCGAGAGGCCTAAAGTGGCAAAATACCTGGTCGGTT
TCGCTTTTCGTCTTCATCTCGCCCGTGTCGTCATCAATGATCGCCCCGGC
CATGAATGATCTCGCGCAGTCGCTGGACATGCATGCGGAAATTGAGATAT
ATCTTTCATTGAGTATCTTTATTCTCGCGTATGCCATCGGCCCTGTTTTC
TTTGGTCCGGCGTCGGAATTATACGGTCGAGTGCGTTTACTCCAACTCAG
CAATGTGTGGTATCTGGCCTGGAATCTGGGATGCGGGTTCGCGAGGACGA
AGGGACAGCTTTTTGCGTTTCGGTTTTTGGCGGGGATTGGGGGGAGTGCG
CCGCTGGCTATTGGAGGGGGGACTATTAGTGATATGTGGTCCGCGGAAGA
ACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGGGGCCTG
TGATTGGACCGATTGCGGGCGGGTTCATTGCCGAGTATTCGACCTGGCGA
TGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGTAGTTGG
GGTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTTTACGGAGGAGAC
GAGACGTTCTTGCTAAGGAAACAGGAAATGAGGAGCTTCATACCGCGGAG
AAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCGGCCGGT
GCGGATGTTCACGACTCAGCCCATTGTCTTCTGTATAGCGCTTTATATGG
CCTATCTCTTCGGCGTGACGTACATGATGTTTGCGACCTTCCCGGATATC
TGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAATTATCT
CTCCATCGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCAAGCTCG
TGGACCGTATCTACAGGACTCTCAAAGCCCGGAACAATAATATAGGCAAA
CCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAGTACTAT
CGGGCTCTTCTGGTATGGTTGGAGCATTGGGAATACCCATTGGATTATGC
CGAATATCGGTGCGCTGATTTACACCATGGGCACCATCTCCTGCCTGCAG
GGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGCTAGCGC
TATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGATTCCCGC
TGTTTGCTCCCTATATGTATAACGCCCTGGGGTATGGTTGGGGCACCAGT
GTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTTTGTTTT
CTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCTCTGGTT
GAATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTC
ACCCCCAACTCTCCCAGCAAGGCCGAAGCCTCCAAAGATCCCAACCTCAT
CACCTGGAACAGCCCCAATGACCCAGAAAACCCCAAGAATTGGCCGAGAG
GCCTAAAGTGGCAAAATACCTGGTCGGTTTCGCTTTTCGTCTTCATCTCG
CCCGTGTCGTCATCAATGATCGCCCCGGCCATGAATGATCTCGCGCAGTC
GCTGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTA
TTCTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTA
TACGGTCGAGTGCGTTTACTCCAACTCAGCAATGTGTGGTATCTGGCCTG
GAATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTC
GGTTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATTGGAGGGGGG
ACTATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008048ATCC10864_008048Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008048-T1ATCC10864_008048-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008048-T1.cdsATCC10864_008048-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008048-T1.exon2ATCC10864_008048-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008048-T1.exon1ATCC10864_008048-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000195supercontigMCQH01000195:179985..181542 -
Powered by Drupal