You are here

Home

ATCC10864_008160-T1, ATCC10864_008160-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008160-T1
Unique NameATCC10864_008160-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:329257..330250+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008160-T1 ID=ATCC10864_008160-T1|Name=ATCC10864_008160-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=994bp|location=Sequence derived from alignment at MCQH01000196:329257..330250+ (Aspergillus niger ATCC 10864)
ATGCCATCTGTCGAGATTTCGCTGGCTCCAACCAACATCGAAGCCACCTC
CGACATGATCGATGCAGTGAACGTCCTAAGAGCCAAGAACACCGACCCCG
CAACATCGAAAAATCTATACGACGACTCCGAGTTTGACAAAGCCAAAGAC
AAGACTACCTTCCGCCAATTCAACGATGCTTGTGACCGTGTGAAGAACTT
CTACGCGCAGCAACACACCCTACAAACCGTAGCTTACAACCTGAAAGCCC
GACACAACTTTCACAACAAGACGCGAGCCCATATGACCGTCTGGGAAGCC
ATTGAGAAGCTCAACACCTTCATCGATGAATGTGACCCCGATACCCAGGA
GTCACAGATGACGCACCTTCTTCAGTCTGCTGAAGCAATTCGCCAGGAGG
GAAAGCCGCGCTGGATGCAACTTGTCGGATTGATTCATGATCTGGGAAAG
TTGCTTTTCTTCTTCGGCGCACAGGGTCAGTGGGATGTCGTGGGCGATAC
GTTTCCTGTTGGATGTGCTTTTGATGATCGCATCATTTTTGGTACGGAAT
CTTTCAAAAACAATGAGGACATCAAGAACCCGATCTACAATACCAAGTTT
GGGATCTATTCTCCTGGCTGTGGACTGGAGAATGTCATGCTTTGCTGGGG
TCATGATGAATACTTGTATCACATTGTCAAAGATCAGTCGACTATTCCTG
ATGAAGGTCTTGCGATGATCAGATATCACTCGTTCTATCCCTGGCACCGG
GAGAATGCTTACCACGAGTTGATGAATGAGCATGATAAGAAAATGCTTGC
GGCGGTGCGGGCTTTTAACCCTTATGATTTGTACAGCAAGAGCGATAGCG
TGCCGGATCCAGTGAAGCTGAAGGTGAGAATACCCAGAGCTCTTCCATGT
GAGGTATTGCCACTAACACTGGTTCTTAAATGAAAAGCCTTACTATCTCG
AGCTGATTGACGAATACTTCCCTAACAAAGTGCTCCGCTGGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000196:329257..330250+

>ATCC10864_008160-T1 ID=ATCC10864_008160-T1|Name=ATCC10864_008160-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1860bp|location=Sequence derived from alignment at MCQH01000196:329257..330250+ (Aspergillus niger ATCC 10864)
ATGCCATCTGTCGAGATTTCGCTGGCTCCAACCAACATCGAAGCCACCTC
CGACATGATCGATGCAGTGAACGTCCTAAGAGCCAAGAACACCGACCCCG
CAACATCGAAAAATCTATACGACGACTCCGAGTTTGACAAAGCCAAAGAC
AAGACTACCTTCCGCCAATTCAACGATGCTTGTGACCGTGTGAAGAACTT
CTACGCGCAGCAACACACCCTACAAACCGTAGCTTACAACCTGAAAGCCC
GACACAACTTTCACAACAAGACGCGAGCCCATATGACCGTCTGGGAAGCC
ATTGAGAAGCTCAACACCTTCATCGATGAATGTGACCCCGATACCCAGGA
GTCACAGATGACGCACCTTCTTCAGTCTGCTGAAGCAATTCGCCAGGAGG
GAAAGCCGCGCTGGATGCAACTTGTCGGATTGATTCATGATCTGGGAAAG
TTGCTTTTCTTCTTCGGCGCACAGGGTCAGTGGGATGTCGTGGGCGATAC
GTTTCCTGTTGGATGTGCTTTTGATGATCGCATCATTTTTGGTACGGAAT
CTTTCAAAAACAATGAGGACATCAAGAACCCGATCTACAATACCAAGTTT
GGGATCTATTCTCCTGGCTGTGGACTGGAGAATGTCATGCTTTGCTGGGG
TCATGATGAATACTTGTATCACATTGTCAAAGATCAGTCGACTATTCCTG
ATGAAGGTCTTGCGATGATCAGATATCACTCGTTCTATCCCTGGCACCGG
GAGAATGCTTACCACGAGTTGATGAATGAGCATGATAAGAAAATGCTTGC
GGCGGTGCGGGCTTTTAACCCTTATGATTTGTACAGCAAGAGCGATAGCG
TGCCGGATCCAGTGAAGCTGAAGCCTTACTATCTCGAGCTGATTGACGAA
TACTTCCCTAACAAAGTGCTCCGCTGGTAAATGCCATCTGTCGAGATTTC
GCTGGCTCCAACCAACATCGAAGCCACCTCCGACATGATCGATGCAGTGA
ACGTCCTAAGAGCCAAGAACACCGACCCCGCAACATCGAAAAATCTATAC
GACGACTCCGAGTTTGACAAAGCCAAAGACAAGACTACCTTCCGCCAATT
CAACGATGCTTGTGACCGTGTGAAGAACTTCTACGCGCAGCAACACACCC
TACAAACCGTAGCTTACAACCTGAAAGCCCGACACAACTTTCACAACAAG
ACGCGAGCCCATATGACCGTCTGGGAAGCCATTGAGAAGCTCAACACCTT
CATCGATGAATGTGACCCCGATACCCAGGAGTCACAGATGACGCACCTTC
TTCAGTCTGCTGAAGCAATTCGCCAGGAGGGAAAGCCGCGCTGGATGCAA
CTTGTCGGATTGATTCATGATCTGGGAAAGTTGCTTTTCTTCTTCGGCGC
ACAGGGTCAGTGGGATGTCGTGGGCGATACGTTTCCTGTTGGATGTGCTT
TTGATGATCGCATCATTTTTGGTACGGAATCTTTCAAAAACAATGAGGAC
ATCAAGAACCCGATCTACAATACCAAGTTTGGGATCTATTCTCCTGGCTG
TGGACTGGAGAATGTCATGCTTTGCTGGGGTCATGATGAATACTTGTATC
ACATTGTCAAAGATCAGTCGACTATTCCTGATGAAGGTCTTGCGATGATC
AGATATCACTCGTTCTATCCCTGGCACCGGGAGAATGCTTACCACGAGTT
GATGAATGAGCATGATAAGAAAATGCTTGCGGCGGTGCGGGCTTTTAACC
CTTATGATTTGTACAGCAAGAGCGATAGCGTGCCGGATCCAGTGAAGCTG
AAGCCTTACTATCTCGAGCTGATTGACGAATACTTCCCTAACAAAGTGCT
CCGCTGGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019310inositol catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0050113inositol oxygenase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008160ATCC10864_008160Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008160-T1.exon1ATCC10864_008160-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008160-T1.exon2ATCC10864_008160-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008160-T1.cdsATCC10864_008160-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008160-T1ATCC10864_008160-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007828
PFAMPF05153
Properties
Property NameValue
NoteantiSMASH:Cluster_1000196.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:329257..330250 +
Powered by Drupal