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ATCC10864_008214-T1, ATCC10864_008214-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008214-T1
Unique NameATCC10864_008214-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:474851..476520+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008214-T1 ID=ATCC10864_008214-T1|Name=ATCC10864_008214-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1670bp|location=Sequence derived from alignment at MCQH01000196:474851..476520+ (Aspergillus niger ATCC 10864)
ATGCATCAAGTGTTGAAAGAGGATGGTACTACAGTGGAGCATGATGAGAG
AGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGG
ATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC
CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATC
AGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGA
GTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT
GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATG
GGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGA
CCTCGGCCCAAAATTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT
ATTGGGGTTGGTACACTGGCTATGGTATGGATGAATCTCCGGCCGAATGC
AACATATTGCTTGCTAATATATCTGGCTACTAGGGCGCACCGCTTTATAT
CTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAAT
CCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGC
ATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCA
GATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACT
CACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGT
CTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGA
ATACAACGCAATTATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAAC
AACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATG
GACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAGTCGGCGTGGGTGT
AGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGC
CCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCTTG
TCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTT
AACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCC
TGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGG
CCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTT
TCTTTACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCT
TGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTA
TCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCC
GGTGATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGT
GCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACC
GGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACA
AGCACACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGG
AAGGGAGGCTTGACGTGTGA
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Coding sequence (CDS) from alignment at MCQH01000196:474851..476520+

>ATCC10864_008214-T1 ID=ATCC10864_008214-T1|Name=ATCC10864_008214-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3222bp|location=Sequence derived from alignment at MCQH01000196:474851..476520+ (Aspergillus niger ATCC 10864)
ATGCATCAAGTGTTGAAAGAGGATGGTACTACAGTGGAGCATGATGAGAG
AGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTCATATGGCCCGG
ATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC
CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATC
AGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGA
GTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT
GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATG
GGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGA
CCTCGGCCCAAAATTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT
ATTGGGGTTGGTACACTGGCTATGGGCGCACCGCTTTATATCTCAGAAAT
TTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAATCCATTTGCC
TCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTA
GTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAG
TGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACTCACCACGGT
GGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGG
CTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGAATACAACGC
AATTATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAACAACAGCGCC
CGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATGGACCTATTC
AGGCCGCAGACCTGGAAGAGGACAGCAGTCGGCGTGGGTGTAGGGTTTTT
CCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGCCCACGCTTT
TCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTA
TTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTTAACAATCGA
CAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCCTGATGGGAG
CCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGG
GCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACAT
CCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCTTGCCTTCTG
AGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGC
GTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCCGGTGATGAT
GGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGTGCTGTGTTC
TCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACA
CTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACAAGCACACCA
TGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGGAAGGGAGGC
TTGACGTGTGAATGCATCAAGTGTTGAAAGAGGATGGTACTACAGTGGAG
CATGATGAGAGAGGCACCCTTGGTGTTGAAGCGGTGGATATGCTGCCCTC
ATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTG
GAGCCGCCTGCCTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAG
GGAGTCATATCAGTCATCAATGTCATGCCACAATTCCATGCGGCTATCCC
GCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCC
TCGGGGCATTTGTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATC
TCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATTTTTGACATTGGGGC
CGTTATCCAGACCTCGGCCCAAAATTACGGCATGCTGGTTGCCGGAAGAG
CAATTGGTGGTATTGGGGTTGGTACACTGGCTATGGGCGCACCGCTTTAT
ATCTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGA
ATCCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCG
GCATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTG
CAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATA
CTCACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGA
GTCTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCT
GAATACAACGCAATTATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACA
ACAACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGA
TGGACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAGTCGGCGTGGGT
GTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGC
GCCCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCT
TGTCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTC
TTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTT
CCTGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATG
GGCCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCC
TTTCTTTACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGC
CTTGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGT
TATCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACT
CCGGTGATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGC
GTGCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAA
CCGGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAA
CAAGCACACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGG
GGAAGGGAGGCTTGACGTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008214ATCC10864_008214Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008214-T1.exon1ATCC10864_008214-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008214-T1.exon2ATCC10864_008214-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008214-T1.cdsATCC10864_008214-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008214-T1ATCC10864_008214-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
PFAMPF00083
InterProIPR020846
InterProIPR005828
InterProIPR003663
InterProIPR005829
Properties
Property NameValue
NoteSMCOG1169:sugar transport protein
NoteantiSMASH:Cluster_1000196.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:474851..476520 +
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