You are here

Home

ATCC10864_008224-T1, ATCC10864_008224-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008224-T1
Unique NameATCC10864_008224-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000196:527222..528125-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008224-T1 ID=ATCC10864_008224-T1|Name=ATCC10864_008224-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=904bp|location=Sequence derived from alignment at MCQH01000196:527222..528125- (Aspergillus niger ATCC 10864)
ATGTTTATTCCAGACGAGCACTCATTCAAAAATTCAGAACCACGGAGATA
TTGCGAGCAGCACATCACTTTGGGGGTCCGTCCCTGAGACGATTCGTGCT
TCTTGGTAGTGCTGTCTCGGTGCTAAACTCCTTTGAAGATCTACCTAGAC
AAGGAAGGCCCTATACGGAGAAAGATTGGAATCCATTTAGTGCCTCGAAG
GAGGATATATGCCTGCGATTTGACACCCATCCAGGCGACCGCTGAGCAAG
CTGTCGCACGGAATGGCACCGTCCCGGGCTATAACGTCTCCAACACTCGC
GCTGAGGCAGCTGCGTGGCAATTTATGGAAAAGGCTAAACCAGGATTTGA
CTTGACCGGCATAAATCCGGATATCATCACCGGGCCCATGATTCACCCTA
TACATGGACCAAAGTCCATCAATGAAACAAAACATTTCGCGATCGCAAGC
TTCAATGATGGAACTCACAAGCGAATCGAAGGCGTTACATTTCTATTTTA
CCATTTCGTATGTTTCAAGGCATCGGTAAGAGGTTCGTTGCATAGAAGCA
GAGGACTGACTGCAGTTTCAGGTCGATGTCCGTGACGTTGCCCGTAGTCA
TGTCGATGCCCTCAAAAACCCGGCAGCGGCAAACCAGCACGTTCTTCTCA
TTGCAGGACTCATATCACCACAGCTTGTGGTCAACACCATTCGGCAAAAC
TTCCCTTCTCTTAAAGATAGAGTTCCTGAGGGAAACCCAAGCCAGGTCTT
GCCTTCAGATGTCCACCCGACTGGGTGGGACACACGGATTAGTCTAGACA
TCCTGGCAAAGGGGTCCCGCGATGGAAGACAGGAATATATCGAATTGGAG
AAAAGTATTATCGACGCGGTCAATATGATACTGCCCATTGGTATTTTGGG
TTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000196:527222..528125-

>ATCC10864_008224-T1 ID=ATCC10864_008224-T1|Name=ATCC10864_008224-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2331bp|location=Sequence derived from alignment at MCQH01000196:527222..528125- (Aspergillus niger ATCC 10864)
GTCGATGTCCGTGACGTTGCCCGTAGTCATGTCGATGCCCTCAAAAACCC
GGCAGCGGCAAACCAGCACGTTCTTCTCATTGCAGGACTCATATCACCAC
AGCTTGTGGTCAACACCATTCGGCAAAACTTCCCTTCTCTTAAAGATAGA
GTTCCTGAGGGAAACCCAAGCCAGGTCTTGCCTTCAGATGTCCACCCGAC
TGGGTGGGACACACGGATTAGTCTAGACATCCTGGCAAAGGGGTCCCGCG
ATGGAAGACAGGAATATATCGAATTGGAGAAAAGTATTATCGACGCGGTC
AATATGATACTGCCCATTGGTATTTTGGGTTAGATCTACCTAGACAAGGA
AGGCCCTATACGGAGAAAGATTGGAATCCATTTAGTGCCTCGAAGGAGGA
TATATGCCTGCGATTTGACACCCATCCAGGCGACCGCTGAGCAAGCTGTC
GCACGGAATGGCACCGTCCCGGGCTATAACGTCTCCAACACTCGCGCTGA
GGCAGCTGCGTGGCAATTTATGGAAAAGGCTAAACCAGGATTTGACTTGA
CCGGCATAAATCCGGATATCATCACCGGGCCCATGATTCACCCTATACAT
GGACCAAAGTCCATCAATGAAACAAAACATTTCGCGATCGCAAGCTTCAA
TGATGGAACTCACAAGCGAATCGAAGGCGTTACATTTCTATTTTACCATT
TCATGTTTATTCCAGACGAGCACTCATTCAAAAATTCAGAACCACGGAGA
TATTGCGAGCAGCACATCACTTTGGGGGTCGATGTCCGTGACGTTGCCCG
TAGTCATGTCGATGCCCTCAAAAACCCGGCAGCGGCAAACCAGCACGTTC
TTCTCATTGCAGGACTCATATCACCACAGCTTGTGGTCAACACCATTCGG
CAAAACTTCCCTTCTCTTAAAGATAGAGTTCCTGAGGGAAACCCAAGCCA
GGTCTTGCCTTCAGATGTCCACCCGACTGGGTGGGACACACGGATTAGTC
TAGACATCCTGGCAAAGGGGTCCCGCGATGGAAGACAGGAATATATCGAA
TTGGAGAAAAGTATTATCGACGCGGTCAATATGATACTGCCCATTGGTAT
TTTGGGTTAGATCTACCTAGACAAGGAAGGCCCTATACGGAGAAAGATTG
GAATCCATTTAGTGCCTCGAAGGAGGATATATGCCTGCGATTTGACACCC
ATCCAGGCGACCGCTGAGCAAGCTGTCGCACGGAATGGCACCGTCCCGGG
CTATAACGTCTCCAACACTCGCGCTGAGGCAGCTGCGTGGCAATTTATGG
AAAAGGCTAAACCAGGATTTGACTTGACCGGCATAAATCCGGATATCATC
ACCGGGCCCATGATTCACCCTATACATGGACCAAAGTCCATCAATGAAAC
AAAACATTTCGCGATCGCAAGCTTCAATGATGGAACTCACAAGCGAATCG
AAGGCGTTACATTTCTATTTTACCATTTCATGTTTATTCCAGACGAGCAC
TCATTCAAAAATTCAGAACCACGGAGATATTGCGAGCAGCACATCACTTT
GGGGGTCGATGTCCGTGACGTTGCCCGTAGTCATGTCGATGCCCTCAAAA
ACCCGGCAGCGGCAAACCAGCACGTTCTTCTCATTGCAGGACTCATATCA
CCACAGCTTGTGGTCAACACCATTCGGCAAAACTTCCCTTCTCTTAAAGA
TAGAGTTCCTGAGGGAAACCCAAGCCAGGTCTTGCCTTCAGATGTCCACC
CGACTGGGTGGGACACACGGATTAGTCTAGACATCCTGGCAAAGGGGTCC
CGCGATGGAAGACAGGAATATATCGAATTGGAGAAAAGTATTATCGACGC
GGTCAATATGATACTGCCCATTGGTATTTTGGGTTAGATCTACCTAGACA
AGGAAGGCCCTATACGGAGAAAGATTGGAATCCATTTAGTGCCTCGAAGG
AGGATATATGCCTGCGATTTGACACCCATCCAGGCGACCGCTGAGCAAGC
TGTCGCACGGAATGGCACCGTCCCGGGCTATAACGTCTCCAACACTCGCG
CTGAGGCAGCTGCGTGGCAATTTATGGAAAAGGCTAAACCAGGATTTGAC
TTGACCGGCATAAATCCGGATATCATCACCGGGCCCATGATTCACCCTAT
ACATGGACCAAAGTCCATCAATGAAACAAAACATTTCGCGATCGCAAGCT
TCAATGATGGAACTCACAAGCGAATCGAAGGCGTTACATTTCTATTTTAC
CATTTCATGTTTATTCCAGACGAGCACTCATTCAAAAATTCAGAACCACG
GAGATATTGCGAGCAGCACATCACTTTGGGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008224ATCC10864_008224Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008224-T1ATCC10864_008224-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008224-T1.cdsATCC10864_008224-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008224-T1.exon3ATCC10864_008224-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008224-T1.exon2ATCC10864_008224-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008224-T1.exon1ATCC10864_008224-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036291
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000196supercontigMCQH01000196:527222..528125 -
Powered by Drupal