You are here

Home

ATCC10864_008390-T1, ATCC10864_008390-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008390-T1
Unique NameATCC10864_008390-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:527084..528126+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008390-T1 ID=ATCC10864_008390-T1|Name=ATCC10864_008390-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1043bp|location=Sequence derived from alignment at MCQH01000199:527084..528126+ (Aspergillus niger ATCC 10864)
ATGTCCGAGCGAAAGGTCCTCACGTAAGTCACACCCACAACATCTGAAAG
ACAACCACAGCAACTAACATAACCTCATATGTAAAGGAAATACTACCCCC
CGGATTTCGATCCCAGCGCTATCACGCGCACACCAAAGCACCTGCGCCAG
TGAGTACCCTCTACCCTGGGATACAAATATCACAATACCCTCTAACCGAA
AGCTTCACAGACAAGGTCCCAAAGTAATAACCGTCCGCCTCATGGCCCCC
TTCTCCATGAAATGCACGAAATGCGGTACGTTCCCCCGTCCCCATCCCCA
TCCCGACACCCCCTCTTGAAACTCATCCTAACATAAATTACTACTTCGCA
GGAGAATTCATCTACAAGGGCCGCAAATTCAACGCGCGCAAAGAAACCAC
ATCCGAAAAATACTTCTCCATCCCAATCTACCGGTTCTACATCCGCTGCA
CGCGATGCAGCGGCGAAATCACCTTCCTGACGGACCCGAAGAACATGGAT
TACCGGGCAGAGCGGGGCGCGAAGCGCAATTTCGAGCCATGGCGGGACAG
AAGCAAAGCGGAGGAGACGGCGGAGGAGACAGAGGAGCAGGTGCTTGATC
GATTGGAGCGGGAGGAAGGGGAAAACATGGAGCAGGAGGAGAGGGATAAG
ATGGCAGAGTTGGAGGAGAAGATGCTGGATTCGAAGCGGGAGATGGCGAT
TGCGGATGCGTTGGATGAGATAAGGACGCGGAATGCGAGGATTGAGAGGG
GTGGTGCTGGGGGGGAGGTGGCGTTGGGGGCGGTGAGGGAGGAGAAGGAT
GAGGAGGCGGAGAGAGTGGAGAGGGAGATTGAAGAGGTGGCGAGGAGGGC
GTTTAGGACGGAGGAGGGCGAGAAGGTTAGGAGGTTGGTTGAGGATGATG
AGAGTCCTGATAATGGGGTGGGTGGCAGTGGTGCTGGGGAGATGCCGCCG
CCGCCGCCTTCGTTTGCGAGGGTGAAGAAAGCGAAGAAGCCTGCTGTGAA
TAGTTTGGGGATCAAGAAGAAGGCGAAGCCGTCGTTGGTATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000199:527084..528126+

>ATCC10864_008390-T1 ID=ATCC10864_008390-T1|Name=ATCC10864_008390-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3372bp|location=Sequence derived from alignment at MCQH01000199:527084..528126+ (Aspergillus niger ATCC 10864)
ATGTCCGAGCGAAAGGTCCTCACGAAATACTACCCCCCGGATTTCGATCC
CAGCGCTATCACGCGCACACCAAAGCACCTGCGCCAACAAGGTCCCAAAG
TAATAACCGTCCGCCTCATGGCCCCCTTCTCCATGAAATGCACGAAATGC
GGAGAATTCATCTACAAGGGCCGCAAATTCAACGCGCGCAAAGAAACCAC
ATCCGAAAAATACTTCTCCATCCCAATCTACCGGTTCTACATCCGCTGCA
CGCGATGCAGCGGCGAAATCACCTTCCTGACGGACCCGAAGAACATGGAT
TACCGGGCAGAGCGGGGCGCGAAGCGCAATTTCGAGCCATGGCGGGACAG
AAGCAAAGCGGAGGAGACGGCGGAGGAGACAGAGGAGCAGGTGCTTGATC
GATTGGAGCGGGAGGAAGGGGAAAACATGGAGCAGGAGGAGAGGGATAAG
ATGGCAGAGTTGGAGGAGAAGATGCTGGATTCGAAGCGGGAGATGGCGAT
TGCGGATGCGTTGGATGAGATAAGGACGCGGAATGCGAGGATTGAGAGGG
GTGGTGCTGGGGGGGAGGTGGCGTTGGGGGCGGTGAGGGAGGAGAAGGAT
GAGGAGGCGGAGAGAGTGGAGAGGGAGATTGAAGAGGTGGCGAGGAGGGC
GTTTAGGACGGAGGAGGGCGAGAAGGTTAGGAGGTTGGTTGAGGATGATG
AGAGTCCTGATAATGGGGTGGGTGGCAGTGGTGCTGGGGAGATGCCGCCG
CCGCCGCCTTCGTTTGCGAGGGTGAAGAAAGCGAAGAAGCCTGCTGTGAA
TAGTTTGGGGATCAAGAAGAAGGCGAAGCCGTCGTTGGTATAGATGTCCG
AGCGAAAGGTCCTCACGAAATACTACCCCCCGGATTTCGATCCCAGCGCT
ATCACGCGCACACCAAAGCACCTGCGCCAACAAGGTCCCAAAGTAATAAC
CGTCCGCCTCATGGCCCCCTTCTCCATGAAATGCACGAAATGCGGAGAAT
TCATCTACAAGGGCCGCAAATTCAACGCGCGCAAAGAAACCACATCCGAA
AAATACTTCTCCATCCCAATCTACCGGTTCTACATCCGCTGCACGCGATG
CAGCGGCGAAATCACCTTCCTGACGGACCCGAAGAACATGGATTACCGGG
CAGAGCGGGGCGCGAAGCGCAATTTCGAGCCATGGCGGGACAGAAGCAAA
GCGGAGGAGACGGCGGAGGAGACAGAGGAGCAGGTGCTTGATCGATTGGA
GCGGGAGGAAGGGGAAAACATGGAGCAGGAGGAGAGGGATAAGATGGCAG
AGTTGGAGGAGAAGATGCTGGATTCGAAGCGGGAGATGGCGATTGCGGAT
GCGTTGGATGAGATAAGGACGCGGAATGCGAGGATTGAGAGGGGTGGTGC
TGGGGGGGAGGTGGCGTTGGGGGCGGTGAGGGAGGAGAAGGATGAGGAGG
CGGAGAGAGTGGAGAGGGAGATTGAAGAGGTGGCGAGGAGGGCGTTTAGG
ACGGAGGAGGGCGAGAAGGTTAGGAGGTTGGTTGAGGATGATGAGAGTCC
TGATAATGGGGTGGGTGGCAGTGGTGCTGGGGAGATGCCGCCGCCGCCGC
CTTCGTTTGCGAGGGTGAAGAAAGCGAAGAAGCCTGCTGTGAATAGTTTG
GGGATCAAGAAGAAGGCGAAGCCGTCGTTGGTATAGATGTCCGAGCGAAA
GGTCCTCACGAAATACTACCCCCCGGATTTCGATCCCAGCGCTATCACGC
GCACACCAAAGCACCTGCGCCAACAAGGTCCCAAAGTAATAACCGTCCGC
CTCATGGCCCCCTTCTCCATGAAATGCACGAAATGCGGAGAATTCATCTA
CAAGGGCCGCAAATTCAACGCGCGCAAAGAAACCACATCCGAAAAATACT
TCTCCATCCCAATCTACCGGTTCTACATCCGCTGCACGCGATGCAGCGGC
GAAATCACCTTCCTGACGGACCCGAAGAACATGGATTACCGGGCAGAGCG
GGGCGCGAAGCGCAATTTCGAGCCATGGCGGGACAGAAGCAAAGCGGAGG
AGACGGCGGAGGAGACAGAGGAGCAGGTGCTTGATCGATTGGAGCGGGAG
GAAGGGGAAAACATGGAGCAGGAGGAGAGGGATAAGATGGCAGAGTTGGA
GGAGAAGATGCTGGATTCGAAGCGGGAGATGGCGATTGCGGATGCGTTGG
ATGAGATAAGGACGCGGAATGCGAGGATTGAGAGGGGTGGTGCTGGGGGG
GAGGTGGCGTTGGGGGCGGTGAGGGAGGAGAAGGATGAGGAGGCGGAGAG
AGTGGAGAGGGAGATTGAAGAGGTGGCGAGGAGGGCGTTTAGGACGGAGG
AGGGCGAGAAGGTTAGGAGGTTGGTTGAGGATGATGAGAGTCCTGATAAT
GGGGTGGGTGGCAGTGGTGCTGGGGAGATGCCGCCGCCGCCGCCTTCGTT
TGCGAGGGTGAAGAAAGCGAAGAAGCCTGCTGTGAATAGTTTGGGGATCA
AGAAGAAGGCGAAGCCGTCGTTGGTATAGATGTCCGAGCGAAAGGTCCTC
ACGAAATACTACCCCCCGGATTTCGATCCCAGCGCTATCACGCGCACACC
AAAGCACCTGCGCCAACAAGGTCCCAAAGTAATAACCGTCCGCCTCATGG
CCCCCTTCTCCATGAAATGCACGAAATGCGGAGAATTCATCTACAAGGGC
CGCAAATTCAACGCGCGCAAAGAAACCACATCCGAAAAATACTTCTCCAT
CCCAATCTACCGGTTCTACATCCGCTGCACGCGATGCAGCGGCGAAATCA
CCTTCCTGACGGACCCGAAGAACATGGATTACCGGGCAGAGCGGGGCGCG
AAGCGCAATTTCGAGCCATGGCGGGACAGAAGCAAAGCGGAGGAGACGGC
GGAGGAGACAGAGGAGCAGGTGCTTGATCGATTGGAGCGGGAGGAAGGGG
AAAACATGGAGCAGGAGGAGAGGGATAAGATGGCAGAGTTGGAGGAGAAG
ATGCTGGATTCGAAGCGGGAGATGGCGATTGCGGATGCGTTGGATGAGAT
AAGGACGCGGAATGCGAGGATTGAGAGGGGTGGTGCTGGGGGGGAGGTGG
CGTTGGGGGCGGTGAGGGAGGAGAAGGATGAGGAGGCGGAGAGAGTGGAG
AGGGAGATTGAAGAGGTGGCGAGGAGGGCGTTTAGGACGGAGGAGGGCGA
GAAGGTTAGGAGGTTGGTTGAGGATGATGAGAGTCCTGATAATGGGGTGG
GTGGCAGTGGTGCTGGGGAGATGCCGCCGCCGCCGCCTTCGTTTGCGAGG
GTGAAGAAAGCGAAGAAGCCTGCTGTGAATAGTTTGGGGATCAAGAAGAA
GGCGAAGCCGTCGTTGGTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008390ATCC10864_008390Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008390-T1.exon1ATCC10864_008390-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008390-T1.exon2ATCC10864_008390-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008390-T1.exon3ATCC10864_008390-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008390-T1.exon4ATCC10864_008390-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008390-T1.cdsATCC10864_008390-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008390-T1ATCC10864_008390-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR043701
InterProIPR007590
PFAMPF04502
Properties
Property NameValue
NoteantiSMASH:Cluster_1000199.4
NoteBUSCO:EOG092655M5
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:527084..528126 +
Powered by Drupal